EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012268 (Gene tree)
Gene ID: 109510300
Gene Symbol: raly
Alias: zgc:103445
Full Name: RNA-binding protein Raly-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3020 bases
Position: chrKV880529.1:725447-728466
Accession: 109510300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009766	RRM_1	PF00076.22	6.6e-11	1	1
ENSHCOP00000009758	RRM_1	PF00076.22	8.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000015965	-	901	XM_019860501	ENSHCOP00000009758	270 (aa)	XP_019716060	UPI00094EAB06
ENSHCOT00000025925	-	681	-	ENSHCOP00000009766	226 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000012268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012268	raly	83	42.857	ENSHCOG00000012333	hnrnpc	75	43.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012268	raly	85	55.924	ENSG00000125970	RALY	100	76.404	Homo_sapiens
ENSHCOG00000012268	raly	95	56.466	ENSAPOG00000001026	raly	80	56.466	Acanthochromis_polyacanthus
ENSHCOG00000012268	raly	88	55.505	ENSAMEG00000009050	RALY	71	57.798	Ailuropoda_melanoleuca
ENSHCOG00000012268	raly	86	59.155	ENSACIG00000024288	raly	87	59.389	Amphilophus_citrinellus
ENSHCOG00000012268	raly	95	55.411	ENSAOCG00000009883	raly	71	55.411	Amphiprion_ocellaris
ENSHCOG00000012268	raly	95	55.844	ENSAPEG00000024106	raly	72	55.844	Amphiprion_percula
ENSHCOG00000012268	raly	90	59.633	ENSATEG00000004870	raly	72	60.185	Anabas_testudineus
ENSHCOG00000012268	raly	100	51.240	ENSAPLG00000012983	RALY	86	52.066	Anas_platyrhynchos
ENSHCOG00000012268	raly	100	52.263	ENSACAG00000008983	RALY	76	52.263	Anolis_carolinensis
ENSHCOG00000012268	raly	91	54.018	ENSANAG00000019376	RALY	75	54.911	Aotus_nancymaae
ENSHCOG00000012268	raly	94	56.466	ENSACLG00000007561	raly	75	57.202	Astatotilapia_calliptera
ENSHCOG00000012268	raly	91	54.299	ENSBTAG00000016524	RALY	73	54.751	Bos_taurus
ENSHCOG00000012268	raly	91	52.941	ENSCJAG00000009449	-	71	53.394	Callithrix_jacchus
ENSHCOG00000012268	raly	91	54.018	ENSCJAG00000018361	-	72	54.911	Callithrix_jacchus
ENSHCOG00000012268	raly	88	55.505	ENSCAFG00000007490	RALY	81	54.430	Canis_familiaris
ENSHCOG00000012268	raly	88	55.505	ENSCAFG00020005069	RALY	81	54.430	Canis_lupus_dingo
ENSHCOG00000012268	raly	88	55.505	ENSCHIG00000026609	RALY	79	54.468	Capra_hircus
ENSHCOG00000012268	raly	88	54.378	ENSTSYG00000002598	RALY	80	52.340	Carlito_syrichta
ENSHCOG00000012268	raly	91	48.869	ENSCAPG00000008110	RALY	99	49.321	Cavia_aperea
ENSHCOG00000012268	raly	91	54.018	ENSCPOG00000000309	RALY	99	53.846	Cavia_porcellus
ENSHCOG00000012268	raly	91	54.018	ENSCCAG00000024548	RALY	74	54.911	Cebus_capucinus
ENSHCOG00000012268	raly	91	54.018	ENSCATG00000031769	RALY	72	54.911	Cercocebus_atys
ENSHCOG00000012268	raly	91	54.018	ENSCLAG00000016899	RALY	76	52.697	Chinchilla_lanigera
ENSHCOG00000012268	raly	91	54.018	ENSCSAG00000012199	RALY	71	54.911	Chlorocebus_sabaeus
ENSHCOG00000012268	raly	88	50.228	ENSCHOG00000000266	RALY	96	49.778	Choloepus_hoffmanni
ENSHCOG00000012268	raly	91	54.709	ENSCPBG00000019164	RALY	83	55.605	Chrysemys_picta_bellii
ENSHCOG00000012268	raly	85	55.924	ENSCANG00000037952	RALY	75	54.911	Colobus_angolensis_palliatus
ENSHCOG00000012268	raly	91	54.299	ENSCGRG00001014652	Raly	74	53.617	Cricetulus_griseus_chok1gshd
ENSHCOG00000012268	raly	91	54.299	ENSCGRG00000011726	Raly	74	53.617	Cricetulus_griseus_crigri
ENSHCOG00000012268	raly	96	57.082	ENSDARG00000059972	raly	85	57.082	Danio_rerio
ENSHCOG00000012268	raly	88	55.963	ENSDNOG00000003227	-	80	55.804	Dasypus_novemcinctus
ENSHCOG00000012268	raly	88	53.953	ENSDNOG00000046782	-	76	53.846	Dasypus_novemcinctus
ENSHCOG00000012268	raly	91	54.299	ENSDORG00000013400	Raly	99	54.751	Dipodomys_ordii
ENSHCOG00000012268	raly	73	49.112	ENSETEG00000001919	-	59	47.778	Echinops_telfairi
ENSHCOG00000012268	raly	87	48.598	ENSETEG00000012464	-	99	49.309	Echinops_telfairi
ENSHCOG00000012268	raly	91	54.464	ENSEASG00005008501	RALY	75	55.357	Equus_asinus_asinus
ENSHCOG00000012268	raly	91	54.464	ENSECAG00000030217	-	75	55.357	Equus_caballus
ENSHCOG00000012268	raly	91	54.464	ENSECAG00000012357	RALY	75	55.357	Equus_caballus
ENSHCOG00000012268	raly	91	54.464	ENSECAG00000037642	-	75	55.357	Equus_caballus
ENSHCOG00000012268	raly	91	50.673	ENSEEUG00000005356	RALY	73	50.673	Erinaceus_europaeus
ENSHCOG00000012268	raly	96	51.600	ENSELUG00000011138	raly	85	52.400	Esox_lucius
ENSHCOG00000012268	raly	91	54.911	ENSFCAG00000025252	RALY	75	55.804	Felis_catus
ENSHCOG00000012268	raly	91	53.125	ENSFDAG00000010175	RALY	100	75.294	Fukomys_damarensis
ENSHCOG00000012268	raly	94	57.080	ENSFHEG00000018618	raly	90	56.466	Fundulus_heteroclitus
ENSHCOG00000012268	raly	86	46.698	ENSGMOG00000012589	raly	100	47.059	Gadus_morhua
ENSHCOG00000012268	raly	100	51.852	ENSGALG00000033696	RALY	90	52.675	Gallus_gallus
ENSHCOG00000012268	raly	93	55.947	ENSGACG00000003636	raly	83	54.701	Gasterosteus_aculeatus
ENSHCOG00000012268	raly	96	52.564	ENSGAGG00000016266	RALY	70	55.605	Gopherus_agassizii
ENSHCOG00000012268	raly	85	55.924	ENSGGOG00000022709	RALY	74	54.911	Gorilla_gorilla
ENSHCOG00000012268	raly	86	59.223	ENSHBUG00000021321	raly	69	59.624	Haplochromis_burtoni
ENSHCOG00000012268	raly	91	51.131	ENSHGLG00000021175	-	75	51.073	Heterocephalus_glaber_female
ENSHCOG00000012268	raly	91	54.464	ENSHGLG00000017779	-	99	53.394	Heterocephalus_glaber_female
ENSHCOG00000012268	raly	91	44.091	ENSHGLG00100000278	-	84	43.913	Heterocephalus_glaber_male
ENSHCOG00000012268	raly	91	54.464	ENSHGLG00100003933	RALY	100	61.688	Heterocephalus_glaber_male
ENSHCOG00000012268	raly	79	47.150	ENSHGLG00100003829	-	75	46.635	Heterocephalus_glaber_male
ENSHCOG00000012268	raly	91	55.804	ENSSTOG00000008810	RALY	72	56.881	Ictidomys_tridecemlineatus
ENSHCOG00000012268	raly	91	55.204	ENSJJAG00000008473	Raly	100	62.987	Jaculus_jaculus
ENSHCOG00000012268	raly	88	57.619	ENSKMAG00000015656	raly	81	58.571	Kryptolebias_marmoratus
ENSHCOG00000012268	raly	86	58.411	ENSLBEG00000022656	raly	93	57.261	Labrus_bergylta
ENSHCOG00000012268	raly	87	57.746	ENSLACG00000008596	RALY	76	57.870	Latimeria_chalumnae
ENSHCOG00000012268	raly	94	55.263	ENSLOCG00000007219	raly	82	56.828	Lepisosteus_oculatus
ENSHCOG00000012268	raly	88	55.505	ENSLAFG00000000321	RALY	70	56.422	Loxodonta_africana
ENSHCOG00000012268	raly	85	55.924	ENSMFAG00000033131	RALY	72	54.911	Macaca_fascicularis
ENSHCOG00000012268	raly	85	55.924	ENSMMUG00000018093	RALY	73	54.911	Macaca_mulatta
ENSHCOG00000012268	raly	85	55.924	ENSMNEG00000044988	RALY	73	54.911	Macaca_nemestrina
ENSHCOG00000012268	raly	85	55.924	ENSMLEG00000028900	RALY	72	54.911	Mandrillus_leucophaeus
ENSHCOG00000012268	raly	86	59.223	ENSMAMG00000012529	raly	61	59.624	Mastacembelus_armatus
ENSHCOG00000012268	raly	86	59.709	ENSMZEG00005016550	raly	64	60.680	Maylandia_zebra
ENSHCOG00000012268	raly	89	55.505	ENSMGAG00000002214	RALY	72	56.422	Meleagris_gallopavo
ENSHCOG00000012268	raly	91	54.299	ENSMAUG00000005739	Raly	99	54.751	Mesocricetus_auratus
ENSHCOG00000012268	raly	91	55.357	ENSMICG00000039074	RALY	75	56.250	Microcebus_murinus
ENSHCOG00000012268	raly	91	54.299	ENSMOCG00000009450	Raly	74	53.165	Microtus_ochrogaster
ENSHCOG00000012268	raly	91	57.143	ENSMMOG00000013788	raly	84	59.459	Mola_mola
ENSHCOG00000012268	raly	87	54.299	ENSMODG00000002819	-	85	52.459	Monodelphis_domestica
ENSHCOG00000012268	raly	94	56.710	ENSMALG00000007071	raly	61	56.118	Monopterus_albus
ENSHCOG00000012268	raly	91	54.425	MGP_CAROLIEiJ_G0024519	Raly	100	62.338	Mus_caroli
ENSHCOG00000012268	raly	91	54.299	ENSMUSG00000027593	Raly	100	62.338	Mus_musculus
ENSHCOG00000012268	raly	91	54.299	MGP_PahariEiJ_G0025963	Raly	100	62.338	Mus_pahari
ENSHCOG00000012268	raly	91	54.299	MGP_SPRETEiJ_G0025441	Raly	100	62.338	Mus_spretus
ENSHCOG00000012268	raly	88	55.505	ENSMPUG00000017820	RALY	81	54.008	Mustela_putorius_furo
ENSHCOG00000012268	raly	88	55.505	ENSMLUG00000005330	-	76	55.804	Myotis_lucifugus
ENSHCOG00000012268	raly	91	50.685	ENSMLUG00000027895	-	81	49.569	Myotis_lucifugus
ENSHCOG00000012268	raly	91	54.299	ENSNGAG00000001263	Raly	99	54.751	Nannospalax_galili
ENSHCOG00000012268	raly	86	59.709	ENSNBRG00000014761	raly	69	60.094	Neolamprologus_brichardi
ENSHCOG00000012268	raly	80	40.083	ENSNLEG00000010031	-	72	45.745	Nomascus_leucogenys
ENSHCOG00000012268	raly	91	54.911	ENSOPRG00000008423	RALY	76	54.701	Ochotona_princeps
ENSHCOG00000012268	raly	77	42.553	ENSODEG00000011160	-	78	41.706	Octodon_degus
ENSHCOG00000012268	raly	91	53.846	ENSODEG00000008369	-	77	53.043	Octodon_degus
ENSHCOG00000012268	raly	86	47.143	ENSODEG00000012831	-	100	48.372	Octodon_degus
ENSHCOG00000012268	raly	94	56.466	ENSONIG00000004416	raly	84	57.202	Oreochromis_niloticus
ENSHCOG00000012268	raly	88	56.621	ENSOCUG00000000477	RALY	61	56.250	Oryctolagus_cuniculus
ENSHCOG00000012268	raly	91	57.143	ENSOGAG00000032337	RALY	72	58.036	Otolemur_garnettii
ENSHCOG00000012268	raly	88	55.505	ENSOARG00000008957	RALY	79	54.468	Ovis_aries
ENSHCOG00000012268	raly	85	55.924	ENSPPAG00000034951	RALY	73	54.911	Pan_paniscus
ENSHCOG00000012268	raly	91	54.911	ENSPPRG00000014593	RALY	75	55.804	Panthera_pardus
ENSHCOG00000012268	raly	91	54.911	ENSPTIG00000021910	RALY	75	55.804	Panthera_tigris_altaica
ENSHCOG00000012268	raly	85	55.924	ENSPTRG00000013410	RALY	73	54.911	Pan_troglodytes
ENSHCOG00000012268	raly	85	55.924	ENSPANG00000018093	RALY	72	54.911	Papio_anubis
ENSHCOG00000012268	raly	94	57.456	ENSPKIG00000004894	raly	82	57.018	Paramormyrops_kingsleyae
ENSHCOG00000012268	raly	91	54.299	ENSPEMG00000021466	Raly	73	54.751	Peromyscus_maniculatus_bairdii
ENSHCOG00000012268	raly	96	54.043	ENSPCIG00000011153	-	84	54.043	Phascolarctos_cinereus
ENSHCOG00000012268	raly	85	55.924	ENSPPYG00000010932	RALY	74	54.911	Pongo_abelii
ENSHCOG00000012268	raly	91	50.000	ENSPCAG00000016867	RALY	75	50.446	Procavia_capensis
ENSHCOG00000012268	raly	91	55.804	ENSPCOG00000016363	RALY	75	56.250	Propithecus_coquereli
ENSHCOG00000012268	raly	88	55.046	ENSPVAG00000015827	RALY	76	55.357	Pteropus_vampyrus
ENSHCOG00000012268	raly	86	62.687	ENSPNYG00000011247	raly	63	62.687	Pundamilia_nyererei
ENSHCOG00000012268	raly	91	56.109	ENSPNAG00000011812	raly	78	57.407	Pygocentrus_nattereri
ENSHCOG00000012268	raly	91	54.299	ENSRNOG00000017405	Raly	76	52.720	Rattus_norvegicus
ENSHCOG00000012268	raly	85	55.924	ENSRBIG00000030203	RALY	71	54.911	Rhinopithecus_bieti
ENSHCOG00000012268	raly	91	54.018	ENSRROG00000038781	RALY	71	54.911	Rhinopithecus_roxellana
ENSHCOG00000012268	raly	91	54.018	ENSSBOG00000001418	RALY	73	54.911	Saimiri_boliviensis_boliviensis
ENSHCOG00000012268	raly	90	53.917	ENSSHAG00000016830	RALY	70	53.917	Sarcophilus_harrisii
ENSHCOG00000012268	raly	94	55.459	ENSSFOG00015012304	raly	88	54.894	Scleropages_formosus
ENSHCOG00000012268	raly	96	56.502	ENSSMAG00000001107	raly	80	54.622	Scophthalmus_maximus
ENSHCOG00000012268	raly	95	54.701	ENSSDUG00000002411	raly	79	56.652	Seriola_dumerili
ENSHCOG00000012268	raly	96	55.603	ENSSLDG00000017872	raly	79	56.466	Seriola_lalandi_dorsalis
ENSHCOG00000012268	raly	85	46.919	ENSSARG00000002763	-	71	47.248	Sorex_araneus
ENSHCOG00000012268	raly	100	51.440	ENSSPUG00000006251	RALY	89	52.263	Sphenodon_punctatus
ENSHCOG00000012268	raly	95	49.091	ENSSPAG00000022480	-	88	50.909	Stegastes_partitus
ENSHCOG00000012268	raly	91	54.911	ENSSSCG00000007275	RALY	69	55.804	Sus_scrofa
ENSHCOG00000012268	raly	87	55.399	ENSTGUG00000003715	RALY	100	56.279	Taeniopygia_guttata
ENSHCOG00000012268	raly	85	48.325	ENSTBEG00000009812	RALY	76	45.570	Tupaia_belangeri
ENSHCOG00000012268	raly	86	55.140	ENSTTRG00000006590	RALY	73	55.046	Tursiops_truncatus
ENSHCOG00000012268	raly	88	55.505	ENSUAMG00000006993	RALY	82	54.430	Ursus_americanus
ENSHCOG00000012268	raly	88	55.505	ENSUMAG00000024106	RALY	81	54.430	Ursus_maritimus
ENSHCOG00000012268	raly	72	57.485	ENSVPAG00000000373	RALY	56	58.084	Vicugna_pacos
ENSHCOG00000012268	raly	88	55.505	ENSVVUG00000004546	RALY	81	54.430	Vulpes_vulpes
ENSHCOG00000012268	raly	92	51.261	ENSXETG00000019514	raly	82	51.261	Xenopus_tropicalis