EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000011619 (Gene tree)
Gene ID: 109518126
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10058 bases
Position: chrKV880020.1:963515-973572
Accession: 109518126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023234	PARP	PF00644.20	2.9e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000025709	-	3873	XM_019873795	ENSHCOP00000023234	1020 (aa)	XP_019729354	UPI00094F0F1C

Gene Model

Click here to download ENSHCOG00000011619's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03410	Base excision repair	KEGG
hcq04210	Apoptosis	KEGG
hcq04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000011619	parp1	51	33.091	ENSHCOG00000004741	parp3	92	33.996
ENSHCOG00000011619	parp1	51	32.844	ENSHCOG00000004731	parp3	92	34.137
ENSHCOG00000011619	parp1	52	41.123	ENSHCOG00000012275	parp2	91	42.063

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011619	parp1	100	69.659	ENSG00000143799	PARP1	100	69.268	Homo_sapiens
ENSHCOG00000011619	parp1	100	87.647	ENSAPOG00000006414	parp1	100	87.059	Acanthochromis_polyacanthus
ENSHCOG00000011619	parp1	99	68.655	ENSAMEG00000014451	PARP1	100	68.554	Ailuropoda_melanoleuca
ENSHCOG00000011619	parp1	100	86.471	ENSACIG00000005651	parp1	100	85.980	Amphilophus_citrinellus
ENSHCOG00000011619	parp1	100	88.627	ENSAOCG00000021005	parp1	100	87.843	Amphiprion_ocellaris
ENSHCOG00000011619	parp1	100	88.529	ENSAPEG00000004784	parp1	100	87.745	Amphiprion_percula
ENSHCOG00000011619	parp1	100	86.765	ENSATEG00000010457	parp1	100	86.275	Anabas_testudineus
ENSHCOG00000011619	parp1	87	71.734	ENSAPLG00000014039	PARP1	99	71.734	Anas_platyrhynchos
ENSHCOG00000011619	parp1	100	69.815	ENSACAG00000006189	PARP1	100	69.912	Anolis_carolinensis
ENSHCOG00000011619	parp1	100	69.366	ENSANAG00000032699	PARP1	100	69.463	Aotus_nancymaae
ENSHCOG00000011619	parp1	100	86.765	ENSACLG00000015489	parp1	100	86.275	Astatotilapia_calliptera
ENSHCOG00000011619	parp1	100	79.590	ENSAMXG00000006465	parp1	100	79.512	Astyanax_mexicanus
ENSHCOG00000011619	parp1	100	67.610	ENSBTAG00000000837	PARP1	100	67.805	Bos_taurus
ENSHCOG00000011619	parp1	86	43.750	WBGene00004049	parp-1	100	47.126	Caenorhabditis_elegans
ENSHCOG00000011619	parp1	100	68.805	ENSCJAG00000012831	PARP1	100	68.878	Callithrix_jacchus
ENSHCOG00000011619	parp1	99	68.126	ENSCAFG00000016089	PARP1	100	68.737	Canis_familiaris
ENSHCOG00000011619	parp1	100	68.744	ENSCAFG00020001660	PARP1	100	69.268	Canis_lupus_dingo
ENSHCOG00000011619	parp1	100	68.000	ENSCHIG00000018072	PARP1	100	68.293	Capra_hircus
ENSHCOG00000011619	parp1	99	69.913	ENSTSYG00000003699	PARP1	99	69.945	Carlito_syrichta
ENSHCOG00000011619	parp1	99	58.182	ENSCAPG00000011113	-	99	57.923	Cavia_aperea
ENSHCOG00000011619	parp1	100	69.268	ENSCPOG00000015643	-	100	68.878	Cavia_porcellus
ENSHCOG00000011619	parp1	100	69.756	ENSCCAG00000033484	PARP1	100	69.366	Cebus_capucinus
ENSHCOG00000011619	parp1	100	69.561	ENSCATG00000038981	PARP1	100	69.171	Cercocebus_atys
ENSHCOG00000011619	parp1	99	69.578	ENSCLAG00000006637	PARP1	99	69.185	Chinchilla_lanigera
ENSHCOG00000011619	parp1	66	76.562	ENSCHOG00000003539	PARP1	66	76.562	Choloepus_hoffmanni
ENSHCOG00000011619	parp1	99	71.246	ENSCPBG00000011958	PARP1	99	71.148	Chrysemys_picta_bellii
ENSHCOG00000011619	parp1	99	69.004	ENSCANG00000041340	PARP1	100	68.598	Colobus_angolensis_palliatus
ENSHCOG00000011619	parp1	100	68.248	ENSCGRG00001020559	Parp1	100	68.293	Cricetulus_griseus_chok1gshd
ENSHCOG00000011619	parp1	99	68.044	ENSCGRG00000004864	Parp1	100	68.089	Cricetulus_griseus_crigri
ENSHCOG00000011619	parp1	100	84.608	ENSCSEG00000020665	parp1	100	88.867	Cynoglossus_semilaevis
ENSHCOG00000011619	parp1	99	85.554	ENSCVAG00000021372	parp1	99	85.046	Cyprinodon_variegatus
ENSHCOG00000011619	parp1	100	80.645	ENSDARG00000019529	parp1	100	79.941	Danio_rerio
ENSHCOG00000011619	parp1	99	67.210	ENSDNOG00000012059	PARP1	100	67.515	Dasypus_novemcinctus
ENSHCOG00000011619	parp1	99	66.870	ENSDORG00000005234	Parp1	100	67.276	Dipodomys_ordii
ENSHCOG00000011619	parp1	99	41.234	FBgn0010247	Parp	99	40.909	Drosophila_melanogaster
ENSHCOG00000011619	parp1	88	76.562	ENSETEG00000013254	PARP1	88	76.562	Echinops_telfairi
ENSHCOG00000011619	parp1	99	58.800	ENSEBUG00000005820	parp1	100	58.517	Eptatretus_burgeri
ENSHCOG00000011619	parp1	98	68.520	ENSEASG00005013275	PARP1	99	68.918	Equus_asinus_asinus
ENSHCOG00000011619	parp1	100	68.683	ENSECAG00000019207	PARP1	100	68.976	Equus_caballus
ENSHCOG00000011619	parp1	99	66.438	ENSEEUG00000012253	PARP1	99	66.536	Erinaceus_europaeus
ENSHCOG00000011619	parp1	99	82.658	ENSELUG00000017336	parp1	99	82.347	Esox_lucius
ENSHCOG00000011619	parp1	99	68.081	ENSFCAG00000005777	PARP1	100	68.145	Felis_catus
ENSHCOG00000011619	parp1	99	71.385	ENSFALG00000011578	PARP1	100	72.053	Ficedula_albicollis
ENSHCOG00000011619	parp1	99	68.089	ENSFDAG00000017662	PARP1	100	67.683	Fukomys_damarensis
ENSHCOG00000011619	parp1	100	86.667	ENSFHEG00000001117	parp1	100	86.373	Fundulus_heteroclitus
ENSHCOG00000011619	parp1	99	81.765	ENSGMOG00000014929	parp1	100	81.373	Gadus_morhua
ENSHCOG00000011619	parp1	99	72.075	ENSGALG00000009228	PARP1	99	72.718	Gallus_gallus
ENSHCOG00000011619	parp1	100	86.078	ENSGAFG00000010450	parp1	100	85.392	Gambusia_affinis
ENSHCOG00000011619	parp1	100	86.399	ENSGACG00000011280	parp1	100	85.910	Gasterosteus_aculeatus
ENSHCOG00000011619	parp1	99	70.600	ENSGAGG00000010066	PARP1	99	70.658	Gopherus_agassizii
ENSHCOG00000011619	parp1	100	69.366	ENSGGOG00000006308	PARP1	100	68.976	Gorilla_gorilla
ENSHCOG00000011619	parp1	100	87.549	ENSHBUG00000010490	parp1	100	86.765	Haplochromis_burtoni
ENSHCOG00000011619	parp1	99	67.817	ENSHGLG00000003992	PARP1	93	67.817	Heterocephalus_glaber_female
ENSHCOG00000011619	parp1	99	67.817	ENSHGLG00100016965	PARP1	93	67.817	Heterocephalus_glaber_male
ENSHCOG00000011619	parp1	100	79.320	ENSIPUG00000020250	parp1	100	78.814	Ictalurus_punctatus
ENSHCOG00000011619	parp1	100	69.171	ENSSTOG00000016000	PARP1	100	68.780	Ictidomys_tridecemlineatus
ENSHCOG00000011619	parp1	100	67.541	ENSJJAG00000023497	Parp1	100	68.488	Jaculus_jaculus
ENSHCOG00000011619	parp1	100	85.882	ENSKMAG00000011627	parp1	100	85.294	Kryptolebias_marmoratus
ENSHCOG00000011619	parp1	100	87.843	ENSLBEG00000013376	parp1	100	87.059	Labrus_bergylta
ENSHCOG00000011619	parp1	99	56.615	ENSLACG00000002735	PARP1	99	56.280	Latimeria_chalumnae
ENSHCOG00000011619	parp1	100	78.963	ENSLOCG00000015798	parp1	100	78.809	Lepisosteus_oculatus
ENSHCOG00000011619	parp1	99	66.972	ENSLAFG00000007830	PARP1	100	67.175	Loxodonta_africana
ENSHCOG00000011619	parp1	100	69.463	ENSMFAG00000002526	PARP1	100	69.073	Macaca_fascicularis
ENSHCOG00000011619	parp1	100	69.561	ENSMMUG00000021820	PARP1	100	69.171	Macaca_mulatta
ENSHCOG00000011619	parp1	100	69.463	ENSMNEG00000034074	PARP1	100	69.073	Macaca_nemestrina
ENSHCOG00000011619	parp1	100	67.704	ENSMLEG00000012344	PARP1	100	67.315	Mandrillus_leucophaeus
ENSHCOG00000011619	parp1	100	87.941	ENSMAMG00000020652	parp1	100	87.059	Mastacembelus_armatus
ENSHCOG00000011619	parp1	100	87.843	ENSMZEG00005016907	parp1	100	87.059	Maylandia_zebra
ENSHCOG00000011619	parp1	99	72.431	ENSMGAG00000007760	PARP1	100	72.533	Meleagris_gallopavo
ENSHCOG00000011619	parp1	100	68.248	ENSMAUG00000008306	Parp1	100	68.293	Mesocricetus_auratus
ENSHCOG00000011619	parp1	100	66.537	ENSMICG00000017076	PARP1	100	66.049	Microcebus_murinus
ENSHCOG00000011619	parp1	100	68.000	ENSMOCG00000014315	Parp1	100	68.293	Microtus_ochrogaster
ENSHCOG00000011619	parp1	100	86.927	ENSMMOG00000015966	parp1	100	86.439	Mola_mola
ENSHCOG00000011619	parp1	100	68.878	ENSMODG00000006076	PARP1	100	68.976	Monodelphis_domestica
ENSHCOG00000011619	parp1	100	85.196	ENSMALG00000004057	parp1	100	84.510	Monopterus_albus
ENSHCOG00000011619	parp1	100	68.324	MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	Mus_caroli
ENSHCOG00000011619	parp1	100	68.226	ENSMUSG00000026496	Parp1	99	74.490	Mus_musculus
ENSHCOG00000011619	parp1	100	68.226	MGP_SPRETEiJ_G0015777	Parp1	100	74.490	Mus_spretus
ENSHCOG00000011619	parp1	100	68.878	ENSMPUG00000004585	PARP1	100	68.878	Mustela_putorius_furo
ENSHCOG00000011619	parp1	93	57.474	ENSMLUG00000012285	PARP1	83	74.885	Myotis_lucifugus
ENSHCOG00000011619	parp1	99	68.400	ENSNGAG00000003885	Parp1	99	68.499	Nannospalax_galili
ENSHCOG00000011619	parp1	100	86.569	ENSNBRG00000017434	parp1	100	86.078	Neolamprologus_brichardi
ENSHCOG00000011619	parp1	97	71.875	ENSNLEG00000013905	PARP1	100	71.875	Nomascus_leucogenys
ENSHCOG00000011619	parp1	67	77.612	ENSMEUG00000007720	PARP1	87	77.612	Notamacropus_eugenii
ENSHCOG00000011619	parp1	100	69.951	ENSOPRG00000011722	PARP1	100	70.244	Ochotona_princeps
ENSHCOG00000011619	parp1	100	68.585	ENSODEG00000007424	PARP1	100	68.098	Octodon_degus
ENSHCOG00000011619	parp1	100	87.353	ENSONIG00000013486	parp1	100	86.569	Oreochromis_niloticus
ENSHCOG00000011619	parp1	99	70.367	ENSOANG00000001488	PARP1	100	70.265	Ornithorhynchus_anatinus
ENSHCOG00000011619	parp1	100	69.298	ENSOCUG00000017820	PARP1	100	69.493	Oryctolagus_cuniculus
ENSHCOG00000011619	parp1	100	85.588	ENSORLG00000013691	parp1	100	84.902	Oryzias_latipes
ENSHCOG00000011619	parp1	99	85.410	ENSORLG00020001074	parp1	99	84.701	Oryzias_latipes_hni
ENSHCOG00000011619	parp1	100	85.784	ENSORLG00015007090	parp1	100	85.098	Oryzias_latipes_hsok
ENSHCOG00000011619	parp1	100	69.366	ENSOGAG00000016206	PARP1	100	69.171	Otolemur_garnettii
ENSHCOG00000011619	parp1	100	68.195	ENSOARG00000000811	PARP1	100	68.488	Ovis_aries
ENSHCOG00000011619	parp1	100	69.268	ENSPPAG00000040862	PARP1	100	68.878	Pan_paniscus
ENSHCOG00000011619	parp1	99	68.089	ENSPPRG00000003528	PARP1	100	68.053	Panthera_pardus
ENSHCOG00000011619	parp1	96	57.648	ENSPTIG00000009102	PARP1	98	57.604	Panthera_tigris_altaica
ENSHCOG00000011619	parp1	100	69.268	ENSPTRG00000002049	PARP1	100	68.878	Pan_troglodytes
ENSHCOG00000011619	parp1	100	69.591	ENSPANG00000011198	PARP1	100	69.201	Papio_anubis
ENSHCOG00000011619	parp1	100	79.138	ENSPKIG00000006039	parp1	100	79.138	Paramormyrops_kingsleyae
ENSHCOG00000011619	parp1	99	69.848	ENSPSIG00000016374	PARP1	100	69.848	Pelodiscus_sinensis
ENSHCOG00000011619	parp1	100	82.031	ENSPMGG00000008936	parp1	100	81.348	Periophthalmus_magnuspinnatus
ENSHCOG00000011619	parp1	100	68.488	ENSPEMG00000020230	Parp1	100	68.293	Peromyscus_maniculatus_bairdii
ENSHCOG00000011619	parp1	99	69.578	ENSPCIG00000006436	PARP1	99	69.578	Phascolarctos_cinereus
ENSHCOG00000011619	parp1	100	85.098	ENSPFOG00000002342	parp1	100	84.412	Poecilia_formosa
ENSHCOG00000011619	parp1	100	86.863	ENSPLAG00000000909	parp1	100	86.176	Poecilia_latipinna
ENSHCOG00000011619	parp1	100	86.765	ENSPMEG00000013979	parp1	100	86.078	Poecilia_mexicana
ENSHCOG00000011619	parp1	100	86.275	ENSPREG00000001114	parp1	100	85.588	Poecilia_reticulata
ENSHCOG00000011619	parp1	99	69.043	ENSPPYG00000000164	PARP1	100	68.635	Pongo_abelii
ENSHCOG00000011619	parp1	60	77.778	ENSPCAG00000005558	-	59	77.778	Procavia_capensis
ENSHCOG00000011619	parp1	100	68.585	ENSPCOG00000016918	PARP1	100	68.707	Propithecus_coquereli
ENSHCOG00000011619	parp1	92	75.472	ENSPVAG00000005543	PARP1	85	78.049	Pteropus_vampyrus
ENSHCOG00000011619	parp1	100	86.765	ENSPNYG00000009702	parp1	100	86.275	Pundamilia_nyererei
ENSHCOG00000011619	parp1	100	79.844	ENSPNAG00000002787	parp1	100	80.039	Pygocentrus_nattereri
ENSHCOG00000011619	parp1	100	67.892	ENSRNOG00000003084	Parp1	100	67.641	Rattus_norvegicus
ENSHCOG00000011619	parp1	100	69.463	ENSRBIG00000044893	PARP1	99	70.631	Rhinopithecus_bieti
ENSHCOG00000011619	parp1	100	69.463	ENSRROG00000029280	PARP1	99	70.631	Rhinopithecus_roxellana
ENSHCOG00000011619	parp1	99	51.622	ENSRROG00000040615	-	97	58.442	Rhinopithecus_roxellana
ENSHCOG00000011619	parp1	100	69.268	ENSSBOG00000010144	PARP1	100	69.561	Saimiri_boliviensis_boliviensis
ENSHCOG00000011619	parp1	99	69.654	ENSSHAG00000001991	PARP1	100	69.654	Sarcophilus_harrisii
ENSHCOG00000011619	parp1	100	79.961	ENSSFOG00015020017	parp1	100	79.024	Scleropages_formosus
ENSHCOG00000011619	parp1	100	87.843	ENSSMAG00000013799	parp1	100	87.353	Scophthalmus_maximus
ENSHCOG00000011619	parp1	100	88.039	ENSSDUG00000016626	parp1	100	87.353	Seriola_dumerili
ENSHCOG00000011619	parp1	100	88.039	ENSSLDG00000006384	parp1	100	87.353	Seriola_lalandi_dorsalis
ENSHCOG00000011619	parp1	53	76.157	ENSSARG00000009436	-	55	76.157	Sorex_araneus
ENSHCOG00000011619	parp1	100	66.699	ENSSPUG00000007790	PARP1	100	67.058	Sphenodon_punctatus
ENSHCOG00000011619	parp1	100	84.834	ENSSPAG00000019074	parp1	100	86.845	Stegastes_partitus
ENSHCOG00000011619	parp1	100	68.488	ENSSSCG00000023660	PARP1	100	68.390	Sus_scrofa
ENSHCOG00000011619	parp1	97	70.751	ENSTGUG00000004260	-	100	71.366	Taeniopygia_guttata
ENSHCOG00000011619	parp1	100	86.176	ENSTRUG00000014490	parp1	100	85.882	Takifugu_rubripes
ENSHCOG00000011619	parp1	100	85.019	ENSTNIG00000016384	parp1	100	84.825	Tetraodon_nigroviridis
ENSHCOG00000011619	parp1	84	75.000	ENSTBEG00000002364	PARP1	92	75.000	Tupaia_belangeri
ENSHCOG00000011619	parp1	100	64.293	ENSTTRG00000000188	PARP1	100	64.585	Tursiops_truncatus
ENSHCOG00000011619	parp1	99	68.973	ENSUAMG00000014388	PARP1	100	68.973	Ursus_americanus
ENSHCOG00000011619	parp1	96	61.866	ENSUMAG00000014555	PARP1	99	62.576	Ursus_maritimus
ENSHCOG00000011619	parp1	83	76.863	ENSVPAG00000011411	PARP1	83	76.863	Vicugna_pacos
ENSHCOG00000011619	parp1	99	68.228	ENSVVUG00000001655	PARP1	100	68.737	Vulpes_vulpes
ENSHCOG00000011619	parp1	99	69.085	ENSXETG00000022610	parp1	99	69.254	Xenopus_tropicalis
ENSHCOG00000011619	parp1	100	85.784	ENSXMAG00000003632	parp1	100	85.098	Xiphophorus_maculatus