EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000011612 (Gene tree)
Gene ID: 109517641
Gene Symbol: zfat
Alias: -
Full Name: zinc finger and AT-hook domain containing
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 8006 bases
Position: chrKV880006.1:1184357-1192362
Accession: 109517641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009218	zf-C2H2	PF00096.26	3.3e-34	1	5
ENSHCOP00000009218	zf-C2H2	PF00096.26	3.3e-34	2	5
ENSHCOP00000009218	zf-C2H2	PF00096.26	3.3e-34	3	5
ENSHCOP00000009218	zf-C2H2	PF00096.26	3.3e-34	4	5
ENSHCOP00000009218	zf-C2H2	PF00096.26	3.3e-34	5	5
ENSHCOP00000009218	zf-met	PF12874.7	0.0004	1	2
ENSHCOP00000009218	zf-met	PF12874.7	0.0004	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015295	-	3184	XM_019872926	ENSHCOP00000009218	959 (aa)	XP_019728485	-

Gene Model

Click here to download ENSHCOG00000011612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000011612	zfat	60	31.383	ENSHCOG00000001245	-	76	31.383
ENSHCOG00000011612	zfat	53	45.312	ENSHCOG00000009009	-	79	38.462
ENSHCOG00000011612	zfat	57	41.964	ENSHCOG00000001242	-	63	41.964
ENSHCOG00000011612	zfat	65	38.938	ENSHCOG00000001338	-	88	38.938
ENSHCOG00000011612	zfat	66	30.675	ENSHCOG00000000800	-	88	30.675
ENSHCOG00000011612	zfat	55	33.835	ENSHCOG00000001423	-	64	31.414
ENSHCOG00000011612	zfat	56	41.964	ENSHCOG00000020879	-	64	31.222
ENSHCOG00000011612	zfat	63	34.545	ENSHCOG00000008234	-	72	34.545
ENSHCOG00000011612	zfat	57	31.818	ENSHCOG00000001638	-	73	31.818
ENSHCOG00000011612	zfat	54	33.533	ENSHCOG00000001631	-	55	33.533
ENSHCOG00000011612	zfat	61	30.709	ENSHCOG00000015639	znf319b	87	30.709
ENSHCOG00000011612	zfat	56	33.051	ENSHCOG00000014786	-	94	33.051
ENSHCOG00000011612	zfat	63	34.234	ENSHCOG00000000627	-	66	34.234
ENSHCOG00000011612	zfat	86	32.389	ENSHCOG00000007664	-	98	32.389
ENSHCOG00000011612	zfat	54	40.984	ENSHCOG00000013489	-	93	31.847
ENSHCOG00000011612	zfat	63	31.915	ENSHCOG00000011432	-	74	31.915
ENSHCOG00000011612	zfat	60	32.738	ENSHCOG00000011433	-	76	32.738
ENSHCOG00000011612	zfat	87	32.487	ENSHCOG00000014713	-	99	30.851
ENSHCOG00000011612	zfat	82	36.429	ENSHCOG00000001252	-	97	36.429
ENSHCOG00000011612	zfat	54	39.326	ENSHCOG00000012592	-	54	39.326
ENSHCOG00000011612	zfat	59	47.458	ENSHCOG00000007485	-	95	47.458
ENSHCOG00000011612	zfat	57	44.643	ENSHCOG00000013455	-	91	32.275
ENSHCOG00000011612	zfat	55	30.317	ENSHCOG00000021073	-	85	30.317
ENSHCOG00000011612	zfat	60	32.420	ENSHCOG00000015441	-	68	32.420
ENSHCOG00000011612	zfat	61	35.632	ENSHCOG00000014881	-	70	35.632
ENSHCOG00000011612	zfat	56	34.483	ENSHCOG00000015010	-	58	34.483
ENSHCOG00000011612	zfat	60	33.193	ENSHCOG00000007990	-	71	33.193
ENSHCOG00000011612	zfat	54	32.365	ENSHCOG00000017437	-	56	32.365
ENSHCOG00000011612	zfat	69	31.349	ENSHCOG00000017431	zbtb24	54	31.349
ENSHCOG00000011612	zfat	56	32.719	ENSHCOG00000019497	-	78	33.488
ENSHCOG00000011612	zfat	67	31.980	ENSHCOG00000015497	-	98	31.980
ENSHCOG00000011612	zfat	65	33.195	ENSHCOG00000019512	-	96	33.195
ENSHCOG00000011612	zfat	55	30.588	ENSHCOG00000008181	-	68	30.588
ENSHCOG00000011612	zfat	55	32.114	ENSHCOG00000001238	-	92	32.114
ENSHCOG00000011612	zfat	57	31.308	ENSHCOG00000021028	-	94	39.241
ENSHCOG00000011612	zfat	54	47.368	ENSHCOG00000008550	-	55	47.368
ENSHCOG00000011612	zfat	65	31.220	ENSHCOG00000008133	-	66	31.220
ENSHCOG00000011612	zfat	69	30.097	ENSHCOG00000000517	-	85	30.097
ENSHCOG00000011612	zfat	59	49.123	ENSHCOG00000001308	-	69	49.123
ENSHCOG00000011612	zfat	59	32.727	ENSHCOG00000015425	-	91	32.432
ENSHCOG00000011612	zfat	58	38.136	ENSHCOG00000001272	-	94	31.579
ENSHCOG00000011612	zfat	56	30.542	ENSHCOG00000019541	-	57	30.542
ENSHCOG00000011612	zfat	55	31.718	ENSHCOG00000000138	-	69	31.718
ENSHCOG00000011612	zfat	71	32.127	ENSHCOG00000001883	-	86	32.127
ENSHCOG00000011612	zfat	59	49.057	ENSHCOG00000008742	-	78	49.057
ENSHCOG00000011612	zfat	55	33.577	ENSHCOG00000020725	-	63	34.483
ENSHCOG00000011612	zfat	62	37.500	ENSHCOG00000015241	-	70	37.500
ENSHCOG00000011612	zfat	55	38.318	ENSHCOG00000015246	-	61	38.318
ENSHCOG00000011612	zfat	83	31.081	ENSHCOG00000020972	-	96	31.081
ENSHCOG00000011612	zfat	58	44.643	ENSHCOG00000001318	-	96	46.835
ENSHCOG00000011612	zfat	61	47.458	ENSHCOG00000008168	-	97	46.032
ENSHCOG00000011612	zfat	50	33.333	ENSHCOG00000010332	-	75	33.333
ENSHCOG00000011612	zfat	62	38.519	ENSHCOG00000020976	-	57	38.519
ENSHCOG00000011612	zfat	56	31.507	ENSHCOG00000003085	-	67	38.596
ENSHCOG00000011612	zfat	57	30.769	ENSHCOG00000015476	-	90	32.243
ENSHCOG00000011612	zfat	56	41.667	ENSHCOG00000015005	-	58	41.667
ENSHCOG00000011612	zfat	60	32.231	ENSHCOG00000015000	-	96	30.698
ENSHCOG00000011612	zfat	62	32.812	ENSHCOG00000006286	ZNF319	84	32.812
ENSHCOG00000011612	zfat	79	41.237	ENSHCOG00000019481	-	69	31.797
ENSHCOG00000011612	zfat	84	45.902	ENSHCOG00000001942	-	95	43.860
ENSHCOG00000011612	zfat	53	34.746	ENSHCOG00000008601	-	79	34.746
ENSHCOG00000011612	zfat	51	36.735	ENSHCOG00000001292	-	62	36.735
ENSHCOG00000011612	zfat	62	31.674	ENSHCOG00000021033	-	74	31.674
ENSHCOG00000011612	zfat	53	33.766	ENSHCOG00000008906	-	87	33.766
ENSHCOG00000011612	zfat	61	35.714	ENSHCOG00000019001	-	97	35.714
ENSHCOG00000011612	zfat	54	43.077	ENSHCOG00000019006	-	50	43.077
ENSHCOG00000011612	zfat	54	37.143	ENSHCOG00000019458	-	53	37.143
ENSHCOG00000011612	zfat	52	31.472	ENSHCOG00000019454	-	54	31.472
ENSHCOG00000011612	zfat	57	33.032	ENSHCOG00000020940	-	64	33.032
ENSHCOG00000011612	zfat	62	40.385	ENSHCOG00000015105	-	98	32.955
ENSHCOG00000011612	zfat	56	38.462	ENSHCOG00000002898	-	53	38.462
ENSHCOG00000011612	zfat	64	38.750	ENSHCOG00000015484	-	75	38.750
ENSHCOG00000011612	zfat	56	36.207	ENSHCOG00000015237	-	68	36.207
ENSHCOG00000011612	zfat	63	43.396	ENSHCOG00000015231	-	71	43.396
ENSHCOG00000011612	zfat	60	31.776	ENSHCOG00000001448	-	57	31.776
ENSHCOG00000011612	zfat	54	32.768	ENSHCOG00000015463	-	98	32.584
ENSHCOG00000011612	zfat	61	39.252	ENSHCOG00000014792	-	60	39.252
ENSHCOG00000011612	zfat	52	41.538	ENSHCOG00000014796	-	58	41.538
ENSHCOG00000011612	zfat	60	42.373	ENSHCOG00000014797	-	57	42.373
ENSHCOG00000011612	zfat	70	43.636	ENSHCOG00000016455	e4f1	73	43.636
ENSHCOG00000011612	zfat	64	34.177	ENSHCOG00000018972	znf710b	56	34.177
ENSHCOG00000011612	zfat	61	30.675	ENSHCOG00000014986	-	88	30.675
ENSHCOG00000011612	zfat	60	36.842	ENSHCOG00000020856	-	87	36.842
ENSHCOG00000011612	zfat	57	33.636	ENSHCOG00000015355	-	87	43.860
ENSHCOG00000011612	zfat	55	31.818	ENSHCOG00000001793	-	72	31.818
ENSHCOG00000011612	zfat	56	31.878	ENSHCOG00000015386	-	79	31.878
ENSHCOG00000011612	zfat	64	30.403	ENSHCOG00000011411	-	84	30.531
ENSHCOG00000011612	zfat	63	31.132	ENSHCOG00000020984	-	86	31.132
ENSHCOG00000011612	zfat	55	46.552	ENSHCOG00000014777	-	69	46.552
ENSHCOG00000011612	zfat	57	30.851	ENSHCOG00000007358	-	78	30.851
ENSHCOG00000011612	zfat	81	32.258	ENSHCOG00000008028	-	81	32.258
ENSHCOG00000011612	zfat	55	30.682	ENSHCOG00000000511	-	65	30.682
ENSHCOG00000011612	zfat	65	36.220	ENSHCOG00000007681	-	85	36.220
ENSHCOG00000011612	zfat	64	35.897	ENSHCOG00000004879	znf341	52	35.897
ENSHCOG00000011612	zfat	57	31.792	ENSHCOG00000012662	-	81	31.977
ENSHCOG00000011612	zfat	55	31.373	ENSHCOG00000015414	-	63	31.373
ENSHCOG00000011612	zfat	62	43.478	ENSHCOG00000010282	znf236	65	43.478
ENSHCOG00000011612	zfat	59	36.145	ENSHCOG00000019438	-	87	36.145
ENSHCOG00000011612	zfat	60	30.317	ENSHCOG00000019385	-	70	30.374
ENSHCOG00000011612	zfat	51	32.520	ENSHCOG00000019389	-	53	32.520
ENSHCOG00000011612	zfat	64	31.183	ENSHCOG00000020848	-	71	31.183
ENSHCOG00000011612	zfat	71	35.088	ENSHCOG00000000947	-	73	35.088
ENSHCOG00000011612	zfat	54	36.782	ENSHCOG00000017456	-	86	36.782
ENSHCOG00000011612	zfat	67	33.645	ENSHCOG00000012617	-	88	33.645
ENSHCOG00000011612	zfat	55	35.714	ENSHCOG00000001629	-	63	35.714
ENSHCOG00000011612	zfat	52	34.454	ENSHCOG00000020924	-	58	41.818
ENSHCOG00000011612	zfat	54	47.368	ENSHCOG00000001873	-	55	47.368
ENSHCOG00000011612	zfat	67	31.183	ENSHCOG00000012175	-	98	31.183
ENSHCOG00000011612	zfat	55	37.736	ENSHCOG00000020909	-	79	32.143
ENSHCOG00000011612	zfat	64	31.122	ENSHCOG00000003041	-	93	31.122
ENSHCOG00000011612	zfat	55	44.643	ENSHCOG00000020993	-	74	44.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011612	zfat	86	43.917	ENSAMEG00000016750	ZFAT	82	43.917	Ailuropoda_melanoleuca
ENSHCOG00000011612	zfat	99	45.385	ENSANAG00000023121	ZFAT	88	46.061	Aotus_nancymaae
ENSHCOG00000011612	zfat	99	44.465	ENSBTAG00000017731	ZFAT	85	44.465	Bos_taurus
ENSHCOG00000011612	zfat	98	45.288	ENSCJAG00000004348	ZFAT	98	45.288	Callithrix_jacchus
ENSHCOG00000011612	zfat	98	45.946	ENSCCAG00000021827	ZFAT	88	45.857	Cebus_capucinus
ENSHCOG00000011612	zfat	98	45.673	ENSCATG00000031293	ZFAT	86	45.673	Cercocebus_atys
ENSHCOG00000011612	zfat	98	45.849	ENSCANG00000037239	ZFAT	98	45.761	Colobus_angolensis_palliatus
ENSHCOG00000011612	zfat	93	44.490	ENSETEG00000018406	ZFAT	85	44.490	Echinops_telfairi
ENSHCOG00000011612	zfat	98	45.857	ENSECAG00000024767	ZFAT	95	45.745	Equus_caballus
ENSHCOG00000011612	zfat	99	45.283	ENSFCAG00000008065	ZFAT	87	45.886	Felis_catus
ENSHCOG00000011612	zfat	96	46.634	ENSGALG00000037698	ZFAT	87	46.029	Gallus_gallus
ENSHCOG00000011612	zfat	95	59.696	ENSGAGG00000010975	ZFAT	86	59.696	Gopherus_agassizii
ENSHCOG00000011612	zfat	98	45.753	ENSGGOG00000007362	ZFAT	94	45.665	Gorilla_gorilla
ENSHCOG00000011612	zfat	96	45.000	ENSLACG00000010551	ZFAT	89	45.204	Latimeria_chalumnae
ENSHCOG00000011612	zfat	99	44.762	ENSLAFG00000010205	ZFAT	99	61.574	Loxodonta_africana
ENSHCOG00000011612	zfat	98	45.656	ENSMFAG00000041283	ZFAT	86	45.656	Macaca_fascicularis
ENSHCOG00000011612	zfat	98	45.656	ENSMMUG00000004918	ZFAT	86	45.656	Macaca_mulatta
ENSHCOG00000011612	zfat	98	45.560	ENSMNEG00000023253	ZFAT	86	45.560	Macaca_nemestrina
ENSHCOG00000011612	zfat	98	45.463	ENSMLEG00000040916	ZFAT	98	45.279	Mandrillus_leucophaeus
ENSHCOG00000011612	zfat	96	46.634	ENSMGAG00000012883	ZFAT	82	46.049	Meleagris_gallopavo
ENSHCOG00000011612	zfat	98	44.902	ENSMAUG00000005462	Zfat	84	43.863	Mesocricetus_auratus
ENSHCOG00000011612	zfat	99	45.158	ENSMLUG00000004146	ZFAT	84	45.594	Myotis_lucifugus
ENSHCOG00000011612	zfat	98	45.825	ENSNLEG00000010576	ZFAT	98	45.736	Nomascus_leucogenys
ENSHCOG00000011612	zfat	77	56.471	ENSOPRG00000004408	ZFAT	67	56.471	Ochotona_princeps
ENSHCOG00000011612	zfat	83	53.722	ENSOCUG00000017015	ZFAT	82	53.722	Oryctolagus_cuniculus
ENSHCOG00000011612	zfat	98	46.035	ENSPPAG00000030339	ZFAT	98	45.946	Pan_paniscus
ENSHCOG00000011612	zfat	99	44.854	ENSPPRG00000001340	ZFAT	87	45.446	Panthera_pardus
ENSHCOG00000011612	zfat	93	53.356	ENSPTIG00000003779	ZFAT	76	50.769	Panthera_tigris_altaica
ENSHCOG00000011612	zfat	98	45.728	ENSPTRG00000020607	ZFAT	98	46.336	Pan_troglodytes
ENSHCOG00000011612	zfat	98	45.560	ENSPANG00000017457	ZFAT	86	45.560	Papio_anubis
ENSHCOG00000011612	zfat	92	54.176	ENSPMGG00000022607	zfat	86	54.176	Periophthalmus_magnuspinnatus
ENSHCOG00000011612	zfat	98	45.821	ENSRBIG00000038226	ZFAT	98	45.733	Rhinopithecus_bieti
ENSHCOG00000011612	zfat	98	45.917	ENSRROG00000005017	ZFAT	98	45.733	Rhinopithecus_roxellana
ENSHCOG00000011612	zfat	98	45.146	ENSSBOG00000027340	ZFAT	95	43.571	Saimiri_boliviensis_boliviensis
ENSHCOG00000011612	zfat	85	45.034	ENSSHAG00000018373	ZFAT	82	45.034	Sarcophilus_harrisii
ENSHCOG00000011612	zfat	99	44.636	ENSSSCG00000030947	ZFAT	99	45.402	Sus_scrofa
ENSHCOG00000011612	zfat	90	58.029	ENSTGUG00000012603	ZFAT	68	58.029	Taeniopygia_guttata
ENSHCOG00000011612	zfat	99	44.307	ENSUAMG00000011329	ZFAT	92	44.476	Ursus_americanus
ENSHCOG00000011612	zfat	99	51.619	ENSUMAG00000001754	ZFAT	92	44.078	Ursus_maritimus
ENSHCOG00000011612	zfat	99	45.290	ENSVVUG00000019315	ZFAT	98	45.804	Vulpes_vulpes