EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012026 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8831 bases
Position: chrKV880187.1:71456-80286
Accession: 109523006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009550	MMR_HSR1	PF01926.23	2.3e-06	1	1
ENSHCOP00000023464	MMR_HSR1	PF01926.23	5.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015710	-	1728	-	ENSHCOP00000023464	575 (aa)	-	-
ENSHCOT00000025846	-	1923	XM_019881842	ENSHCOP00000009550	593 (aa)	XP_019737401	-

Gene Model

Click here to download ENSHCOG00000012026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012026	zgc:162879	99	34.105	ENSHCOG00000010976	rasef	89	32.991

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012026	zgc:162879	99	57.521	ENSAPOG00000008539	zgc:162879	91	57.190	Acanthochromis_polyacanthus
ENSHCOG00000012026	zgc:162879	99	59.669	ENSACIG00000023717	zgc:162879	100	51.048	Amphilophus_citrinellus
ENSHCOG00000012026	zgc:162879	84	58.416	ENSAOCG00000006210	zgc:162879	87	54.122	Amphiprion_ocellaris
ENSHCOG00000012026	zgc:162879	99	58.843	ENSAPEG00000017489	zgc:162879	99	52.640	Amphiprion_percula
ENSHCOG00000012026	zgc:162879	99	59.180	ENSATEG00000006102	zgc:162879	91	58.852	Anabas_testudineus
ENSHCOG00000012026	zgc:162879	99	58.775	ENSACLG00000021066	zgc:162879	100	50.977	Astatotilapia_calliptera
ENSHCOG00000012026	zgc:162879	99	51.461	ENSAMXG00000007430	zgc:162879	99	45.081	Astyanax_mexicanus
ENSHCOG00000012026	zgc:162879	84	54.274	ENSCSEG00000013699	zgc:162879	90	47.482	Cynoglossus_semilaevis
ENSHCOG00000012026	zgc:162879	99	54.591	ENSCVAG00000014510	zgc:162879	99	46.596	Cyprinodon_variegatus
ENSHCOG00000012026	zgc:162879	99	49.755	ENSDARG00000074163	zgc:162879	99	44.444	Danio_rerio
ENSHCOG00000012026	zgc:162879	100	51.391	ENSELUG00000019483	zgc:162879	100	50.162	Esox_lucius
ENSHCOG00000012026	zgc:162879	75	55.011	ENSFHEG00000022549	zgc:162879	89	56.501	Fundulus_heteroclitus
ENSHCOG00000012026	zgc:162879	99	54.967	ENSGAFG00000001313	zgc:162879	100	47.226	Gambusia_affinis
ENSHCOG00000012026	zgc:162879	99	55.678	ENSGACG00000010798	zgc:162879	99	46.983	Gasterosteus_aculeatus
ENSHCOG00000012026	zgc:162879	99	58.525	ENSHBUG00000016335	zgc:162879	100	52.866	Haplochromis_burtoni
ENSHCOG00000012026	zgc:162879	99	51.987	ENSKMAG00000016246	zgc:162879	67	60.142	Kryptolebias_marmoratus
ENSHCOG00000012026	zgc:162879	99	57.026	ENSLBEG00000006690	zgc:162879	100	49.684	Labrus_bergylta
ENSHCOG00000012026	zgc:162879	80	52.000	ENSLACG00000014082	-	68	52.632	Latimeria_chalumnae
ENSHCOG00000012026	zgc:162879	99	49.433	ENSLOCG00000014347	zgc:162879	98	43.343	Lepisosteus_oculatus
ENSHCOG00000012026	zgc:162879	99	57.285	ENSMAMG00000008875	zgc:162879	100	52.262	Mastacembelus_armatus
ENSHCOG00000012026	zgc:162879	99	58.292	ENSMZEG00005022256	zgc:162879	100	52.411	Maylandia_zebra
ENSHCOG00000012026	zgc:162879	99	52.824	ENSNBRG00000020110	zgc:162879	100	49.845	Neolamprologus_brichardi
ENSHCOG00000012026	zgc:162879	99	55.418	ENSONIG00000015165	zgc:162879	90	66.071	Oreochromis_niloticus
ENSHCOG00000012026	zgc:162879	99	53.388	ENSORLG00015017960	zgc:162879	99	46.979	Oryzias_latipes_hsok
ENSHCOG00000012026	zgc:162879	99	48.833	ENSPKIG00000020661	zgc:162879	99	47.685	Paramormyrops_kingsleyae
ENSHCOG00000012026	zgc:162879	99	54.801	ENSPFOG00000006354	zgc:162879	99	45.796	Poecilia_formosa
ENSHCOG00000012026	zgc:162879	99	54.967	ENSPLAG00000020643	zgc:162879	99	45.946	Poecilia_latipinna
ENSHCOG00000012026	zgc:162879	99	54.636	ENSPMEG00000014713	zgc:162879	100	46.246	Poecilia_mexicana
ENSHCOG00000012026	zgc:162879	99	55.833	ENSPNYG00000010530	zgc:162879	100	50.700	Pundamilia_nyererei
ENSHCOG00000012026	zgc:162879	99	49.353	ENSPNAG00000012022	zgc:162879	99	43.805	Pygocentrus_nattereri
ENSHCOG00000012026	zgc:162879	93	43.322	ENSSFOG00015023774	zgc:162879	79	46.304	Scleropages_formosus
ENSHCOG00000012026	zgc:162879	99	57.096	ENSSMAG00000001513	zgc:162879	95	56.931	Scophthalmus_maximus
ENSHCOG00000012026	zgc:162879	99	60.000	ENSSDUG00000011478	zgc:162879	91	59.672	Seriola_dumerili
ENSHCOG00000012026	zgc:162879	99	60.000	ENSSLDG00000000877	zgc:162879	91	59.672	Seriola_lalandi_dorsalis
ENSHCOG00000012026	zgc:162879	95	55.459	ENSSPAG00000010598	zgc:162879	99	48.657	Stegastes_partitus
ENSHCOG00000012026	zgc:162879	95	66.667	ENSTNIG00000019239	zgc:162879	88	66.667	Tetraodon_nigroviridis
ENSHCOG00000012026	zgc:162879	99	37.406	ENSXETG00000015491	rasef	90	46.429	Xenopus_tropicalis
ENSHCOG00000012026	zgc:162879	75	54.688	ENSXCOG00000020244	zgc:162879	88	55.981	Xiphophorus_couchianus
ENSHCOG00000012026	zgc:162879	99	55.648	ENSXMAG00000002846	zgc:162879	91	55.298	Xiphophorus_maculatus