EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000011745 (Gene tree)
Gene ID: 109522159
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10268 bases
Position: chrKV880150.1:1512993-1523260
Accession: 109522159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009340	R3H	PF01424.22	7.3e-10	1	1
ENSHCOP00000009343	R3H	PF01424.22	7.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000025773	-	1915	XM_019880470	ENSHCOP00000009343	404 (aa)	XP_019736029	-
ENSHCOT00000015440	-	1727	-	ENSHCOP00000009340	404 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000011745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011745	r3hcc1	95	32.227	ENSG00000104679	R3HCC1	100	50.000	Homo_sapiens
ENSHCOG00000011745	r3hcc1	91	50.739	ENSAPOG00000003616	r3hcc1	91	50.125	Acanthochromis_polyacanthus
ENSHCOG00000011745	r3hcc1	94	33.949	ENSAMEG00000002963	R3HCC1	65	43.636	Ailuropoda_melanoleuca
ENSHCOG00000011745	r3hcc1	93	46.756	ENSACIG00000017144	r3hcc1	99	56.173	Amphilophus_citrinellus
ENSHCOG00000011745	r3hcc1	91	54.703	ENSAOCG00000003945	r3hcc1	98	54.523	Amphiprion_ocellaris
ENSHCOG00000011745	r3hcc1	91	53.713	ENSAPEG00000003613	r3hcc1	98	53.266	Amphiprion_percula
ENSHCOG00000011745	r3hcc1	85	56.331	ENSATEG00000023860	r3hcc1	97	55.897	Anabas_testudineus
ENSHCOG00000011745	r3hcc1	94	35.227	ENSACAG00000016627	R3HCC1	69	42.424	Anolis_carolinensis
ENSHCOG00000011745	r3hcc1	93	32.854	ENSANAG00000036169	R3HCC1	96	32.367	Aotus_nancymaae
ENSHCOG00000011745	r3hcc1	94	33.333	ENSBTAG00000025830	R3HCC1	64	44.898	Bos_taurus
ENSHCOG00000011745	r3hcc1	95	32.576	ENSCJAG00000020118	R3HCC1	60	38.415	Callithrix_jacchus
ENSHCOG00000011745	r3hcc1	72	44.444	ENSCAFG00000009210	R3HCC1	64	45.578	Canis_familiaris
ENSHCOG00000011745	r3hcc1	56	41.497	ENSCAFG00020012870	R3HCC1	55	41.111	Canis_lupus_dingo
ENSHCOG00000011745	r3hcc1	67	47.059	ENSCHIG00000009107	R3HCC1	62	47.692	Capra_hircus
ENSHCOG00000011745	r3hcc1	94	32.723	ENSTSYG00000000511	R3HCC1	58	40.000	Carlito_syrichta
ENSHCOG00000011745	r3hcc1	57	35.507	ENSCAPG00000015813	R3HCC1	53	36.364	Cavia_aperea
ENSHCOG00000011745	r3hcc1	67	44.853	ENSCPOG00000009696	R3HCC1	59	46.154	Cavia_porcellus
ENSHCOG00000011745	r3hcc1	73	39.623	ENSCCAG00000037811	R3HCC1	96	31.643	Cebus_capucinus
ENSHCOG00000011745	r3hcc1	95	34.860	ENSCATG00000032971	R3HCC1	96	33.907	Cercocebus_atys
ENSHCOG00000011745	r3hcc1	94	33.257	ENSCLAG00000015556	R3HCC1	56	46.939	Chinchilla_lanigera
ENSHCOG00000011745	r3hcc1	74	40.854	ENSCSAG00000016250	R3HCC1	65	40.244	Chlorocebus_sabaeus
ENSHCOG00000011745	r3hcc1	72	44.025	ENSCHOG00000000396	R3HCC1	64	44.444	Choloepus_hoffmanni
ENSHCOG00000011745	r3hcc1	95	33.898	ENSCANG00000029441	R3HCC1	96	33.582	Colobus_angolensis_palliatus
ENSHCOG00000011745	r3hcc1	72	43.871	ENSCGRG00001014977	R3hcc1	63	43.871	Cricetulus_griseus_chok1gshd
ENSHCOG00000011745	r3hcc1	72	43.871	ENSCGRG00000004454	R3hcc1	63	43.871	Cricetulus_griseus_crigri
ENSHCOG00000011745	r3hcc1	91	53.171	ENSCSEG00000005748	r3hcc1	97	52.099	Cynoglossus_semilaevis
ENSHCOG00000011745	r3hcc1	77	44.693	ENSCVAG00000002640	r3hcc1	96	44.350	Cyprinodon_variegatus
ENSHCOG00000011745	r3hcc1	93	44.301	ENSDARG00000099593	r3hcc1	98	44.619	Danio_rerio
ENSHCOG00000011745	r3hcc1	94	32.648	ENSDNOG00000007168	R3HCC1	61	46.939	Dasypus_novemcinctus
ENSHCOG00000011745	r3hcc1	78	40.556	ENSDORG00000026365	R3hcc1	69	40.909	Dipodomys_ordii
ENSHCOG00000011745	r3hcc1	71	38.217	ENSETEG00000001147	R3HCC1	94	30.839	Echinops_telfairi
ENSHCOG00000011745	r3hcc1	94	33.708	ENSEASG00005018782	R3HCC1	78	34.018	Equus_asinus_asinus
ENSHCOG00000011745	r3hcc1	94	34.305	ENSECAG00000025013	R3HCC1	66	45.395	Equus_caballus
ENSHCOG00000011745	r3hcc1	71	46.259	ENSEEUG00000011918	R3HCC1	64	46.259	Erinaceus_europaeus
ENSHCOG00000011745	r3hcc1	86	46.098	ENSELUG00000023650	r3hcc1	98	44.499	Esox_lucius
ENSHCOG00000011745	r3hcc1	94	34.901	ENSFCAG00000012395	R3HCC1	83	36.000	Felis_catus
ENSHCOG00000011745	r3hcc1	72	37.857	ENSFALG00000001646	R3HCC1	50	38.095	Ficedula_albicollis
ENSHCOG00000011745	r3hcc1	68	45.390	ENSFDAG00000001572	R3HCC1	60	46.970	Fukomys_damarensis
ENSHCOG00000011745	r3hcc1	91	42.933	ENSGMOG00000017590	-	99	42.175	Gadus_morhua
ENSHCOG00000011745	r3hcc1	95	54.610	ENSGAFG00000008747	-	92	54.306	Gambusia_affinis
ENSHCOG00000011745	r3hcc1	93	54.412	ENSGACG00000008447	r3hcc1	96	54.412	Gasterosteus_aculeatus
ENSHCOG00000011745	r3hcc1	95	35.204	ENSGGOG00000013817	R3HCC1	96	33.417	Gorilla_gorilla
ENSHCOG00000011745	r3hcc1	58	78.161	ENSHBUG00000022250	-	76	78.161	Haplochromis_burtoni
ENSHCOG00000011745	r3hcc1	94	33.179	ENSHGLG00000010517	R3HCC1	89	31.663	Heterocephalus_glaber_female
ENSHCOG00000011745	r3hcc1	94	33.179	ENSHGLG00100006388	R3HCC1	89	31.663	Heterocephalus_glaber_male
ENSHCOG00000011745	r3hcc1	93	49.502	ENSIPUG00000024504	r3hcc1	87	49.000	Ictalurus_punctatus
ENSHCOG00000011745	r3hcc1	73	44.025	ENSSTOG00000027130	R3HCC1	64	44.444	Ictidomys_tridecemlineatus
ENSHCOG00000011745	r3hcc1	70	44.218	ENSJJAG00000013075	R3hcc1	63	44.218	Jaculus_jaculus
ENSHCOG00000011745	r3hcc1	87	53.213	ENSKMAG00000000286	r3hcc1	98	51.832	Kryptolebias_marmoratus
ENSHCOG00000011745	r3hcc1	93	36.659	ENSLACG00000011894	R3HCC1	69	48.125	Latimeria_chalumnae
ENSHCOG00000011745	r3hcc1	96	44.045	ENSLOCG00000015442	r3hcc1	98	47.436	Lepisosteus_oculatus
ENSHCOG00000011745	r3hcc1	67	47.794	ENSLAFG00000016137	R3HCC1	55	48.837	Loxodonta_africana
ENSHCOG00000011745	r3hcc1	95	33.415	ENSMFAG00000032894	R3HCC1	96	31.884	Macaca_fascicularis
ENSHCOG00000011745	r3hcc1	75	41.420	ENSMMUG00000016655	R3HCC1	96	32.458	Macaca_mulatta
ENSHCOG00000011745	r3hcc1	95	34.146	ENSMNEG00000043283	R3HCC1	96	32.609	Macaca_nemestrina
ENSHCOG00000011745	r3hcc1	95	33.659	ENSMLEG00000030147	R3HCC1	96	32.836	Mandrillus_leucophaeus
ENSHCOG00000011745	r3hcc1	87	55.416	ENSMAMG00000018146	r3hcc1	98	54.337	Mastacembelus_armatus
ENSHCOG00000011745	r3hcc1	92	34.300	ENSMGAG00000001356	R3HCC1	65	41.139	Meleagris_gallopavo
ENSHCOG00000011745	r3hcc1	65	48.462	ENSMAUG00000016096	R3hcc1	69	40.782	Mesocricetus_auratus
ENSHCOG00000011745	r3hcc1	93	34.889	ENSMICG00000011146	R3HCC1	96	34.913	Microcebus_murinus
ENSHCOG00000011745	r3hcc1	71	45.395	ENSMOCG00000018508	R3hcc1	64	43.293	Microtus_ochrogaster
ENSHCOG00000011745	r3hcc1	87	52.273	ENSMALG00000000731	r3hcc1	98	52.850	Monopterus_albus
ENSHCOG00000011745	r3hcc1	70	44.898	MGP_CAROLIEiJ_G0019467	R3hcc1	61	43.226	Mus_caroli
ENSHCOG00000011745	r3hcc1	70	44.898	ENSMUSG00000034194	R3hcc1	69	38.462	Mus_musculus
ENSHCOG00000011745	r3hcc1	72	44.586	MGP_PahariEiJ_G0030484	R3hcc1	61	44.586	Mus_pahari
ENSHCOG00000011745	r3hcc1	70	44.898	MGP_SPRETEiJ_G0020359	R3hcc1	69	38.462	Mus_spretus
ENSHCOG00000011745	r3hcc1	94	33.718	ENSMPUG00000003457	R3HCC1	62	42.424	Mustela_putorius_furo
ENSHCOG00000011745	r3hcc1	94	33.933	ENSMLUG00000000266	R3HCC1	75	40.268	Myotis_lucifugus
ENSHCOG00000011745	r3hcc1	69	45.890	ENSNGAG00000016747	R3hcc1	65	44.231	Nannospalax_galili
ENSHCOG00000011745	r3hcc1	76	81.481	ENSNBRG00000016975	-	82	81.481	Neolamprologus_brichardi
ENSHCOG00000011745	r3hcc1	64	37.903	ENSNLEG00000015944	R3HCC1	58	37.908	Nomascus_leucogenys
ENSHCOG00000011745	r3hcc1	94	35.035	ENSMEUG00000010587	R3HCC1	96	35.561	Notamacropus_eugenii
ENSHCOG00000011745	r3hcc1	94	35.566	ENSOPRG00000013390	R3HCC1	92	34.442	Ochotona_princeps
ENSHCOG00000011745	r3hcc1	85	44.444	ENSODEG00000007529	R3HCC1	73	40.278	Octodon_degus
ENSHCOG00000011745	r3hcc1	92	32.426	ENSOANG00000013877	R3HCC1	94	32.731	Ornithorhynchus_anatinus
ENSHCOG00000011745	r3hcc1	95	33.489	ENSOCUG00000023554	R3HCC1	83	33.898	Oryctolagus_cuniculus
ENSHCOG00000011745	r3hcc1	88	51.200	ENSORLG00000016816	r3hcc1	98	51.087	Oryzias_latipes
ENSHCOG00000011745	r3hcc1	88	51.733	ENSORLG00020012005	r3hcc1	98	51.630	Oryzias_latipes_hni
ENSHCOG00000011745	r3hcc1	88	51.467	ENSORLG00015007018	r3hcc1	98	51.359	Oryzias_latipes_hsok
ENSHCOG00000011745	r3hcc1	88	50.660	ENSOMEG00000000816	r3hcc1	98	51.882	Oryzias_melastigma
ENSHCOG00000011745	r3hcc1	94	34.763	ENSOGAG00000001291	R3HCC1	89	35.011	Otolemur_garnettii
ENSHCOG00000011745	r3hcc1	94	33.482	ENSOARG00000010146	R3HCC1	94	34.545	Ovis_aries
ENSHCOG00000011745	r3hcc1	95	33.810	ENSPPAG00000033165	R3HCC1	65	52.381	Pan_paniscus
ENSHCOG00000011745	r3hcc1	93	35.000	ENSPPRG00000002522	R3HCC1	68	44.444	Panthera_pardus
ENSHCOG00000011745	r3hcc1	84	33.978	ENSPTIG00000011230	R3HCC1	92	33.163	Panthera_tigris_altaica
ENSHCOG00000011745	r3hcc1	95	32.850	ENSPTRG00000020076	R3HCC1	65	52.381	Pan_troglodytes
ENSHCOG00000011745	r3hcc1	95	33.659	ENSPANG00000000453	R3HCC1	96	33.333	Papio_anubis
ENSHCOG00000011745	r3hcc1	85	47.105	ENSPKIG00000020397	-	94	46.900	Paramormyrops_kingsleyae
ENSHCOG00000011745	r3hcc1	85	50.423	ENSPKIG00000014426	-	94	50.432	Paramormyrops_kingsleyae
ENSHCOG00000011745	r3hcc1	93	35.116	ENSPSIG00000017664	R3HCC1	96	34.515	Pelodiscus_sinensis
ENSHCOG00000011745	r3hcc1	57	62.651	ENSPMGG00000007792	r3hcc1	64	51.049	Periophthalmus_magnuspinnatus
ENSHCOG00000011745	r3hcc1	66	46.970	ENSPEMG00000007118	R3hcc1	58	46.970	Peromyscus_maniculatus_bairdii
ENSHCOG00000011745	r3hcc1	95	53.555	ENSPFOG00000022301	r3hcc1	92	52.871	Poecilia_formosa
ENSHCOG00000011745	r3hcc1	95	54.374	ENSPLAG00000010794	r3hcc1	92	53.237	Poecilia_latipinna
ENSHCOG00000011745	r3hcc1	95	53.555	ENSPMEG00000022515	r3hcc1	92	52.871	Poecilia_mexicana
ENSHCOG00000011745	r3hcc1	95	54.137	ENSPREG00000000713	r3hcc1	92	52.871	Poecilia_reticulata
ENSHCOG00000011745	r3hcc1	65	40.854	ENSPPYG00000018436	R3HCC1	67	40.244	Pongo_abelii
ENSHCOG00000011745	r3hcc1	67	47.794	ENSPCAG00000012229	R3HCC1	61	48.462	Procavia_capensis
ENSHCOG00000011745	r3hcc1	93	34.236	ENSPCOG00000027554	R3HCC1	70	41.818	Propithecus_coquereli
ENSHCOG00000011745	r3hcc1	94	33.103	ENSPVAG00000009829	R3HCC1	93	33.412	Pteropus_vampyrus
ENSHCOG00000011745	r3hcc1	89	49.180	ENSPNAG00000023875	r3hcc1	99	48.421	Pygocentrus_nattereri
ENSHCOG00000011745	r3hcc1	73	43.949	ENSRNOG00000016777	AABR07018321.1	56	40.957	Rattus_norvegicus
ENSHCOG00000011745	r3hcc1	95	33.659	ENSRBIG00000028045	R3HCC1	96	33.085	Rhinopithecus_bieti
ENSHCOG00000011745	r3hcc1	95	33.659	ENSRROG00000031126	R3HCC1	96	33.085	Rhinopithecus_roxellana
ENSHCOG00000011745	r3hcc1	95	32.464	ENSSBOG00000022590	R3HCC1	62	52.381	Saimiri_boliviensis_boliviensis
ENSHCOG00000011745	r3hcc1	94	42.857	ENSSFOG00015013507	r3hcc1	96	46.736	Scleropages_formosus
ENSHCOG00000011745	r3hcc1	87	55.583	ENSSMAG00000008647	r3hcc1	98	54.156	Scophthalmus_maximus
ENSHCOG00000011745	r3hcc1	94	57.377	ENSSDUG00000022786	r3hcc1	98	57.583	Seriola_dumerili
ENSHCOG00000011745	r3hcc1	94	57.611	ENSSLDG00000019031	r3hcc1	98	56.643	Seriola_lalandi_dorsalis
ENSHCOG00000011745	r3hcc1	53	36.879	ENSSARG00000013514	-	50	38.298	Sorex_araneus
ENSHCOG00000011745	r3hcc1	91	54.015	ENSSPAG00000013497	r3hcc1	98	53.980	Stegastes_partitus
ENSHCOG00000011745	r3hcc1	93	31.002	ENSSSCG00000037347	-	87	30.260	Sus_scrofa
ENSHCOG00000011745	r3hcc1	94	34.253	ENSSSCG00000039915	-	90	33.255	Sus_scrofa
ENSHCOG00000011745	r3hcc1	91	49.869	ENSTRUG00000015880	r3hcc1	96	49.600	Takifugu_rubripes
ENSHCOG00000011745	r3hcc1	94	30.700	ENSTTRG00000012247	R3HCC1	93	31.002	Tursiops_truncatus
ENSHCOG00000011745	r3hcc1	71	45.098	ENSUAMG00000007344	R3HCC1	70	43.030	Ursus_americanus
ENSHCOG00000011745	r3hcc1	72	44.444	ENSVVUG00000005056	R3HCC1	64	45.578	Vulpes_vulpes
ENSHCOG00000011745	r3hcc1	84	50.000	ENSXCOG00000017626	r3hcc1	84	49.206	Xiphophorus_couchianus
ENSHCOG00000011745	r3hcc1	95	54.098	ENSXMAG00000018375	r3hcc1	92	53.938	Xiphophorus_maculatus