EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000011809 (Gene tree)
Gene ID: 109511387
Gene Symbol: pop5
Alias: fc69d03|wu:fc69d03|wu:fy24c05|zgc:110616
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3755 bases
Position: chrKV879800.1:2511541-2515295
Accession: 109511387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023374	RNase_P_Rpp14	PF01900.19	3.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015510	-	1457	XM_019862464	ENSHCOP00000023374	163 (aa)	XP_019718023	UPI00094F03FB

Gene Model

Click here to download ENSHCOG00000011809's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011809	pop5	87	53.521	ENSG00000167272	POP5	91	51.007	Homo_sapiens
ENSHCOG00000011809	pop5	93	74.172	ENSAPOG00000023686	POP5	90	74.172	Acanthochromis_polyacanthus
ENSHCOG00000011809	pop5	99	49.697	ENSAMEG00000008503	POP5	88	50.331	Ailuropoda_melanoleuca
ENSHCOG00000011809	pop5	94	77.124	ENSACIG00000018362	pop5	91	77.483	Amphilophus_citrinellus
ENSHCOG00000011809	pop5	94	76.471	ENSAOCG00000001930	pop5	90	76.821	Amphiprion_ocellaris
ENSHCOG00000011809	pop5	94	77.124	ENSAPEG00000006795	pop5	90	77.483	Amphiprion_percula
ENSHCOG00000011809	pop5	90	80.272	ENSATEG00000016792	pop5	89	79.195	Anabas_testudineus
ENSHCOG00000011809	pop5	58	57.447	ENSAPLG00000015761	POP5	89	56.250	Anas_platyrhynchos
ENSHCOG00000011809	pop5	99	45.963	ENSACAG00000003091	POP5	89	48.299	Anolis_carolinensis
ENSHCOG00000011809	pop5	87	52.817	ENSANAG00000023744	POP5	87	52.817	Aotus_nancymaae
ENSHCOG00000011809	pop5	92	77.333	ENSACLG00000021131	-	89	77.333	Astatotilapia_calliptera
ENSHCOG00000011809	pop5	91	59.060	ENSAMXG00000038175	pop5	87	59.060	Astyanax_mexicanus
ENSHCOG00000011809	pop5	99	50.307	ENSBTAG00000005385	POP5	84	54.930	Bos_taurus
ENSHCOG00000011809	pop5	87	54.225	ENSCJAG00000001309	POP5	91	51.678	Callithrix_jacchus
ENSHCOG00000011809	pop5	99	50.920	ENSCAFG00000010389	POP5	88	51.678	Canis_familiaris
ENSHCOG00000011809	pop5	99	50.920	ENSCAFG00020020663	POP5	88	51.678	Canis_lupus_dingo
ENSHCOG00000011809	pop5	99	50.307	ENSCHIG00000016402	POP5	88	51.678	Capra_hircus
ENSHCOG00000011809	pop5	87	52.817	ENSTSYG00000027616	POP5	88	50.336	Carlito_syrichta
ENSHCOG00000011809	pop5	66	48.148	ENSCAPG00000016873	POP5	83	52.128	Cavia_aperea
ENSHCOG00000011809	pop5	100	47.853	ENSCPOG00000012337	POP5	89	50.336	Cavia_porcellus
ENSHCOG00000011809	pop5	87	53.521	ENSCCAG00000023154	POP5	91	51.007	Cebus_capucinus
ENSHCOG00000011809	pop5	87	53.521	ENSCATG00000036825	POP5	91	51.007	Cercocebus_atys
ENSHCOG00000011809	pop5	100	48.780	ENSCLAG00000007808	POP5	84	52.817	Chinchilla_lanigera
ENSHCOG00000011809	pop5	87	53.521	ENSCSAG00000002246	POP5	91	51.007	Chlorocebus_sabaeus
ENSHCOG00000011809	pop5	87	44.366	ENSCHOG00000013969	POP5	88	42.953	Choloepus_hoffmanni
ENSHCOG00000011809	pop5	99	53.086	ENSCPBG00000011331	POP5	88	55.782	Chrysemys_picta_bellii
ENSHCOG00000011809	pop5	87	52.817	ENSCANG00000028001	POP5	91	50.336	Colobus_angolensis_palliatus
ENSHCOG00000011809	pop5	99	49.383	ENSCGRG00001017974	Pop5	84	54.225	Cricetulus_griseus_chok1gshd
ENSHCOG00000011809	pop5	99	49.383	ENSCGRG00000010102	Pop5	84	54.225	Cricetulus_griseus_crigri
ENSHCOG00000011809	pop5	83	76.471	ENSCSEG00000011103	pop5	91	76.471	Cynoglossus_semilaevis
ENSHCOG00000011809	pop5	89	74.483	ENSCSEG00000008332	-	87	74.483	Cynoglossus_semilaevis
ENSHCOG00000011809	pop5	99	51.205	ENSCVAG00000009152	-	88	52.667	Cyprinodon_variegatus
ENSHCOG00000011809	pop5	90	56.376	ENSDARG00000053452	pop5	88	56.376	Danio_rerio
ENSHCOG00000011809	pop5	87	52.083	ENSDNOG00000012668	-	79	50.331	Dasypus_novemcinctus
ENSHCOG00000011809	pop5	87	52.817	ENSDNOG00000045952	-	88	51.007	Dasypus_novemcinctus
ENSHCOG00000011809	pop5	99	50.617	ENSDORG00000029401	Pop5	89	51.678	Dipodomys_ordii
ENSHCOG00000011809	pop5	88	31.250	FBgn0036696	CG14057	97	31.034	Drosophila_melanogaster
ENSHCOG00000011809	pop5	100	46.341	ENSETEG00000009283	POP5	88	47.651	Echinops_telfairi
ENSHCOG00000011809	pop5	97	39.873	ENSEBUG00000016369	pop5	88	41.667	Eptatretus_burgeri
ENSHCOG00000011809	pop5	87	52.817	ENSEASG00005004714	POP5	88	50.336	Equus_asinus_asinus
ENSHCOG00000011809	pop5	87	52.817	ENSECAG00000010012	POP5	88	50.336	Equus_caballus
ENSHCOG00000011809	pop5	99	61.728	ENSELUG00000023394	pop5	92	65.772	Esox_lucius
ENSHCOG00000011809	pop5	100	49.091	ENSFCAG00000042614	POP5	88	51.678	Felis_catus
ENSHCOG00000011809	pop5	91	57.718	ENSFALG00000007537	POP5	89	57.718	Ficedula_albicollis
ENSHCOG00000011809	pop5	100	47.853	ENSFDAG00000009972	POP5	85	52.113	Fukomys_damarensis
ENSHCOG00000011809	pop5	99	73.171	ENSFHEG00000022341	pop5	89	77.551	Fundulus_heteroclitus
ENSHCOG00000011809	pop5	80	67.939	ENSGMOG00000001073	pop5	99	67.939	Gadus_morhua
ENSHCOG00000011809	pop5	88	49.650	ENSGALG00000007124	POP5	51	49.650	Gallus_gallus
ENSHCOG00000011809	pop5	93	74.834	ENSGAFG00000005937	-	90	74.834	Gambusia_affinis
ENSHCOG00000011809	pop5	98	70.552	ENSGACG00000012710	-	92	74.667	Gasterosteus_aculeatus
ENSHCOG00000011809	pop5	99	53.086	ENSGAGG00000016005	POP5	88	55.782	Gopherus_agassizii
ENSHCOG00000011809	pop5	87	53.521	ENSGGOG00000013505	POP5	91	51.007	Gorilla_gorilla
ENSHCOG00000011809	pop5	92	78.000	ENSHBUG00000011718	-	89	78.000	Haplochromis_burtoni
ENSHCOG00000011809	pop5	100	48.466	ENSHGLG00000011786	POP5	90	50.331	Heterocephalus_glaber_female
ENSHCOG00000011809	pop5	100	48.466	ENSHGLG00100014284	POP5	90	50.331	Heterocephalus_glaber_male
ENSHCOG00000011809	pop5	90	60.544	ENSIPUG00000003437	pop5	88	60.544	Ictalurus_punctatus
ENSHCOG00000011809	pop5	99	48.765	ENSSTOG00000012577	POP5	89	49.669	Ictidomys_tridecemlineatus
ENSHCOG00000011809	pop5	87	54.225	ENSJJAG00000001080	Pop5	88	52.349	Jaculus_jaculus
ENSHCOG00000011809	pop5	92	76.000	ENSKMAG00000011158	-	88	76.000	Kryptolebias_marmoratus
ENSHCOG00000011809	pop5	97	70.886	ENSLBEG00000008652	pop5	81	74.497	Labrus_bergylta
ENSHCOG00000011809	pop5	90	53.333	ENSLACG00000018188	POP5	91	53.333	Latimeria_chalumnae
ENSHCOG00000011809	pop5	90	57.143	ENSLOCG00000002924	pop5	88	57.143	Lepisosteus_oculatus
ENSHCOG00000011809	pop5	99	47.561	ENSLAFG00000014545	POP5	84	52.083	Loxodonta_africana
ENSHCOG00000011809	pop5	87	53.521	ENSMFAG00000045933	POP5	95	51.007	Macaca_fascicularis
ENSHCOG00000011809	pop5	87	53.521	ENSMMUG00000040120	POP5	91	51.007	Macaca_mulatta
ENSHCOG00000011809	pop5	87	53.521	ENSMNEG00000041716	POP5	91	51.007	Macaca_nemestrina
ENSHCOG00000011809	pop5	87	54.225	ENSMLEG00000029377	POP5	91	51.678	Mandrillus_leucophaeus
ENSHCOG00000011809	pop5	92	76.000	ENSMAMG00000002108	pop5	90	76.000	Mastacembelus_armatus
ENSHCOG00000011809	pop5	92	78.000	ENSMZEG00005000069	-	89	78.000	Maylandia_zebra
ENSHCOG00000011809	pop5	99	50.000	ENSMAUG00000019670	Pop5	84	54.930	Mesocricetus_auratus
ENSHCOG00000011809	pop5	99	44.706	ENSMICG00000008692	POP5	88	50.336	Microcebus_murinus
ENSHCOG00000011809	pop5	99	49.383	ENSMOCG00000013322	Pop5	84	54.225	Microtus_ochrogaster
ENSHCOG00000011809	pop5	87	73.944	ENSMMOG00000010471	pop5	87	73.944	Mola_mola
ENSHCOG00000011809	pop5	99	52.469	ENSMODG00000003066	POP5	61	53.691	Monodelphis_domestica
ENSHCOG00000011809	pop5	90	75.510	ENSMALG00000017797	-	88	75.510	Monopterus_albus
ENSHCOG00000011809	pop5	99	49.693	MGP_CAROLIEiJ_G0027618	Pop5	84	53.521	Mus_caroli
ENSHCOG00000011809	pop5	99	49.693	ENSMUSG00000060152	Pop5	84	53.521	Mus_musculus
ENSHCOG00000011809	pop5	99	49.080	MGP_PahariEiJ_G0024198	Pop5	84	52.817	Mus_pahari
ENSHCOG00000011809	pop5	99	49.080	MGP_SPRETEiJ_G0028616	Pop5	84	52.817	Mus_spretus
ENSHCOG00000011809	pop5	87	52.113	ENSMPUG00000003221	POP5	88	49.664	Mustela_putorius_furo
ENSHCOG00000011809	pop5	99	51.220	ENSMLUG00000014657	POP5	90	51.656	Myotis_lucifugus
ENSHCOG00000011809	pop5	87	53.521	ENSNGAG00000002594	Pop5	83	53.521	Nannospalax_galili
ENSHCOG00000011809	pop5	85	65.217	ENSNBRG00000001020	-	100	65.217	Neolamprologus_brichardi
ENSHCOG00000011809	pop5	87	53.521	ENSNLEG00000015839	POP5	91	51.007	Nomascus_leucogenys
ENSHCOG00000011809	pop5	99	50.000	ENSMEUG00000015288	POP5	91	52.381	Notamacropus_eugenii
ENSHCOG00000011809	pop5	87	52.817	ENSOPRG00000004327	POP5	88	51.333	Ochotona_princeps
ENSHCOG00000011809	pop5	87	53.521	ENSODEG00000006549	-	88	51.007	Octodon_degus
ENSHCOG00000011809	pop5	86	50.000	ENSODEG00000010351	-	88	50.000	Octodon_degus
ENSHCOG00000011809	pop5	92	78.667	ENSONIG00000011172	pop5	89	78.667	Oreochromis_niloticus
ENSHCOG00000011809	pop5	67	54.128	ENSOANG00000001792	-	82	59.140	Ornithorhynchus_anatinus
ENSHCOG00000011809	pop5	87	52.817	ENSOCUG00000006537	POP5	87	50.336	Oryctolagus_cuniculus
ENSHCOG00000011809	pop5	96	65.663	ENSORLG00000014745	pop5	91	68.874	Oryzias_latipes
ENSHCOG00000011809	pop5	99	66.061	ENSORLG00020001168	pop5	90	69.536	Oryzias_latipes_hni
ENSHCOG00000011809	pop5	99	64.671	ENSORLG00015013535	pop5	91	67.974	Oryzias_latipes_hsok
ENSHCOG00000011809	pop5	99	67.879	ENSOMEG00000017643	pop5	90	71.333	Oryzias_melastigma
ENSHCOG00000011809	pop5	91	49.664	ENSOGAG00000008528	POP5	91	49.664	Otolemur_garnettii
ENSHCOG00000011809	pop5	99	49.697	ENSOARG00000012764	POP5	88	50.993	Ovis_aries
ENSHCOG00000011809	pop5	87	53.521	ENSPPAG00000043719	POP5	91	51.007	Pan_paniscus
ENSHCOG00000011809	pop5	100	49.091	ENSPPRG00000006474	POP5	88	51.678	Panthera_pardus
ENSHCOG00000011809	pop5	100	49.091	ENSPTIG00000012194	POP5	88	51.678	Panthera_tigris_altaica
ENSHCOG00000011809	pop5	87	53.521	ENSPTRG00000005543	POP5	91	51.007	Pan_troglodytes
ENSHCOG00000011809	pop5	87	53.521	ENSPANG00000014166	POP5	91	51.007	Papio_anubis
ENSHCOG00000011809	pop5	90	65.986	ENSPKIG00000025154	pop5	89	65.986	Paramormyrops_kingsleyae
ENSHCOG00000011809	pop5	66	54.206	ENSPSIG00000013154	POP5	77	57.895	Pelodiscus_sinensis
ENSHCOG00000011809	pop5	99	68.519	ENSPMGG00000000812	-	90	71.812	Periophthalmus_magnuspinnatus
ENSHCOG00000011809	pop5	99	48.148	ENSPEMG00000017493	Pop5	84	52.817	Peromyscus_maniculatus_bairdii
ENSHCOG00000011809	pop5	93	73.684	ENSPFOG00000013000	pop5	94	71.569	Poecilia_formosa
ENSHCOG00000011809	pop5	93	74.172	ENSPLAG00000014070	pop5	90	74.172	Poecilia_latipinna
ENSHCOG00000011809	pop5	93	74.834	ENSPMEG00000024039	pop5	90	74.834	Poecilia_mexicana
ENSHCOG00000011809	pop5	93	74.834	ENSPMEG00000012863	POP5	90	74.834	Poecilia_mexicana
ENSHCOG00000011809	pop5	93	76.821	ENSPREG00000020151	pop5	90	76.821	Poecilia_reticulata
ENSHCOG00000011809	pop5	87	54.225	ENSPPYG00000005036	POP5	77	51.678	Pongo_abelii
ENSHCOG00000011809	pop5	64	50.000	ENSPCAG00000004788	POP5	100	50.000	Procavia_capensis
ENSHCOG00000011809	pop5	99	50.307	ENSPCOG00000017618	POP5	88	50.336	Propithecus_coquereli
ENSHCOG00000011809	pop5	87	53.521	ENSPVAG00000002233	POP5	84	53.521	Pteropus_vampyrus
ENSHCOG00000011809	pop5	92	78.667	ENSPNYG00000002679	pop5	89	78.667	Pundamilia_nyererei
ENSHCOG00000011809	pop5	90	58.904	ENSPNAG00000012662	pop5	82	58.904	Pygocentrus_nattereri
ENSHCOG00000011809	pop5	96	49.367	ENSRNOG00000001199	Pop5	84	52.113	Rattus_norvegicus
ENSHCOG00000011809	pop5	87	52.817	ENSRBIG00000043505	POP5	90	52.817	Rhinopithecus_bieti
ENSHCOG00000011809	pop5	87	52.817	ENSRROG00000045063	POP5	90	52.817	Rhinopithecus_roxellana
ENSHCOG00000011809	pop5	87	53.521	ENSSBOG00000032691	POP5	100	52.941	Saimiri_boliviensis_boliviensis
ENSHCOG00000011809	pop5	90	62.585	ENSSFOG00015005630	pop5	88	62.585	Scleropages_formosus
ENSHCOG00000011809	pop5	94	72.903	ENSSMAG00000018868	pop5	90	73.684	Scophthalmus_maximus
ENSHCOG00000011809	pop5	99	73.939	ENSSDUG00000001282	-	90	76.667	Seriola_dumerili
ENSHCOG00000011809	pop5	99	71.515	ENSSLDG00000017031	pop5	90	74.667	Seriola_lalandi_dorsalis
ENSHCOG00000011809	pop5	99	71.515	ENSSLDG00000003801	-	90	74.667	Seriola_lalandi_dorsalis
ENSHCOG00000011809	pop5	64	51.923	ENSSARG00000005564	POP5	64	51.923	Sorex_araneus
ENSHCOG00000011809	pop5	90	54.422	ENSSPUG00000015531	POP5	88	54.422	Sphenodon_punctatus
ENSHCOG00000011809	pop5	90	77.551	ENSSPAG00000015306	pop5	88	77.551	Stegastes_partitus
ENSHCOG00000011809	pop5	99	49.080	ENSSSCG00000009912	POP5	88	50.336	Sus_scrofa
ENSHCOG00000011809	pop5	99	53.659	ENSTGUG00000009602	POP5	91	55.705	Taeniopygia_guttata
ENSHCOG00000011809	pop5	99	69.753	ENSTRUG00000016214	pop5	89	75.510	Takifugu_rubripes
ENSHCOG00000011809	pop5	98	70.440	ENSTNIG00000011465	pop5	85	76.056	Tetraodon_nigroviridis
ENSHCOG00000011809	pop5	87	52.817	ENSTBEG00000010131	POP5	84	52.817	Tupaia_belangeri
ENSHCOG00000011809	pop5	99	50.307	ENSTTRG00000000153	POP5	88	51.678	Tursiops_truncatus
ENSHCOG00000011809	pop5	98	48.447	ENSUAMG00000015541	POP5	68	48.980	Ursus_americanus
ENSHCOG00000011809	pop5	99	49.693	ENSUMAG00000006137	POP5	88	50.336	Ursus_maritimus
ENSHCOG00000011809	pop5	99	50.307	ENSVPAG00000010365	POP5	84	54.225	Vicugna_pacos
ENSHCOG00000011809	pop5	99	50.920	ENSVVUG00000021154	POP5	88	51.678	Vulpes_vulpes
ENSHCOG00000011809	pop5	60	62.887	ENSXETG00000031793	POP5	85	62.887	Xenopus_tropicalis
ENSHCOG00000011809	pop5	90	76.190	ENSXMAG00000003508	-	77	76.190	Xiphophorus_maculatus