EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000011981 (Gene tree)
Gene ID: 109526809
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 26987 bases
Position: chrKV880265.1:1369049-1396035
Accession: 109526809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023416	CPSF_A	PF03178.15	1.8e-98	1	1
ENSHCOP00000009472	CPSF_A	PF03178.15	8.2e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015611	-	3270	-	ENSHCOP00000009472	1089 (aa)	-	-
ENSHCOT00000015628	-	5160	XM_019888332	ENSHCOP00000023416	1217 (aa)	XP_019743891	UPI00094E1A15

Gene Model

Click here to download ENSHCOG00000011981's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000011981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000011981	sf3b3	100	92.687	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSHCOG00000011981	sf3b3	96	97.438	ENSAPOG00000006172	sf3b3	98	97.438	Acanthochromis_polyacanthus
ENSHCOG00000011981	sf3b3	100	92.541	ENSAMEG00000002187	SF3B3	100	92.541	Ailuropoda_melanoleuca
ENSHCOG00000011981	sf3b3	100	96.051	ENSACIG00000016487	sf3b3	100	96.051	Amphilophus_citrinellus
ENSHCOG00000011981	sf3b3	100	97.371	ENSAOCG00000007158	sf3b3	100	97.371	Amphiprion_ocellaris
ENSHCOG00000011981	sf3b3	100	97.371	ENSAPEG00000022786	sf3b3	100	97.371	Amphiprion_percula
ENSHCOG00000011981	sf3b3	100	98.028	ENSATEG00000013708	sf3b3	100	98.028	Anabas_testudineus
ENSHCOG00000011981	sf3b3	82	91.789	ENSAPLG00000004996	SF3B3	99	92.581	Anas_platyrhynchos
ENSHCOG00000011981	sf3b3	100	92.769	ENSACAG00000001817	SF3B3	100	92.769	Anolis_carolinensis
ENSHCOG00000011981	sf3b3	100	92.687	ENSANAG00000028001	SF3B3	100	92.687	Aotus_nancymaae
ENSHCOG00000011981	sf3b3	100	95.776	ENSACLG00000022555	sf3b3	100	95.776	Astatotilapia_calliptera
ENSHCOG00000011981	sf3b3	100	97.042	ENSAMXG00000003410	sf3b3	100	97.042	Astyanax_mexicanus
ENSHCOG00000011981	sf3b3	100	92.687	ENSBTAG00000010627	SF3B3	100	92.687	Bos_taurus
ENSHCOG00000011981	sf3b3	100	59.854	WBGene00019323	teg-4	100	59.854	Caenorhabditis_elegans
ENSHCOG00000011981	sf3b3	100	92.687	ENSCJAG00000014773	SF3B3	99	92.687	Callithrix_jacchus
ENSHCOG00000011981	sf3b3	100	92.769	ENSCAFG00000020151	SF3B3	100	92.769	Canis_familiaris
ENSHCOG00000011981	sf3b3	100	92.769	ENSCAFG00020020912	SF3B3	100	92.769	Canis_lupus_dingo
ENSHCOG00000011981	sf3b3	100	92.769	ENSCHIG00000019822	SF3B3	100	92.769	Capra_hircus
ENSHCOG00000011981	sf3b3	100	92.687	ENSTSYG00000007910	SF3B3	100	92.687	Carlito_syrichta
ENSHCOG00000011981	sf3b3	84	78.719	ENSCAPG00000001484	SF3B3	92	78.719	Cavia_aperea
ENSHCOG00000011981	sf3b3	100	91.372	ENSCPOG00000000586	SF3B3	100	91.372	Cavia_porcellus
ENSHCOG00000011981	sf3b3	100	92.687	ENSCCAG00000017736	SF3B3	100	92.687	Cebus_capucinus
ENSHCOG00000011981	sf3b3	100	92.687	ENSCATG00000036562	SF3B3	100	92.687	Cercocebus_atys
ENSHCOG00000011981	sf3b3	100	92.687	ENSCLAG00000003921	SF3B3	100	92.687	Chinchilla_lanigera
ENSHCOG00000011981	sf3b3	100	92.687	ENSCSAG00000004371	SF3B3	100	92.687	Chlorocebus_sabaeus
ENSHCOG00000011981	sf3b3	90	89.097	ENSCHOG00000001878	SF3B3	90	89.097	Choloepus_hoffmanni
ENSHCOG00000011981	sf3b3	100	92.523	ENSCPBG00000015853	SF3B3	100	92.523	Chrysemys_picta_bellii
ENSHCOG00000011981	sf3b3	100	79.228	ENSCING00000001342	-	100	79.228	Ciona_intestinalis
ENSHCOG00000011981	sf3b3	99	78.161	ENSCSAVG00000011454	-	100	78.161	Ciona_savignyi
ENSHCOG00000011981	sf3b3	100	89.236	ENSCANG00000042920	SF3B3	100	89.729	Colobus_angolensis_palliatus
ENSHCOG00000011981	sf3b3	100	92.605	ENSCGRG00001015908	Sf3b3	100	92.605	Cricetulus_griseus_chok1gshd
ENSHCOG00000011981	sf3b3	100	92.605	ENSCGRG00000010180	Sf3b3	100	92.605	Cricetulus_griseus_crigri
ENSHCOG00000011981	sf3b3	82	96.507	ENSCSEG00000014192	sf3b3	99	96.507	Cynoglossus_semilaevis
ENSHCOG00000011981	sf3b3	100	97.535	ENSCVAG00000010459	sf3b3	100	97.535	Cyprinodon_variegatus
ENSHCOG00000011981	sf3b3	100	96.549	ENSDARG00000103553	sf3b3	100	96.549	Danio_rerio
ENSHCOG00000011981	sf3b3	92	87.584	ENSDNOG00000043626	SF3B3	100	92.478	Dasypus_novemcinctus
ENSHCOG00000011981	sf3b3	100	92.687	ENSDORG00000014176	Sf3b3	100	92.687	Dipodomys_ordii
ENSHCOG00000011981	sf3b3	100	74.959	FBgn0035162	Sf3b3	100	74.959	Drosophila_melanogaster
ENSHCOG00000011981	sf3b3	84	95.699	ENSETEG00000002729	SF3B3	84	95.699	Echinops_telfairi
ENSHCOG00000011981	sf3b3	100	86.113	ENSEBUG00000006117	sf3b3	100	86.113	Eptatretus_burgeri
ENSHCOG00000011981	sf3b3	100	92.769	ENSEASG00005013376	SF3B3	100	92.769	Equus_asinus_asinus
ENSHCOG00000011981	sf3b3	100	92.769	ENSECAG00000014053	SF3B3	100	92.769	Equus_caballus
ENSHCOG00000011981	sf3b3	93	92.807	ENSEEUG00000015611	SF3B3	93	92.807	Erinaceus_europaeus
ENSHCOG00000011981	sf3b3	100	95.738	ENSELUG00000015417	sf3b3	100	95.738	Esox_lucius
ENSHCOG00000011981	sf3b3	100	92.769	ENSFCAG00000009487	SF3B3	100	92.769	Felis_catus
ENSHCOG00000011981	sf3b3	100	92.276	ENSFALG00000007372	SF3B3	100	92.276	Ficedula_albicollis
ENSHCOG00000011981	sf3b3	100	92.687	ENSFDAG00000002608	SF3B3	100	92.687	Fukomys_damarensis
ENSHCOG00000011981	sf3b3	100	97.864	ENSFHEG00000017824	sf3b3	100	97.864	Fundulus_heteroclitus
ENSHCOG00000011981	sf3b3	100	93.103	ENSGMOG00000008139	sf3b3	100	93.103	Gadus_morhua
ENSHCOG00000011981	sf3b3	100	92.523	ENSGALG00000002531	SF3B3	100	92.523	Gallus_gallus
ENSHCOG00000011981	sf3b3	100	97.371	ENSGAFG00000015206	sf3b3	100	97.371	Gambusia_affinis
ENSHCOG00000011981	sf3b3	100	97.126	ENSGACG00000002646	sf3b3	100	97.126	Gasterosteus_aculeatus
ENSHCOG00000011981	sf3b3	96	92.570	ENSGAGG00000006746	SF3B3	97	92.570	Gopherus_agassizii
ENSHCOG00000011981	sf3b3	100	92.687	ENSGGOG00000003246	SF3B3	100	92.687	Gorilla_gorilla
ENSHCOG00000011981	sf3b3	100	90.542	ENSHBUG00000005960	sf3b3	100	91.552	Haplochromis_burtoni
ENSHCOG00000011981	sf3b3	100	92.687	ENSHGLG00000010135	SF3B3	100	92.687	Heterocephalus_glaber_female
ENSHCOG00000011981	sf3b3	100	90.592	ENSHGLG00100011148	SF3B3	100	90.592	Heterocephalus_glaber_male
ENSHCOG00000011981	sf3b3	100	97.042	ENSIPUG00000020435	sf3b3	100	97.042	Ictalurus_punctatus
ENSHCOG00000011981	sf3b3	100	92.687	ENSSTOG00000007065	SF3B3	100	92.687	Ictidomys_tridecemlineatus
ENSHCOG00000011981	sf3b3	100	92.687	ENSJJAG00000003948	Sf3b3	100	92.687	Jaculus_jaculus
ENSHCOG00000011981	sf3b3	100	95.152	ENSKMAG00000004066	sf3b3	99	97.267	Kryptolebias_marmoratus
ENSHCOG00000011981	sf3b3	100	97.535	ENSLBEG00000018302	sf3b3	100	97.535	Labrus_bergylta
ENSHCOG00000011981	sf3b3	98	89.535	ENSLACG00000012501	SF3B3	99	89.535	Latimeria_chalumnae
ENSHCOG00000011981	sf3b3	100	96.141	ENSLOCG00000007566	sf3b3	100	96.141	Lepisosteus_oculatus
ENSHCOG00000011981	sf3b3	100	92.769	ENSLAFG00000012219	SF3B3	100	92.769	Loxodonta_africana
ENSHCOG00000011981	sf3b3	100	92.687	ENSMFAG00000045487	SF3B3	100	92.687	Macaca_fascicularis
ENSHCOG00000011981	sf3b3	100	92.687	ENSMMUG00000017812	SF3B3	100	92.687	Macaca_mulatta
ENSHCOG00000011981	sf3b3	100	92.687	ENSMNEG00000033385	SF3B3	100	92.687	Macaca_nemestrina
ENSHCOG00000011981	sf3b3	100	89.154	ENSMLEG00000043891	SF3B3	100	89.154	Mandrillus_leucophaeus
ENSHCOG00000011981	sf3b3	100	97.699	ENSMAMG00000016837	sf3b3	100	97.699	Mastacembelus_armatus
ENSHCOG00000011981	sf3b3	100	97.699	ENSMZEG00005010836	sf3b3	100	97.699	Maylandia_zebra
ENSHCOG00000011981	sf3b3	96	95.619	ENSMZEG00005026015	sf3b3	99	95.619	Maylandia_zebra
ENSHCOG00000011981	sf3b3	100	92.523	ENSMGAG00000001597	SF3B3	100	92.523	Meleagris_gallopavo
ENSHCOG00000011981	sf3b3	81	76.404	ENSMAUG00000013618	Sf3b3	95	76.779	Mesocricetus_auratus
ENSHCOG00000011981	sf3b3	100	91.632	ENSMICG00000001363	SF3B3	100	91.632	Microcebus_murinus
ENSHCOG00000011981	sf3b3	100	92.605	ENSMOCG00000006108	Sf3b3	100	92.605	Microtus_ochrogaster
ENSHCOG00000011981	sf3b3	96	95.905	ENSMMOG00000002598	sf3b3	97	95.905	Mola_mola
ENSHCOG00000011981	sf3b3	100	88.670	ENSMODG00000014363	SF3B3	100	88.670	Monodelphis_domestica
ENSHCOG00000011981	sf3b3	100	97.371	ENSMALG00000008014	sf3b3	100	97.371	Monopterus_albus
ENSHCOG00000011981	sf3b3	100	92.605	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.605	Mus_caroli
ENSHCOG00000011981	sf3b3	100	92.605	ENSMUSG00000033732	Sf3b3	100	92.605	Mus_musculus
ENSHCOG00000011981	sf3b3	100	92.605	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.605	Mus_spretus
ENSHCOG00000011981	sf3b3	100	92.769	ENSMPUG00000010277	SF3B3	100	92.769	Mustela_putorius_furo
ENSHCOG00000011981	sf3b3	100	92.605	ENSMLUG00000014607	SF3B3	100	92.605	Myotis_lucifugus
ENSHCOG00000011981	sf3b3	100	92.687	ENSNGAG00000021903	Sf3b3	100	92.687	Nannospalax_galili
ENSHCOG00000011981	sf3b3	90	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSHCOG00000011981	sf3b3	100	91.215	ENSNLEG00000016127	SF3B3	100	91.215	Nomascus_leucogenys
ENSHCOG00000011981	sf3b3	92	88.874	ENSMEUG00000004479	SF3B3	94	88.874	Notamacropus_eugenii
ENSHCOG00000011981	sf3b3	98	89.606	ENSOPRG00000009847	SF3B3	100	89.606	Ochotona_princeps
ENSHCOG00000011981	sf3b3	100	92.687	ENSODEG00000014154	SF3B3	100	92.687	Octodon_degus
ENSHCOG00000011981	sf3b3	100	97.781	ENSONIG00000011198	sf3b3	100	97.781	Oreochromis_niloticus
ENSHCOG00000011981	sf3b3	100	92.851	ENSOANG00000001161	-	100	92.851	Ornithorhynchus_anatinus
ENSHCOG00000011981	sf3b3	100	90.715	ENSOCUG00000004139	SF3B3	100	90.715	Oryctolagus_cuniculus
ENSHCOG00000011981	sf3b3	100	97.288	ENSORLG00000013472	sf3b3	100	97.288	Oryzias_latipes
ENSHCOG00000011981	sf3b3	100	97.288	ENSORLG00020017473	sf3b3	100	97.288	Oryzias_latipes_hni
ENSHCOG00000011981	sf3b3	100	97.288	ENSORLG00015007710	sf3b3	100	97.288	Oryzias_latipes_hsok
ENSHCOG00000011981	sf3b3	100	97.124	ENSOMEG00000014483	sf3b3	100	97.124	Oryzias_melastigma
ENSHCOG00000011981	sf3b3	100	92.377	ENSOGAG00000016051	SF3B3	100	92.377	Otolemur_garnettii
ENSHCOG00000011981	sf3b3	100	92.541	ENSOARG00000004816	SF3B3	100	92.541	Ovis_aries
ENSHCOG00000011981	sf3b3	100	92.687	ENSPPAG00000026807	SF3B3	100	92.687	Pan_paniscus
ENSHCOG00000011981	sf3b3	100	92.769	ENSPPRG00000001686	SF3B3	100	92.769	Panthera_pardus
ENSHCOG00000011981	sf3b3	97	90.909	ENSPTIG00000020382	SF3B3	100	90.909	Panthera_tigris_altaica
ENSHCOG00000011981	sf3b3	100	92.687	ENSPTRG00000008308	SF3B3	100	92.687	Pan_troglodytes
ENSHCOG00000011981	sf3b3	100	92.687	ENSPANG00000024075	SF3B3	100	92.687	Papio_anubis
ENSHCOG00000011981	sf3b3	100	96.302	ENSPKIG00000002712	sf3b3	100	96.302	Paramormyrops_kingsleyae
ENSHCOG00000011981	sf3b3	97	87.971	ENSPSIG00000002232	SF3B3	100	92.640	Pelodiscus_sinensis
ENSHCOG00000011981	sf3b3	100	92.605	ENSPEMG00000008603	Sf3b3	100	92.605	Peromyscus_maniculatus_bairdii
ENSHCOG00000011981	sf3b3	100	90.058	ENSPMAG00000001793	sf3b3	100	90.058	Petromyzon_marinus
ENSHCOG00000011981	sf3b3	100	92.851	ENSPCIG00000014927	SF3B3	100	92.851	Phascolarctos_cinereus
ENSHCOG00000011981	sf3b3	100	97.699	ENSPFOG00000015516	sf3b3	100	97.699	Poecilia_formosa
ENSHCOG00000011981	sf3b3	100	97.699	ENSPLAG00000014330	sf3b3	100	97.699	Poecilia_latipinna
ENSHCOG00000011981	sf3b3	100	97.781	ENSPMEG00000019856	sf3b3	100	97.781	Poecilia_mexicana
ENSHCOG00000011981	sf3b3	81	97.866	ENSPREG00000019669	sf3b3	97	97.866	Poecilia_reticulata
ENSHCOG00000011981	sf3b3	95	97.297	ENSPPYG00000007539	SF3B3	100	92.405	Pongo_abelii
ENSHCOG00000011981	sf3b3	100	71.980	ENSPCAG00000002623	SF3B3	100	71.980	Procavia_capensis
ENSHCOG00000011981	sf3b3	84	97.196	ENSPCOG00000026582	SF3B3	100	97.196	Propithecus_coquereli
ENSHCOG00000011981	sf3b3	100	92.687	ENSPVAG00000000684	SF3B3	100	92.687	Pteropus_vampyrus
ENSHCOG00000011981	sf3b3	100	97.617	ENSPNYG00000003528	sf3b3	100	97.617	Pundamilia_nyererei
ENSHCOG00000011981	sf3b3	100	96.878	ENSPNAG00000015419	sf3b3	100	96.878	Pygocentrus_nattereri
ENSHCOG00000011981	sf3b3	100	92.605	ENSRNOG00000017724	Sf3b3	100	92.605	Rattus_norvegicus
ENSHCOG00000011981	sf3b3	100	92.687	ENSRBIG00000021904	SF3B3	100	92.687	Rhinopithecus_bieti
ENSHCOG00000011981	sf3b3	100	92.687	ENSRROG00000045703	SF3B3	100	92.687	Rhinopithecus_roxellana
ENSHCOG00000011981	sf3b3	76	41.935	YML049C	-	75	41.935	Saccharomyces_cerevisiae
ENSHCOG00000011981	sf3b3	100	92.687	ENSSBOG00000029156	SF3B3	100	92.687	Saimiri_boliviensis_boliviensis
ENSHCOG00000011981	sf3b3	100	92.851	ENSSHAG00000000372	SF3B3	100	92.851	Sarcophilus_harrisii
ENSHCOG00000011981	sf3b3	100	96.631	ENSSFOG00015012877	sf3b3	100	96.631	Scleropages_formosus
ENSHCOG00000011981	sf3b3	100	96.878	ENSSMAG00000014386	sf3b3	100	96.878	Scophthalmus_maximus
ENSHCOG00000011981	sf3b3	100	97.781	ENSSDUG00000021201	sf3b3	100	97.781	Seriola_dumerili
ENSHCOG00000011981	sf3b3	100	97.781	ENSSLDG00000017532	sf3b3	100	97.781	Seriola_lalandi_dorsalis
ENSHCOG00000011981	sf3b3	93	93.478	ENSSARG00000006917	SF3B3	93	93.478	Sorex_araneus
ENSHCOG00000011981	sf3b3	100	92.523	ENSSPUG00000006253	SF3B3	100	92.523	Sphenodon_punctatus
ENSHCOG00000011981	sf3b3	100	90.058	ENSSPAG00000003125	sf3b3	100	90.058	Stegastes_partitus
ENSHCOG00000011981	sf3b3	100	92.769	ENSSSCG00000025323	SF3B3	100	92.769	Sus_scrofa
ENSHCOG00000011981	sf3b3	100	92.447	ENSTGUG00000006082	SF3B3	100	92.447	Taeniopygia_guttata
ENSHCOG00000011981	sf3b3	55	82.500	ENSTRUG00000015623	sf3b3	89	86.949	Takifugu_rubripes
ENSHCOG00000011981	sf3b3	89	96.967	ENSTNIG00000004857	sf3b3	100	96.967	Tetraodon_nigroviridis
ENSHCOG00000011981	sf3b3	93	78.433	ENSTBEG00000002946	SF3B3	100	78.433	Tupaia_belangeri
ENSHCOG00000011981	sf3b3	100	92.030	ENSTTRG00000005855	SF3B3	100	92.030	Tursiops_truncatus
ENSHCOG00000011981	sf3b3	100	92.769	ENSUAMG00000006780	SF3B3	100	92.769	Ursus_americanus
ENSHCOG00000011981	sf3b3	100	92.769	ENSUMAG00000017757	SF3B3	100	92.769	Ursus_maritimus
ENSHCOG00000011981	sf3b3	100	77.650	ENSVPAG00000003202	SF3B3	100	77.650	Vicugna_pacos
ENSHCOG00000011981	sf3b3	100	92.769	ENSVVUG00000017922	SF3B3	100	92.769	Vulpes_vulpes
ENSHCOG00000011981	sf3b3	100	93.098	ENSXETG00000032869	SF3B3	100	93.098	Xenopus_tropicalis
ENSHCOG00000011981	sf3b3	77	97.983	ENSXCOG00000013628	sf3b3	97	97.983	Xiphophorus_couchianus
ENSHCOG00000011981	sf3b3	100	97.535	ENSXMAG00000006334	sf3b3	100	97.535	Xiphophorus_maculatus