EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000012067 (Gene tree)
Gene ID
109510898
Gene Symbol
-
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
17530 bases
Position
chrKV879800.1:2475658-2493187
Accession
109510898
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000009460RRM_1PF00076.221.3e-2812
ENSHCOP00000009460RRM_1PF00076.221.3e-2822
ENSHCOP00000023405RRM_1PF00076.221.6e-2812
ENSHCOP00000023405RRM_1PF00076.221.6e-2822
ENSHCOP00000009443RRM_1PF00076.228.6e-2212
ENSHCOP00000009443RRM_1PF00076.228.6e-2222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000015576-465-ENSHCOP00000009443154 (aa)--
ENSHCOT00000015601-1059XM_019861579ENSHCOP00000023405352 (aa)XP_019717138-
ENSHCOT00000025813-1002-ENSHCOP00000009460333 (aa)--
Gene Model
Click here to download ENSHCOG00000012067's gene model file
Pathways
Pathway IDPathway NameSource
hcq03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012067's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000012067-9771.705ENSHCOG00000000266msi2a9663.714
ENSHCOG00000012067-8990.541ENSHCOG00000012019MSI110090.541
ENSHCOG00000012067-8136.220ENSHCOG00000000313HNRNPA36535.115
ENSHCOG00000012067-7541.304ENSHCOG00000000137rbm24b8633.803
ENSHCOG00000012067-9568.148ENSHCOG00000017241-7368.605
ENSHCOG00000012067-7554.762ENSHCOG00000000087hnrnpd8339.669
ENSHCOG00000012067-7947.619ENSHCOG00000009363-7641.333
ENSHCOG00000012067-8532.727ENSHCOG00000007174HNRNPA09034.177
ENSHCOG00000012067-7341.304ENSHCOG00000019356rbm24a7841.304
ENSHCOG00000012067-7752.381ENSHCOG00000015341hnrnpaba7545.690
ENSHCOG00000012067-5030.058ENSHCOG00000012571rbm14b8830.189
ENSHCOG00000012067-7739.167ENSHCOG00000019526hnrnpa1b7935.632
ENSHCOG00000012067-8732.836ENSHCOG00000007180-9832.468
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000012067-10078.689ENSG00000135097MSI19987.069Homo_sapiens
ENSHCOG00000012067-10087.571ENSAPOG00000003191MSI110087.571Acanthochromis_polyacanthus
ENSHCOG00000012067-10092.635ENSAPOG00000023458-10092.635Acanthochromis_polyacanthus
ENSHCOG00000012067-7790.678ENSAMEG00000013302MSI110066.851Ailuropoda_melanoleuca
ENSHCOG00000012067-8593.310ENSACIG00000017754-7889.527Amphilophus_citrinellus
ENSHCOG00000012067-8990.635ENSAOCG00000009031-9590.635Amphiprion_ocellaris
ENSHCOG00000012067-10087.571ENSAOCG00000003804MSI110087.571Amphiprion_ocellaris
ENSHCOG00000012067-10092.635ENSAPEG00000006857-8492.635Amphiprion_percula
ENSHCOG00000012067-10087.571ENSAPEG00000003245MSI110087.571Amphiprion_percula
ENSHCOG00000012067-10092.676ENSATEG00000017059MSI110092.676Anabas_testudineus
ENSHCOG00000012067-10082.548ENSATEG00000023779-10082.548Anabas_testudineus
ENSHCOG00000012067-10078.630ENSACAG00000002762MSI110079.452Anolis_carolinensis
ENSHCOG00000012067-10078.689ENSANAG00000027151MSI110078.689Aotus_nancymaae
ENSHCOG00000012067-7787.288ENSANAG00000027901-8878.966Aotus_nancymaae
ENSHCOG00000012067-10092.614ENSACLG00000000117-10098.095Astatotilapia_calliptera
ENSHCOG00000012067-10087.606ENSACLG00000011230MSI110087.606Astatotilapia_calliptera
ENSHCOG00000012067-9092.114ENSAMXG00000038960msi17692.114Astyanax_mexicanus
ENSHCOG00000012067-10078.689ENSBTAG00000009800MSI110085.161Bos_taurus
ENSHCOG00000012067-10078.689ENSCJAG00000008578MSI110078.689Callithrix_jacchus
ENSHCOG00000012067-10078.415ENSCAFG00000010283MSI110078.415Canis_familiaris
ENSHCOG00000012067-8984.566ENSCAFG00020020585MSI110084.566Canis_lupus_dingo
ENSHCOG00000012067-10076.550ENSCHIG00000024304MSI110076.550Capra_hircus
ENSHCOG00000012067-8983.792ENSTSYG00000033949MSI19583.792Carlito_syrichta
ENSHCOG00000012067-7795.161ENSCAPG00000003919MSI18975.399Cavia_aperea
ENSHCOG00000012067-8983.891ENSCPOG00000012361MSI110083.891Cavia_porcellus
ENSHCOG00000012067-10078.689ENSCCAG00000035567MSI110078.689Cebus_capucinus
ENSHCOG00000012067-10078.689ENSCATG00000030019MSI110078.689Cercocebus_atys
ENSHCOG00000012067-8983.891ENSCLAG00000011329MSI110083.891Chinchilla_lanigera
ENSHCOG00000012067-7790.678ENSCSAG00000002265MSI19677.936Chlorocebus_sabaeus
ENSHCOG00000012067-10081.972ENSCPBG00000011349MSI110081.972Chrysemys_picta_bellii
ENSHCOG00000012067-8983.841ENSCANG00000040651MSI110083.841Colobus_angolensis_palliatus
ENSHCOG00000012067-10078.689ENSCGRG00001018883Msi110078.689Cricetulus_griseus_chok1gshd
ENSHCOG00000012067-9083.384ENSCGRG00000002191Msi17283.384Cricetulus_griseus_crigri
ENSHCOG00000012067-8994.257ENSCSEG00000011032MSI110094.257Cynoglossus_semilaevis
ENSHCOG00000012067-10087.288ENSCSEG00000005834-10087.288Cynoglossus_semilaevis
ENSHCOG00000012067-10091.761ENSCSEG00000008352-10091.761Cynoglossus_semilaevis
ENSHCOG00000012067-10092.045ENSCVAG00000009100MSI110092.045Cyprinodon_variegatus
ENSHCOG00000012067-6274.194ENSCVAG00000017463-8974.194Cyprinodon_variegatus
ENSHCOG00000012067-8653.390ENSCVAG00000017430zgc:1107969455.072Cyprinodon_variegatus
ENSHCOG00000012067-8993.243ENSDARG00000010710msi110093.925Danio_rerio
ENSHCOG00000012067-7373.684ENSDARG00000041299zgc:1107969872.917Danio_rerio
ENSHCOG00000012067-7891.163ENSDARG00000102015CABZ01037298.19791.163Danio_rerio
ENSHCOG00000012067-9080.503ENSDNOG00000005713MSI19280.503Dasypus_novemcinctus
ENSHCOG00000012067-9182.883ENSDORG00000005610Msi19383.891Dipodomys_ordii
ENSHCOG00000012067-8980.793ENSETEG00000004756MSI110080.793Echinops_telfairi
ENSHCOG00000012067-10079.539ENSEASG00005004736MSI110079.539Equus_asinus_asinus
ENSHCOG00000012067-10078.689ENSECAG00000017526MSI110078.689Equus_caballus
ENSHCOG00000012067-8987.055ENSELUG00000023280-10086.731Esox_lucius
ENSHCOG00000012067-9683.235ENSELUG00000023219MSI19288.690Esox_lucius
ENSHCOG00000012067-10078.689ENSFCAG00000011007MSI110078.689Felis_catus
ENSHCOG00000012067-8988.333ENSFALG00000007574MSI110088.333Ficedula_albicollis
ENSHCOG00000012067-8983.537ENSFDAG00000019586MSI110083.537Fukomys_damarensis
ENSHCOG00000012067-10087.571ENSFHEG00000003560-10087.571Fundulus_heteroclitus
ENSHCOG00000012067-10092.635ENSFHEG00000022446MSI110092.635Fundulus_heteroclitus
ENSHCOG00000012067-10089.773ENSGMOG00000001006MSI19989.489Gadus_morhua
ENSHCOG00000012067-10078.492ENSGMOG00000017838-10078.492Gadus_morhua
ENSHCOG00000012067-8987.786ENSGALG00000007227MSI19871.543Gallus_gallus
ENSHCOG00000012067-8991.746ENSGAFG00000021522MSI19491.746Gambusia_affinis
ENSHCOG00000012067-10078.144ENSGAFG00000005860-10078.144Gambusia_affinis
ENSHCOG00000012067-10091.785ENSGACG00000012679MSI110091.785Gasterosteus_aculeatus
ENSHCOG00000012067-10079.726ENSGACG00000008674-10079.726Gasterosteus_aculeatus
ENSHCOG00000012067-10083.036ENSGAGG00000016037MSI110083.036Gopherus_agassizii
ENSHCOG00000012067-8984.395ENSGGOG00000010328MSI110084.395Gorilla_gorilla
ENSHCOG00000012067-10087.606ENSHBUG00000021921MSI110087.606Haplochromis_burtoni
ENSHCOG00000012067-10092.614ENSHBUG00000011841-10092.614Haplochromis_burtoni
ENSHCOG00000012067-10078.415ENSHGLG00000012782MSI110078.415Heterocephalus_glaber_female
ENSHCOG00000012067-8983.537ENSHGLG00100016848MSI110083.537Heterocephalus_glaber_male
ENSHCOG00000012067-10086.119ENSIPUG00000001976msi19991.582Ictalurus_punctatus
ENSHCOG00000012067-8984.566ENSSTOG00000009799MSI110084.566Ictidomys_tridecemlineatus
ENSHCOG00000012067-10078.689ENSJJAG00000010463Msi110078.689Jaculus_jaculus
ENSHCOG00000012067-10069.653ENSJJAG00000010643-10069.653Jaculus_jaculus
ENSHCOG00000012067-8991.892ENSKMAG00000019877-10091.892Kryptolebias_marmoratus
ENSHCOG00000012067-10092.898ENSKMAG00000011251MSI110092.898Kryptolebias_marmoratus
ENSHCOG00000012067-10092.635ENSLBEG00000008789MSI110092.635Labrus_bergylta
ENSHCOG00000012067-10087.571ENSLBEG00000001375-10087.571Labrus_bergylta
ENSHCOG00000012067-8982.371ENSLACG00000018287MSI110082.371Latimeria_chalumnae
ENSHCOG00000012067-8662.500ENSLOCG00000008618zgc:1107967164.035Lepisosteus_oculatus
ENSHCOG00000012067-8975.738ENSLAFG00000009412MSI110075.738Loxodonta_africana
ENSHCOG00000012067-8983.891ENSMFAG00000001798MSI110083.891Macaca_fascicularis
ENSHCOG00000012067-8983.891ENSMMUG00000031527MSI19783.891Macaca_mulatta
ENSHCOG00000012067-10079.539ENSMNEG00000040034MSI110079.539Macaca_nemestrina
ENSHCOG00000012067-8983.841ENSMLEG00000003921MSI110083.841Mandrillus_leucophaeus
ENSHCOG00000012067-10087.006ENSMAMG00000018426-9592.230Mastacembelus_armatus
ENSHCOG00000012067-10091.761ENSMAMG00000002279MSI110091.761Mastacembelus_armatus
ENSHCOG00000012067-10092.614ENSMZEG00005000340-10092.614Maylandia_zebra
ENSHCOG00000012067-10087.606ENSMZEG00005026892MSI110087.606Maylandia_zebra
ENSHCOG00000012067-7795.000ENSMGAG00000016518-10093.491Meleagris_gallopavo
ENSHCOG00000012067-7790.678ENSMAUG00000016820Msi110088.261Mesocricetus_auratus
ENSHCOG00000012067-10078.689ENSMICG00000033181MSI110078.689Microcebus_murinus
ENSHCOG00000012067-10078.415ENSMOCG00000002286Msi110078.415Microtus_ochrogaster
ENSHCOG00000012067-8989.865ENSMMOG00000010492MSI19689.865Mola_mola
ENSHCOG00000012067-10084.384ENSMMOG00000012265-10084.384Mola_mola
ENSHCOG00000012067-7681.197ENSMODG00000003189-10056.928Monodelphis_domestica
ENSHCOG00000012067-8992.063ENSMALG00000001426-10092.063Monopterus_albus
ENSHCOG00000012067-10092.898ENSMALG00000017889MSI110092.898Monopterus_albus
ENSHCOG00000012067-10078.142MGP_CAROLIEiJ_G0027626Msi19987.925Mus_caroli
ENSHCOG00000012067-10078.142ENSMUSG00000054256Msi19987.925Mus_musculus
ENSHCOG00000012067-10080.791MGP_PahariEiJ_G0024206Msi19988.258Mus_pahari
ENSHCOG00000012067-10078.142MGP_SPRETEiJ_G0028624Msi19987.925Mus_spretus
ENSHCOG00000012067-8984.566ENSMPUG00000003168MSI110084.566Mustela_putorius_furo
ENSHCOG00000012067-8975.298ENSMLUG00000010313MSI110075.298Myotis_lucifugus
ENSHCOG00000012067-9083.133ENSNGAG00000014508Msi19283.133Nannospalax_galili
ENSHCOG00000012067-7371.053ENSNBRG00000018002zgc:1107969869.792Neolamprologus_brichardi
ENSHCOG00000012067-8884.426ENSNBRG00000018012MSI19984.426Neolamprologus_brichardi
ENSHCOG00000012067-10092.614ENSNBRG00000000841-10092.614Neolamprologus_brichardi
ENSHCOG00000012067-8974.390ENSNLEG00000015636MSI110074.390Nomascus_leucogenys
ENSHCOG00000012067-8964.024ENSMEUG00000015759MSI110064.024Notamacropus_eugenii
ENSHCOG00000012067-7691.453ENSOPRG00000016879MSI110076.825Ochotona_princeps
ENSHCOG00000012067-8983.841ENSODEG00000006328MSI110083.841Octodon_degus
ENSHCOG00000012067-10092.614ENSONIG00000011182MSI110092.614Oreochromis_niloticus
ENSHCOG00000012067-10084.511ENSONIG00000019452-10084.511Oreochromis_niloticus
ENSHCOG00000012067-8984.566ENSOCUG00000027716MSI110084.566Oryctolagus_cuniculus
ENSHCOG00000012067-10086.441ENSORLG00000029593MSI110086.441Oryzias_latipes
ENSHCOG00000012067-10091.785ENSORLG00000019978-10091.785Oryzias_latipes
ENSHCOG00000012067-10086.441ENSORLG00020008266MSI19991.892Oryzias_latipes_hni
ENSHCOG00000012067-10091.785ENSORLG00020001208-7191.785Oryzias_latipes_hni
ENSHCOG00000012067-10091.785ENSORLG00015013672-7691.317Oryzias_latipes_hsok
ENSHCOG00000012067-10086.441ENSORLG00015003916MSI19991.892Oryzias_latipes_hsok
ENSHCOG00000012067-10091.785ENSOMEG00000017536MSI110092.628Oryzias_melastigma
ENSHCOG00000012067-10086.723ENSOMEG00000002272-9792.063Oryzias_melastigma
ENSHCOG00000012067-9976.630ENSOGAG00000003847MSI19976.630Otolemur_garnettii
ENSHCOG00000012067-8981.212ENSOARG00000012097MSI110081.212Ovis_aries
ENSHCOG00000012067-8983.841ENSPPAG00000043073MSI110083.841Pan_paniscus
ENSHCOG00000012067-10078.689ENSPPRG00000000370MSI110078.689Panthera_pardus
ENSHCOG00000012067-8984.566ENSPTIG00000008913MSI110084.566Panthera_tigris_altaica
ENSHCOG00000012067-10078.689ENSPTRG00000005531MSI110078.689Pan_troglodytes
ENSHCOG00000012067-10078.415ENSPANG00000006335MSI110078.415Papio_anubis
ENSHCOG00000012067-10087.216ENSPKIG00000023575-10087.216Paramormyrops_kingsleyae
ENSHCOG00000012067-10088.352ENSPKIG00000016497MSI110088.352Paramormyrops_kingsleyae
ENSHCOG00000012067-7782.857ENSPSIG00000016295-9582.857Pelodiscus_sinensis
ENSHCOG00000012067-7879.825ENSPSIG00000009621-10079.825Pelodiscus_sinensis
ENSHCOG00000012067-8984.444ENSPSIG00000011608-9384.444Pelodiscus_sinensis
ENSHCOG00000012067-8597.173ENSPMGG00000000514MSI19797.173Periophthalmus_magnuspinnatus
ENSHCOG00000012067-7788.136ENSPMGG00000007743-9173.186Periophthalmus_magnuspinnatus
ENSHCOG00000012067-8983.587ENSPEMG00000010491Msi19383.587Peromyscus_maniculatus_bairdii
ENSHCOG00000012067-10087.571ENSPFOG00000008319-8687.571Poecilia_formosa
ENSHCOG00000012067-10092.068ENSPFOG00000013113MSI110092.068Poecilia_formosa
ENSHCOG00000012067-10092.068ENSPLAG00000014025-10092.068Poecilia_latipinna
ENSHCOG00000012067-10087.571ENSPLAG00000012431-9787.571Poecilia_latipinna
ENSHCOG00000012067-10092.068ENSPMEG00000012796MSI110092.068Poecilia_mexicana
ENSHCOG00000012067-10087.006ENSPMEG00000007025-9386.000Poecilia_mexicana
ENSHCOG00000012067-5471.910ENSPREG00000020265zgc:1107969172.897Poecilia_reticulata
ENSHCOG00000012067-7491.584ENSPREG00000014574-10091.584Poecilia_reticulata
ENSHCOG00000012067-9389.206ENSPREG00000021416-9689.206Poecilia_reticulata
ENSHCOG00000012067-10078.962ENSPPYG00000005027MSI110078.962Pongo_abelii
ENSHCOG00000012067-7795.161ENSPCAG00000002300MSI17289.340Procavia_capensis
ENSHCOG00000012067-10078.689ENSPCOG00000017341MSI110078.689Propithecus_coquereli
ENSHCOG00000012067-7790.598ENSPVAG00000002225MSI110068.293Pteropus_vampyrus
ENSHCOG00000012067-10087.606ENSPNYG00000004379MSI110087.606Pundamilia_nyererei
ENSHCOG00000012067-10092.614ENSPNYG00000002529-10092.614Pundamilia_nyererei
ENSHCOG00000012067-10086.119ENSPNAG00000019337msi110086.119Pygocentrus_nattereri
ENSHCOG00000012067-8984.244ENSRNOG00000001156Msi110084.244Rattus_norvegicus
ENSHCOG00000012067-9679.887ENSRBIG00000036889MSI110084.566Rhinopithecus_bieti
ENSHCOG00000012067-8983.891ENSRROG00000041076MSI19383.891Rhinopithecus_roxellana
ENSHCOG00000012067-8983.891ENSSBOG00000030259MSI19983.891Saimiri_boliviensis_boliviensis
ENSHCOG00000012067-7794.565ENSSHAG00000006834MSI110074.510Sarcophilus_harrisii
ENSHCOG00000012067-8992.593ENSSFOG00015005350MSI110092.593Scleropages_formosus
ENSHCOG00000012067-8994.286ENSSFOG00015014964-9690.361Scleropages_formosus
ENSHCOG00000012067-8996.633ENSSMAG00000018824MSI19796.633Scophthalmus_maximus
ENSHCOG00000012067-8992.720ENSSMAG00000009156-8091.089Scophthalmus_maximus
ENSHCOG00000012067-10087.853ENSSDUG00000022697-10087.853Seriola_dumerili
ENSHCOG00000012067-10092.635ENSSDUG00000001027MSI110092.635Seriola_dumerili
ENSHCOG00000012067-10092.635ENSSLDG00000016832MSI110092.635Seriola_lalandi_dorsalis
ENSHCOG00000012067-10082.421ENSSLDG00000018706-10082.421Seriola_lalandi_dorsalis
ENSHCOG00000012067-10081.690ENSSPUG00000015741MSI110081.690Sphenodon_punctatus
ENSHCOG00000012067-7485.864ENSSPAG00000014085-10085.864Stegastes_partitus
ENSHCOG00000012067-8196.000ENSSPAG00000015573zgc:1107968286.875Stegastes_partitus
ENSHCOG00000012067-8992.929ENSSPAG00000013098-10092.722Stegastes_partitus
ENSHCOG00000012067-10079.251ENSSSCG00000029365MSI110084.244Sus_scrofa
ENSHCOG00000012067-8985.015ENSTGUG00000009534MSI110085.015Taeniopygia_guttata
ENSHCOG00000012067-6990.625ENSTRUG00000021586-9973.267Takifugu_rubripes
ENSHCOG00000012067-8985.811ENSTRUG00000015636-7985.811Takifugu_rubripes
ENSHCOG00000012067-8095.814ENSTRUG00000016249MSI110085.375Takifugu_rubripes
ENSHCOG00000012067-9961.194ENSTNIG00000019814-9961.194Tetraodon_nigroviridis
ENSHCOG00000012067-10087.324ENSTNIG00000011469MSI110087.324Tetraodon_nigroviridis
ENSHCOG00000012067-7593.548ENSTBEG00000007182MSI110074.359Tupaia_belangeri
ENSHCOG00000012067-7790.678ENSTTRG00000005663MSI17888.538Tursiops_truncatus
ENSHCOG00000012067-7794.000ENSUAMG00000015514MSI19487.500Ursus_americanus
ENSHCOG00000012067-8981.879ENSUMAG00000006176MSI18881.879Ursus_maritimus
ENSHCOG00000012067-9083.133ENSVVUG00000020993MSI110083.587Vulpes_vulpes
ENSHCOG00000012067-10080.398ENSXETG00000012216msi110080.398Xenopus_tropicalis
ENSHCOG00000012067-8978.716ENSXCOG00000017605MSI18978.716Xiphophorus_couchianus
ENSHCOG00000012067-10086.723ENSXMAG00000018237-10086.723Xiphophorus_maculatus
ENSHCOG00000012067-10092.614ENSXMAG00000027103MSI110089.222Xiphophorus_maculatus

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