EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000011751 (Gene tree)
Gene ID: 109527635
Gene Symbol: polr3f
Alias: zgc:56299|zgc:76983
Full Name: RNA polymerase III subunit F
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1996 bases
Position: chrKV880311.1:43940-45935
Accession: 109527635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009322	RNA_pol_Rpc34	PF05158.12	5.6e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000025761	-	951	XM_019889649	ENSHCOP00000009322	316 (aa)	XP_019745208	UPI00094E1C3A

Gene Model

Click here to download ENSHCOG00000011751's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03020	RNA polymerase	KEGG
hcq04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011751	polr3f	100	76.899	ENSG00000132664	POLR3F	100	76.899	Homo_sapiens
ENSHCOG00000011751	polr3f	100	82.911	ENSAPOG00000008271	polr3f	100	82.911	Acanthochromis_polyacanthus
ENSHCOG00000011751	polr3f	100	76.899	ENSAMEG00000005222	POLR3F	100	76.899	Ailuropoda_melanoleuca
ENSHCOG00000011751	polr3f	100	76.266	ENSACIG00000006705	polr3f	100	76.266	Amphilophus_citrinellus
ENSHCOG00000011751	polr3f	100	82.911	ENSAOCG00000000687	polr3f	100	82.911	Amphiprion_ocellaris
ENSHCOG00000011751	polr3f	100	82.595	ENSAPEG00000015263	polr3f	100	82.595	Amphiprion_percula
ENSHCOG00000011751	polr3f	87	82.909	ENSATEG00000015539	polr3f	100	82.909	Anabas_testudineus
ENSHCOG00000011751	polr3f	87	78.182	ENSAPLG00000005533	POLR3F	100	78.182	Anas_platyrhynchos
ENSHCOG00000011751	polr3f	96	77.228	ENSACAG00000014293	POLR3F	98	77.228	Anolis_carolinensis
ENSHCOG00000011751	polr3f	100	76.899	ENSANAG00000026726	POLR3F	100	76.899	Aotus_nancymaae
ENSHCOG00000011751	polr3f	100	83.544	ENSACLG00000003615	polr3f	100	83.544	Astatotilapia_calliptera
ENSHCOG00000011751	polr3f	100	80.063	ENSAMXG00000036020	polr3f	100	80.063	Astyanax_mexicanus
ENSHCOG00000011751	polr3f	100	76.899	ENSBTAG00000008825	POLR3F	100	76.899	Bos_taurus
ENSHCOG00000011751	polr3f	95	34.106	WBGene00021112	W09C3.4	95	33.775	Caenorhabditis_elegans
ENSHCOG00000011751	polr3f	100	76.899	ENSCJAG00000005159	POLR3F	100	76.899	Callithrix_jacchus
ENSHCOG00000011751	polr3f	100	77.215	ENSCAFG00000005420	POLR3F	100	77.215	Canis_familiaris
ENSHCOG00000011751	polr3f	100	77.215	ENSCAFG00020027500	POLR3F	100	77.215	Canis_lupus_dingo
ENSHCOG00000011751	polr3f	100	76.899	ENSCHIG00000014743	POLR3F	100	76.899	Capra_hircus
ENSHCOG00000011751	polr3f	100	76.899	ENSTSYG00000004207	POLR3F	100	76.899	Carlito_syrichta
ENSHCOG00000011751	polr3f	82	59.477	ENSCAPG00000008423	POLR3F	100	59.477	Cavia_aperea
ENSHCOG00000011751	polr3f	100	76.582	ENSCPOG00000002400	POLR3F	100	76.582	Cavia_porcellus
ENSHCOG00000011751	polr3f	100	69.304	ENSCCAG00000021800	POLR3F	100	69.304	Cebus_capucinus
ENSHCOG00000011751	polr3f	100	76.899	ENSCATG00000019507	POLR3F	100	76.899	Cercocebus_atys
ENSHCOG00000011751	polr3f	100	76.899	ENSCLAG00000016296	POLR3F	100	76.899	Chinchilla_lanigera
ENSHCOG00000011751	polr3f	100	76.899	ENSCSAG00000011513	POLR3F	100	76.899	Chlorocebus_sabaeus
ENSHCOG00000011751	polr3f	73	78.322	ENSCHOG00000013268	POLR3F	73	78.322	Choloepus_hoffmanni
ENSHCOG00000011751	polr3f	87	77.455	ENSCPBG00000023473	POLR3F	100	77.455	Chrysemys_picta_bellii
ENSHCOG00000011751	polr3f	99	55.380	ENSCING00000001212	-	99	55.380	Ciona_intestinalis
ENSHCOG00000011751	polr3f	71	56.000	ENSCSAVG00000003340	-	99	56.000	Ciona_savignyi
ENSHCOG00000011751	polr3f	92	76.976	ENSCANG00000037390	POLR3F	100	76.976	Colobus_angolensis_palliatus
ENSHCOG00000011751	polr3f	100	76.582	ENSCGRG00001002032	Polr3f	100	76.582	Cricetulus_griseus_chok1gshd
ENSHCOG00000011751	polr3f	100	76.582	ENSCGRG00000010852	Polr3f	100	76.582	Cricetulus_griseus_crigri
ENSHCOG00000011751	polr3f	100	80.696	ENSCSEG00000001247	polr3f	100	80.696	Cynoglossus_semilaevis
ENSHCOG00000011751	polr3f	100	82.911	ENSCVAG00000007611	polr3f	100	82.911	Cyprinodon_variegatus
ENSHCOG00000011751	polr3f	100	81.013	ENSDARG00000012572	polr3f	100	81.013	Danio_rerio
ENSHCOG00000011751	polr3f	100	74.367	ENSDNOG00000010719	POLR3F	100	74.367	Dasypus_novemcinctus
ENSHCOG00000011751	polr3f	100	76.899	ENSDORG00000016352	Polr3f	100	76.899	Dipodomys_ordii
ENSHCOG00000011751	polr3f	95	48.837	FBgn0038951	CG5380	99	48.837	Drosophila_melanogaster
ENSHCOG00000011751	polr3f	88	46.403	ENSETEG00000015485	-	99	46.403	Echinops_telfairi
ENSHCOG00000011751	polr3f	100	72.468	ENSEBUG00000006783	polr3f	100	72.468	Eptatretus_burgeri
ENSHCOG00000011751	polr3f	100	76.899	ENSEASG00005002022	POLR3F	100	76.899	Equus_asinus_asinus
ENSHCOG00000011751	polr3f	100	76.899	ENSECAG00000009920	POLR3F	100	76.899	Equus_caballus
ENSHCOG00000011751	polr3f	100	50.316	ENSEEUG00000000184	POLR3F	80	80.000	Erinaceus_europaeus
ENSHCOG00000011751	polr3f	100	80.696	ENSELUG00000001558	polr3f	100	80.696	Esox_lucius
ENSHCOG00000011751	polr3f	100	76.899	ENSFCAG00000013828	POLR3F	100	76.899	Felis_catus
ENSHCOG00000011751	polr3f	87	78.909	ENSFALG00000007623	POLR3F	100	78.909	Ficedula_albicollis
ENSHCOG00000011751	polr3f	100	76.266	ENSFDAG00000002528	POLR3F	100	76.266	Fukomys_damarensis
ENSHCOG00000011751	polr3f	100	82.595	ENSFHEG00000006450	polr3f	100	82.595	Fundulus_heteroclitus
ENSHCOG00000011751	polr3f	100	77.215	ENSGALG00000008749	POLR3F	100	77.215	Gallus_gallus
ENSHCOG00000011751	polr3f	100	83.228	ENSGAFG00000003698	polr3f	100	83.228	Gambusia_affinis
ENSHCOG00000011751	polr3f	100	76.899	ENSGAGG00000006151	POLR3F	100	76.899	Gopherus_agassizii
ENSHCOG00000011751	polr3f	100	76.899	ENSGGOG00000011543	POLR3F	100	76.899	Gorilla_gorilla
ENSHCOG00000011751	polr3f	100	83.544	ENSHBUG00000013806	polr3f	100	83.544	Haplochromis_burtoni
ENSHCOG00000011751	polr3f	100	77.215	ENSHGLG00000011867	POLR3F	100	77.215	Heterocephalus_glaber_female
ENSHCOG00000011751	polr3f	100	77.215	ENSHGLG00100012577	POLR3F	100	77.215	Heterocephalus_glaber_male
ENSHCOG00000011751	polr3f	100	80.063	ENSIPUG00000013347	polr3f	100	80.063	Ictalurus_punctatus
ENSHCOG00000011751	polr3f	100	76.899	ENSSTOG00000013588	POLR3F	100	76.899	Ictidomys_tridecemlineatus
ENSHCOG00000011751	polr3f	100	77.215	ENSJJAG00000017513	Polr3f	100	77.215	Jaculus_jaculus
ENSHCOG00000011751	polr3f	87	76.000	ENSKMAG00000016495	polr3f	100	76.000	Kryptolebias_marmoratus
ENSHCOG00000011751	polr3f	73	82.759	ENSLBEG00000011998	polr3f	100	82.759	Labrus_bergylta
ENSHCOG00000011751	polr3f	100	76.899	ENSLACG00000009371	POLR3F	100	76.899	Latimeria_chalumnae
ENSHCOG00000011751	polr3f	100	78.797	ENSLOCG00000015701	polr3f	100	78.797	Lepisosteus_oculatus
ENSHCOG00000011751	polr3f	100	76.899	ENSLAFG00000004929	POLR3F	100	76.899	Loxodonta_africana
ENSHCOG00000011751	polr3f	100	76.899	ENSMFAG00000002227	POLR3F	100	76.899	Macaca_fascicularis
ENSHCOG00000011751	polr3f	87	78.182	ENSMMUG00000004143	POLR3F	100	78.182	Macaca_mulatta
ENSHCOG00000011751	polr3f	100	76.899	ENSMNEG00000033404	POLR3F	100	76.899	Macaca_nemestrina
ENSHCOG00000011751	polr3f	100	76.899	ENSMLEG00000021905	POLR3F	100	76.899	Mandrillus_leucophaeus
ENSHCOG00000011751	polr3f	100	82.595	ENSMAMG00000017975	polr3f	100	82.595	Mastacembelus_armatus
ENSHCOG00000011751	polr3f	100	83.228	ENSMZEG00005015134	polr3f	100	83.228	Maylandia_zebra
ENSHCOG00000011751	polr3f	100	77.532	ENSMGAG00000006691	POLR3F	100	77.532	Meleagris_gallopavo
ENSHCOG00000011751	polr3f	100	76.582	ENSMAUG00000020176	Polr3f	100	76.582	Mesocricetus_auratus
ENSHCOG00000011751	polr3f	100	77.215	ENSMICG00000044519	POLR3F	100	77.215	Microcebus_murinus
ENSHCOG00000011751	polr3f	100	76.582	ENSMOCG00000018352	Polr3f	100	76.582	Microtus_ochrogaster
ENSHCOG00000011751	polr3f	93	82.828	ENSMMOG00000018477	polr3f	100	82.828	Mola_mola
ENSHCOG00000011751	polr3f	100	76.266	ENSMODG00000005624	POLR3F	100	76.266	Monodelphis_domestica
ENSHCOG00000011751	polr3f	100	82.595	ENSMALG00000006685	polr3f	100	82.595	Monopterus_albus
ENSHCOG00000011751	polr3f	100	76.582	MGP_CAROLIEiJ_G0024385	Polr3f	100	76.582	Mus_caroli
ENSHCOG00000011751	polr3f	100	76.582	ENSMUSG00000027427	Polr3f	100	76.582	Mus_musculus
ENSHCOG00000011751	polr3f	100	76.582	MGP_PahariEiJ_G0025829	Polr3f	100	76.582	Mus_pahari
ENSHCOG00000011751	polr3f	100	76.582	MGP_SPRETEiJ_G0025304	Polr3f	100	76.582	Mus_spretus
ENSHCOG00000011751	polr3f	100	58.462	ENSMPUG00000001252	-	100	58.462	Mustela_putorius_furo
ENSHCOG00000011751	polr3f	100	76.899	ENSMLUG00000014844	POLR3F	100	76.899	Myotis_lucifugus
ENSHCOG00000011751	polr3f	100	76.266	ENSNGAG00000010898	Polr3f	100	76.266	Nannospalax_galili
ENSHCOG00000011751	polr3f	100	83.861	ENSNBRG00000020796	polr3f	100	83.861	Neolamprologus_brichardi
ENSHCOG00000011751	polr3f	100	76.899	ENSNLEG00000009778	POLR3F	100	76.899	Nomascus_leucogenys
ENSHCOG00000011751	polr3f	93	71.525	ENSMEUG00000010320	POLR3F	100	71.525	Notamacropus_eugenii
ENSHCOG00000011751	polr3f	100	76.582	ENSOPRG00000003385	POLR3F	100	76.582	Ochotona_princeps
ENSHCOG00000011751	polr3f	100	77.215	ENSODEG00000011521	POLR3F	100	77.215	Octodon_degus
ENSHCOG00000011751	polr3f	100	83.228	ENSONIG00000006858	polr3f	100	83.228	Oreochromis_niloticus
ENSHCOG00000011751	polr3f	100	75.949	ENSOANG00000001253	POLR3F	100	75.949	Ornithorhynchus_anatinus
ENSHCOG00000011751	polr3f	100	77.215	ENSOCUG00000015067	POLR3F	100	77.215	Oryctolagus_cuniculus
ENSHCOG00000011751	polr3f	100	83.544	ENSORLG00000022412	polr3f	100	83.544	Oryzias_latipes
ENSHCOG00000011751	polr3f	100	83.544	ENSORLG00020021944	polr3f	100	83.544	Oryzias_latipes_hni
ENSHCOG00000011751	polr3f	100	76.899	ENSOGAG00000002916	POLR3F	100	76.899	Otolemur_garnettii
ENSHCOG00000011751	polr3f	100	44.620	ENSOARG00000008647	-	100	44.304	Ovis_aries
ENSHCOG00000011751	polr3f	100	76.899	ENSOARG00000000315	-	100	76.899	Ovis_aries
ENSHCOG00000011751	polr3f	100	76.899	ENSPPAG00000036681	POLR3F	100	76.899	Pan_paniscus
ENSHCOG00000011751	polr3f	100	76.899	ENSPPRG00000024604	POLR3F	100	76.899	Panthera_pardus
ENSHCOG00000011751	polr3f	100	76.899	ENSPTIG00000020292	POLR3F	100	76.899	Panthera_tigris_altaica
ENSHCOG00000011751	polr3f	100	76.899	ENSPTRG00000013287	POLR3F	100	76.899	Pan_troglodytes
ENSHCOG00000011751	polr3f	100	76.899	ENSPANG00000025015	POLR3F	100	76.899	Papio_anubis
ENSHCOG00000011751	polr3f	100	80.063	ENSPKIG00000004427	polr3f	100	80.063	Paramormyrops_kingsleyae
ENSHCOG00000011751	polr3f	87	78.182	ENSPSIG00000016613	POLR3F	100	78.182	Pelodiscus_sinensis
ENSHCOG00000011751	polr3f	100	54.747	ENSPMGG00000018350	polr3f	100	55.063	Periophthalmus_magnuspinnatus
ENSHCOG00000011751	polr3f	100	76.899	ENSPEMG00000006966	Polr3f	100	76.899	Peromyscus_maniculatus_bairdii
ENSHCOG00000011751	polr3f	100	72.152	ENSPMAG00000005530	polr3f	100	72.152	Petromyzon_marinus
ENSHCOG00000011751	polr3f	100	76.266	ENSPCIG00000000908	POLR3F	85	76.266	Phascolarctos_cinereus
ENSHCOG00000011751	polr3f	100	82.595	ENSPFOG00000018334	polr3f	100	82.595	Poecilia_formosa
ENSHCOG00000011751	polr3f	100	82.595	ENSPLAG00000021803	polr3f	100	82.595	Poecilia_latipinna
ENSHCOG00000011751	polr3f	100	82.595	ENSPMEG00000013150	polr3f	100	82.595	Poecilia_mexicana
ENSHCOG00000011751	polr3f	100	82.595	ENSPREG00000005278	polr3f	100	82.595	Poecilia_reticulata
ENSHCOG00000011751	polr3f	100	76.899	ENSPPYG00000010737	POLR3F	100	76.899	Pongo_abelii
ENSHCOG00000011751	polr3f	66	75.676	ENSPCAG00000004893	POLR3F	70	75.676	Procavia_capensis
ENSHCOG00000011751	polr3f	100	77.215	ENSPCOG00000004543	POLR3F	100	77.215	Propithecus_coquereli
ENSHCOG00000011751	polr3f	100	76.582	ENSPVAG00000000403	POLR3F	100	76.582	Pteropus_vampyrus
ENSHCOG00000011751	polr3f	100	83.544	ENSPNYG00000016276	polr3f	100	83.544	Pundamilia_nyererei
ENSHCOG00000011751	polr3f	100	81.646	ENSPNAG00000005164	polr3f	100	81.646	Pygocentrus_nattereri
ENSHCOG00000011751	polr3f	100	76.899	ENSRNOG00000007548	Polr3f	85	76.899	Rattus_norvegicus
ENSHCOG00000011751	polr3f	100	76.899	ENSRBIG00000021268	POLR3F	100	76.899	Rhinopithecus_bieti
ENSHCOG00000011751	polr3f	100	76.899	ENSRROG00000039911	POLR3F	100	76.899	Rhinopithecus_roxellana
ENSHCOG00000011751	polr3f	100	76.899	ENSSBOG00000018207	POLR3F	100	76.899	Saimiri_boliviensis_boliviensis
ENSHCOG00000011751	polr3f	100	59.810	ENSSHAG00000018160	POLR3F	100	59.813	Sarcophilus_harrisii
ENSHCOG00000011751	polr3f	100	79.114	ENSSFOG00015022433	polr3f	100	79.114	Scleropages_formosus
ENSHCOG00000011751	polr3f	100	82.595	ENSSMAG00000021029	polr3f	100	82.595	Scophthalmus_maximus
ENSHCOG00000011751	polr3f	100	76.582	ENSSDUG00000022435	polr3f	100	76.582	Seriola_dumerili
ENSHCOG00000011751	polr3f	100	84.177	ENSSLDG00000012761	polr3f	100	84.177	Seriola_lalandi_dorsalis
ENSHCOG00000011751	polr3f	100	68.987	ENSSARG00000006039	POLR3F	100	68.987	Sorex_araneus
ENSHCOG00000011751	polr3f	100	76.582	ENSSPUG00000001873	POLR3F	100	76.582	Sphenodon_punctatus
ENSHCOG00000011751	polr3f	100	75.316	ENSSPAG00000002092	polr3f	100	75.316	Stegastes_partitus
ENSHCOG00000011751	polr3f	100	77.215	ENSSSCG00000007095	POLR3F	100	81.034	Sus_scrofa
ENSHCOG00000011751	polr3f	100	77.532	ENSTGUG00000005839	POLR3F	100	77.532	Taeniopygia_guttata
ENSHCOG00000011751	polr3f	100	81.962	ENSTRUG00000012101	polr3f	100	81.962	Takifugu_rubripes
ENSHCOG00000011751	polr3f	100	81.962	ENSTNIG00000006456	polr3f	100	81.962	Tetraodon_nigroviridis
ENSHCOG00000011751	polr3f	100	62.342	ENSTBEG00000007921	POLR3F	100	62.342	Tupaia_belangeri
ENSHCOG00000011751	polr3f	100	76.582	ENSTTRG00000002580	POLR3F	100	76.582	Tursiops_truncatus
ENSHCOG00000011751	polr3f	53	74.096	ENSUAMG00000024166	POLR3F	100	74.096	Ursus_americanus
ENSHCOG00000011751	polr3f	100	76.582	ENSUMAG00000024944	POLR3F	100	76.582	Ursus_maritimus
ENSHCOG00000011751	polr3f	100	77.215	ENSVPAG00000009063	POLR3F	100	77.215	Vicugna_pacos
ENSHCOG00000011751	polr3f	100	77.215	ENSVVUG00000012925	POLR3F	100	77.215	Vulpes_vulpes
ENSHCOG00000011751	polr3f	100	77.215	ENSXETG00000024898	polr3f	100	77.215	Xenopus_tropicalis
ENSHCOG00000011751	polr3f	87	82.182	ENSXCOG00000010301	polr3f	100	82.182	Xiphophorus_couchianus
ENSHCOG00000011751	polr3f	100	82.278	ENSXMAG00000004604	polr3f	100	82.278	Xiphophorus_maculatus