EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000012329 (Gene tree)
Gene ID: 109516788
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4136 bases
Position: chrKV879959.1:618447-622582
Accession: 109516788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009827	RNase_H	PF00075.24	1.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000025950	-	1516	XM_019871575	ENSHCOP00000009827	304 (aa)	XP_019727134	UPI00094EBBA9

Gene Model

Click here to download ENSHCOG00000012329's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012329	rnaseh1	89	52.768	ENSG00000171865	RNASEH1	91	52.768	Homo_sapiens
ENSHCOG00000012329	rnaseh1	99	72.039	ENSAPOG00000000412	rnaseh1	98	72.039	Acanthochromis_polyacanthus
ENSHCOG00000012329	rnaseh1	92	52.837	ENSAMEG00000018433	RNASEH1	99	50.498	Ailuropoda_melanoleuca
ENSHCOG00000012329	rnaseh1	100	72.368	ENSACIG00000014666	rnaseh1	98	72.368	Amphilophus_citrinellus
ENSHCOG00000012329	rnaseh1	100	73.290	ENSAOCG00000015210	rnaseh1	99	73.290	Amphiprion_ocellaris
ENSHCOG00000012329	rnaseh1	100	73.290	ENSAPEG00000014104	rnaseh1	99	73.290	Amphiprion_percula
ENSHCOG00000012329	rnaseh1	99	72.368	ENSATEG00000000598	rnaseh1	97	74.286	Anabas_testudineus
ENSHCOG00000012329	rnaseh1	85	56.322	ENSAPLG00000001961	RNASEH1	100	56.322	Anas_platyrhynchos
ENSHCOG00000012329	rnaseh1	89	50.836	ENSACAG00000016857	rnaseh1	92	50.836	Anolis_carolinensis
ENSHCOG00000012329	rnaseh1	99	50.333	ENSANAG00000024055	RNASEH1	99	50.333	Aotus_nancymaae
ENSHCOG00000012329	rnaseh1	100	71.336	ENSACLG00000006741	rnaseh1	98	71.987	Astatotilapia_calliptera
ENSHCOG00000012329	rnaseh1	98	53.356	ENSAMXG00000042940	rnaseh1	97	57.565	Astyanax_mexicanus
ENSHCOG00000012329	rnaseh1	88	56.667	ENSBTAG00000016235	RNASEH1	91	55.755	Bos_taurus
ENSHCOG00000012329	rnaseh1	89	35.740	WBGene00004382	rnh-1.0	97	36.029	Caenorhabditis_elegans
ENSHCOG00000012329	rnaseh1	99	49.671	ENSCJAG00000035450	RNASEH1	99	49.671	Callithrix_jacchus
ENSHCOG00000012329	rnaseh1	99	51.974	ENSCAFG00000003259	RNASEH1	99	50.495	Canis_familiaris
ENSHCOG00000012329	rnaseh1	50	65.359	ENSCAFG00020004994	RNASEH1	99	65.359	Canis_lupus_dingo
ENSHCOG00000012329	rnaseh1	97	52.145	ENSCHIG00000022264	-	98	52.145	Capra_hircus
ENSHCOG00000012329	rnaseh1	81	42.205	ENSCHIG00000022230	-	98	43.089	Capra_hircus
ENSHCOG00000012329	rnaseh1	96	52.381	ENSTSYG00000012926	RNASEH1	94	51.864	Carlito_syrichta
ENSHCOG00000012329	rnaseh1	82	54.331	ENSCAPG00000004813	RNASEH1	98	54.331	Cavia_aperea
ENSHCOG00000012329	rnaseh1	88	54.244	ENSCPOG00000022278	Rnaseh1	86	54.244	Cavia_porcellus
ENSHCOG00000012329	rnaseh1	99	50.164	ENSCCAG00000038017	RNASEH1	99	49.191	Cebus_capucinus
ENSHCOG00000012329	rnaseh1	89	52.399	ENSCATG00000016515	-	91	52.536	Cercocebus_atys
ENSHCOG00000012329	rnaseh1	96	47.945	ENSCATG00000016818	-	95	46.382	Cercocebus_atys
ENSHCOG00000012329	rnaseh1	89	54.244	ENSCLAG00000002440	RNASEH1	90	53.818	Chinchilla_lanigera
ENSHCOG00000012329	rnaseh1	93	51.590	ENSCSAG00000006943	RNASEH1	93	51.590	Chlorocebus_sabaeus
ENSHCOG00000012329	rnaseh1	56	64.327	ENSCHOG00000008547	RNASEH1	84	64.327	Choloepus_hoffmanni
ENSHCOG00000012329	rnaseh1	91	54.386	ENSCPBG00000021620	RNASEH1	99	55.147	Chrysemys_picta_bellii
ENSHCOG00000012329	rnaseh1	88	36.429	ENSCING00000014054	-	92	36.429	Ciona_intestinalis
ENSHCOG00000012329	rnaseh1	75	38.034	ENSCSAVG00000000009	-	96	38.034	Ciona_savignyi
ENSHCOG00000012329	rnaseh1	89	53.309	ENSCANG00000037763	RNASEH1	91	53.309	Colobus_angolensis_palliatus
ENSHCOG00000012329	rnaseh1	96	50.508	ENSCGRG00001008950	Rnaseh1	95	50.836	Cricetulus_griseus_chok1gshd
ENSHCOG00000012329	rnaseh1	96	50.508	ENSCGRG00000006029	Rnaseh1	95	50.836	Cricetulus_griseus_crigri
ENSHCOG00000012329	rnaseh1	98	66.890	ENSCSEG00000005741	rnaseh1	96	67.870	Cynoglossus_semilaevis
ENSHCOG00000012329	rnaseh1	95	69.625	ENSCVAG00000018717	rnaseh1	95	69.283	Cyprinodon_variegatus
ENSHCOG00000012329	rnaseh1	89	65.468	ENSDARG00000042571	rnaseh1	98	64.493	Danio_rerio
ENSHCOG00000012329	rnaseh1	89	55.147	ENSDNOG00000016056	RNASEH1	90	54.412	Dasypus_novemcinctus
ENSHCOG00000012329	rnaseh1	97	51.163	ENSDORG00000000704	Rnaseh1	98	50.166	Dipodomys_ordii
ENSHCOG00000012329	rnaseh1	89	39.262	FBgn0023171	rnh1	94	39.116	Drosophila_melanogaster
ENSHCOG00000012329	rnaseh1	99	48.505	ENSETEG00000012674	RNASEH1	99	48.505	Echinops_telfairi
ENSHCOG00000012329	rnaseh1	88	45.675	ENSEBUG00000008898	rnaseh1	98	45.675	Eptatretus_burgeri
ENSHCOG00000012329	rnaseh1	88	44.485	ENSEBUG00000006116	rnaseh1	78	44.649	Eptatretus_burgeri
ENSHCOG00000012329	rnaseh1	99	52.787	ENSEASG00005022200	RNASEH1	99	52.787	Equus_asinus_asinus
ENSHCOG00000012329	rnaseh1	99	52.787	ENSECAG00000020695	RNASEH1	99	52.787	Equus_caballus
ENSHCOG00000012329	rnaseh1	98	66.776	ENSELUG00000010112	rnaseh1	99	65.789	Esox_lucius
ENSHCOG00000012329	rnaseh1	99	51.125	ENSFCAG00000025832	RNASEH1	99	51.125	Felis_catus
ENSHCOG00000012329	rnaseh1	90	57.244	ENSFALG00000002069	RNASEH1	94	57.586	Ficedula_albicollis
ENSHCOG00000012329	rnaseh1	99	49.669	ENSFDAG00000002035	RNASEH1	89	49.338	Fukomys_damarensis
ENSHCOG00000012329	rnaseh1	98	66.221	ENSGMOG00000013818	rnaseh1	99	66.221	Gadus_morhua
ENSHCOG00000012329	rnaseh1	90	56.115	ENSGALG00000016389	RNASEH1	94	56.115	Gallus_gallus
ENSHCOG00000012329	rnaseh1	97	64.120	ENSGAFG00000001776	rnaseh1	99	63.123	Gambusia_affinis
ENSHCOG00000012329	rnaseh1	98	73.422	ENSGACG00000011935	rnaseh1	98	73.754	Gasterosteus_aculeatus
ENSHCOG00000012329	rnaseh1	96	53.746	ENSGAGG00000009150	RNASEH1	70	52.769	Gopherus_agassizii
ENSHCOG00000012329	rnaseh1	89	52.768	ENSGGOG00000034822	RNASEH1	91	52.768	Gorilla_gorilla
ENSHCOG00000012329	rnaseh1	100	71.010	ENSHBUG00000004666	rnaseh1	98	71.661	Haplochromis_burtoni
ENSHCOG00000012329	rnaseh1	99	47.573	ENSHGLG00000002585	Rnaseh1	93	47.573	Heterocephalus_glaber_female
ENSHCOG00000012329	rnaseh1	99	47.573	ENSHGLG00100005105	Rnaseh1	93	47.573	Heterocephalus_glaber_male
ENSHCOG00000012329	rnaseh1	98	58.054	ENSIPUG00000023060	rnaseh1	98	59.926	Ictalurus_punctatus
ENSHCOG00000012329	rnaseh1	89	54.874	ENSSTOG00000012774	RNASEH1	95	52.234	Ictidomys_tridecemlineatus
ENSHCOG00000012329	rnaseh1	96	48.797	ENSJJAG00000021481	-	94	48.123	Jaculus_jaculus
ENSHCOG00000012329	rnaseh1	87	50.000	ENSJJAG00000020238	Rnaseh1	94	49.248	Jaculus_jaculus
ENSHCOG00000012329	rnaseh1	87	44.487	ENSJJAG00000008994	-	89	43.396	Jaculus_jaculus
ENSHCOG00000012329	rnaseh1	98	70.134	ENSKMAG00000001373	rnaseh1	97	69.128	Kryptolebias_marmoratus
ENSHCOG00000012329	rnaseh1	98	69.900	ENSLBEG00000004480	rnaseh1	99	73.381	Labrus_bergylta
ENSHCOG00000012329	rnaseh1	91	56.842	ENSLACG00000007100	RNASEH1	91	56.491	Latimeria_chalumnae
ENSHCOG00000012329	rnaseh1	90	61.232	ENSLOCG00000017212	rnaseh1	99	61.232	Lepisosteus_oculatus
ENSHCOG00000012329	rnaseh1	99	50.333	ENSLAFG00000015091	RNASEH1	99	50.331	Loxodonta_africana
ENSHCOG00000012329	rnaseh1	88	53.731	ENSMFAG00000000063	-	89	53.731	Macaca_fascicularis
ENSHCOG00000012329	rnaseh1	96	48.495	ENSMFAG00000002323	-	95	48.639	Macaca_fascicularis
ENSHCOG00000012329	rnaseh1	96	48.299	ENSMMUG00000019280	-	95	48.980	Macaca_mulatta
ENSHCOG00000012329	rnaseh1	96	48.980	ENSMNEG00000029676	-	95	48.173	Macaca_nemestrina
ENSHCOG00000012329	rnaseh1	88	53.731	ENSMNEG00000040183	-	89	53.731	Macaca_nemestrina
ENSHCOG00000012329	rnaseh1	84	52.362	ENSMLEG00000039352	-	99	52.362	Mandrillus_leucophaeus
ENSHCOG00000012329	rnaseh1	95	49.664	ENSMLEG00000028662	-	96	48.814	Mandrillus_leucophaeus
ENSHCOG00000012329	rnaseh1	99	70.395	ENSMAMG00000019725	rnaseh1	96	72.857	Mastacembelus_armatus
ENSHCOG00000012329	rnaseh1	100	71.336	ENSMZEG00005013006	rnaseh1	98	71.987	Maylandia_zebra
ENSHCOG00000012329	rnaseh1	80	56.250	ENSMGAG00000013979	RNASEH1	99	55.102	Meleagris_gallopavo
ENSHCOG00000012329	rnaseh1	97	50.505	ENSMAUG00000014957	Rnaseh1	96	50.336	Mesocricetus_auratus
ENSHCOG00000012329	rnaseh1	99	52.273	ENSMICG00000033156	RNASEH1	98	51.456	Microcebus_murinus
ENSHCOG00000012329	rnaseh1	99	51.299	ENSMOCG00000015522	Rnaseh1	99	51.299	Microtus_ochrogaster
ENSHCOG00000012329	rnaseh1	97	70.270	ENSMMOG00000015902	rnaseh1	96	69.257	Mola_mola
ENSHCOG00000012329	rnaseh1	79	50.000	ENSMODG00000028814	-	92	50.400	Monodelphis_domestica
ENSHCOG00000012329	rnaseh1	93	52.921	ENSMODG00000014491	-	94	53.497	Monodelphis_domestica
ENSHCOG00000012329	rnaseh1	99	72.039	ENSMALG00000010565	rnaseh1	98	71.711	Monopterus_albus
ENSHCOG00000012329	rnaseh1	99	52.303	MGP_CAROLIEiJ_G0017660	Rnaseh1	99	52.303	Mus_caroli
ENSHCOG00000012329	rnaseh1	99	52.632	ENSMUSG00000020630	Rnaseh1	99	52.632	Mus_musculus
ENSHCOG00000012329	rnaseh1	99	50.327	MGP_PahariEiJ_G0029418	Rnaseh1	99	51.974	Mus_pahari
ENSHCOG00000012329	rnaseh1	99	52.961	MGP_SPRETEiJ_G0018502	Rnaseh1	99	51.948	Mus_spretus
ENSHCOG00000012329	rnaseh1	52	64.968	ENSMPUG00000012984	RNASEH1	76	64.968	Mustela_putorius_furo
ENSHCOG00000012329	rnaseh1	89	54.710	ENSNGAG00000015966	Rnaseh1	85	54.513	Nannospalax_galili
ENSHCOG00000012329	rnaseh1	100	72.313	ENSNBRG00000008739	rnaseh1	98	72.313	Neolamprologus_brichardi
ENSHCOG00000012329	rnaseh1	96	44.595	ENSNLEG00000015400	RNASEH1	94	44.257	Nomascus_leucogenys
ENSHCOG00000012329	rnaseh1	81	47.773	ENSNLEG00000000059	-	88	47.773	Nomascus_leucogenys
ENSHCOG00000012329	rnaseh1	88	37.175	ENSMEUG00000003610	-	90	36.431	Notamacropus_eugenii
ENSHCOG00000012329	rnaseh1	88	54.307	ENSOPRG00000005072	RNASEH1	89	52.985	Ochotona_princeps
ENSHCOG00000012329	rnaseh1	95	54.027	ENSODEG00000000235	Rnaseh1	94	54.027	Octodon_degus
ENSHCOG00000012329	rnaseh1	91	75.000	ENSONIG00000018697	rnaseh1	100	74.643	Oreochromis_niloticus
ENSHCOG00000012329	rnaseh1	89	52.015	ENSOCUG00000006117	RNASEH1	91	51.648	Oryctolagus_cuniculus
ENSHCOG00000012329	rnaseh1	91	70.863	ENSORLG00000018127	rnaseh1	97	70.863	Oryzias_latipes
ENSHCOG00000012329	rnaseh1	99	68.874	ENSORLG00020013660	rnaseh1	98	68.874	Oryzias_latipes_hni
ENSHCOG00000012329	rnaseh1	99	68.874	ENSORLG00015011338	rnaseh1	98	68.874	Oryzias_latipes_hsok
ENSHCOG00000012329	rnaseh1	90	69.203	ENSOMEG00000004710	rnaseh1	99	68.478	Oryzias_melastigma
ENSHCOG00000012329	rnaseh1	98	51.645	ENSOGAG00000017176	RNASEH1	99	51.645	Otolemur_garnettii
ENSHCOG00000012329	rnaseh1	97	46.688	ENSOARG00000005386	RNASEH1	98	46.688	Ovis_aries
ENSHCOG00000012329	rnaseh1	89	52.768	ENSPPAG00000034221	RNASEH1	91	52.768	Pan_paniscus
ENSHCOG00000012329	rnaseh1	99	50.804	ENSPPRG00000015513	RNASEH1	99	50.804	Panthera_pardus
ENSHCOG00000012329	rnaseh1	83	53.788	ENSPTIG00000019034	RNASEH1	84	53.788	Panthera_tigris_altaica
ENSHCOG00000012329	rnaseh1	89	52.768	ENSPTRG00000011614	RNASEH1	91	52.768	Pan_troglodytes
ENSHCOG00000012329	rnaseh1	91	44.948	ENSPTRG00000043403	-	99	44.444	Pan_troglodytes
ENSHCOG00000012329	rnaseh1	96	46.959	ENSPANG00000018246	-	94	46.622	Papio_anubis
ENSHCOG00000012329	rnaseh1	89	52.399	ENSPANG00000000443	RNASEH1	99	52.549	Papio_anubis
ENSHCOG00000012329	rnaseh1	90	59.717	ENSPKIG00000003146	rnaseh1	99	59.364	Paramormyrops_kingsleyae
ENSHCOG00000012329	rnaseh1	88	56.250	ENSPSIG00000002937	RNASEH1	99	54.982	Pelodiscus_sinensis
ENSHCOG00000012329	rnaseh1	98	60.726	ENSPMGG00000017463	rnaseh1	99	60.811	Periophthalmus_magnuspinnatus
ENSHCOG00000012329	rnaseh1	96	50.171	ENSPEMG00000022465	-	95	51.839	Peromyscus_maniculatus_bairdii
ENSHCOG00000012329	rnaseh1	99	49.836	ENSPCIG00000023334	-	99	49.175	Phascolarctos_cinereus
ENSHCOG00000012329	rnaseh1	53	36.810	ENSPCIG00000026047	-	92	36.810	Phascolarctos_cinereus
ENSHCOG00000012329	rnaseh1	97	64.238	ENSPFOG00000002841	rnaseh1	100	63.245	Poecilia_formosa
ENSHCOG00000012329	rnaseh1	65	56.311	ENSPLAG00000021349	-	77	55.122	Poecilia_latipinna
ENSHCOG00000012329	rnaseh1	95	65.188	ENSPMEG00000016826	rnaseh1	97	64.164	Poecilia_mexicana
ENSHCOG00000012329	rnaseh1	97	63.636	ENSPREG00000012197	rnaseh1	100	62.662	Poecilia_reticulata
ENSHCOG00000012329	rnaseh1	81	48.387	ENSPPYG00000008067	-	90	48.387	Pongo_abelii
ENSHCOG00000012329	rnaseh1	97	40.816	ENSPPYG00000025873	RNASEH1	95	40.803	Pongo_abelii
ENSHCOG00000012329	rnaseh1	97	49.664	ENSPCAG00000002500	RNASEH1	97	49.662	Procavia_capensis
ENSHCOG00000012329	rnaseh1	99	46.865	ENSPCOG00000019444	RNASEH1	98	46.006	Propithecus_coquereli
ENSHCOG00000012329	rnaseh1	97	49.834	ENSPVAG00000002070	RNASEH1	98	49.667	Pteropus_vampyrus
ENSHCOG00000012329	rnaseh1	100	71.010	ENSPNYG00000001292	rnaseh1	98	71.661	Pundamilia_nyererei
ENSHCOG00000012329	rnaseh1	98	62.667	ENSPNAG00000022344	rnaseh1	99	62.333	Pygocentrus_nattereri
ENSHCOG00000012329	rnaseh1	99	51.603	ENSRNOG00000008584	Rnaseh1	99	53.094	Rattus_norvegicus
ENSHCOG00000012329	rnaseh1	89	53.309	ENSRBIG00000034222	RNASEH1	90	53.309	Rhinopithecus_bieti
ENSHCOG00000012329	rnaseh1	89	53.309	ENSRROG00000041761	RNASEH1	90	53.309	Rhinopithecus_roxellana
ENSHCOG00000012329	rnaseh1	90	52.000	YMR234W	-	91	52.000	Saccharomyces_cerevisiae
ENSHCOG00000012329	rnaseh1	89	52.364	ENSSBOG00000025411	RNASEH1	91	52.364	Saimiri_boliviensis_boliviensis
ENSHCOG00000012329	rnaseh1	99	51.974	ENSSHAG00000013051	RNASEH1	98	50.820	Sarcophilus_harrisii
ENSHCOG00000012329	rnaseh1	98	57.143	ENSSFOG00015002709	rnaseh1	99	57.994	Scleropages_formosus
ENSHCOG00000012329	rnaseh1	98	71.382	ENSSMAG00000007586	rnaseh1	96	71.382	Scophthalmus_maximus
ENSHCOG00000012329	rnaseh1	94	74.306	ENSSDUG00000008217	rnaseh1	95	74.638	Seriola_dumerili
ENSHCOG00000012329	rnaseh1	83	73.016	ENSSLDG00000000442	rnaseh1	94	71.765	Seriola_lalandi_dorsalis
ENSHCOG00000012329	rnaseh1	98	52.104	ENSSPUG00000006644	RNASEH1	99	51.623	Sphenodon_punctatus
ENSHCOG00000012329	rnaseh1	98	72.093	ENSSPAG00000009353	rnaseh1	96	72.093	Stegastes_partitus
ENSHCOG00000012329	rnaseh1	88	53.731	ENSSSCG00000025305	RNASEH1	98	51.667	Sus_scrofa
ENSHCOG00000012329	rnaseh1	90	56.098	ENSTGUG00000012980	RNASEH1	94	56.491	Taeniopygia_guttata
ENSHCOG00000012329	rnaseh1	93	70.383	ENSTRUG00000015774	rnaseh1	97	69.314	Takifugu_rubripes
ENSHCOG00000012329	rnaseh1	90	77.372	ENSTNIG00000010715	rnaseh1	97	77.372	Tetraodon_nigroviridis
ENSHCOG00000012329	rnaseh1	97	50.168	ENSTTRG00000001615	RNASEH1	98	49.508	Tursiops_truncatus
ENSHCOG00000012329	rnaseh1	50	65.359	ENSUAMG00000018254	RNASEH1	79	65.359	Ursus_americanus
ENSHCOG00000012329	rnaseh1	69	51.802	ENSUMAG00000003941	RNASEH1	66	51.802	Ursus_maritimus
ENSHCOG00000012329	rnaseh1	97	45.302	ENSVPAG00000011589	RNASEH1	98	45.033	Vicugna_pacos
ENSHCOG00000012329	rnaseh1	99	50.831	ENSVVUG00000008633	RNASEH1	89	51.163	Vulpes_vulpes
ENSHCOG00000012329	rnaseh1	98	51.815	ENSXETG00000001212	rnaseh1	99	54.000	Xenopus_tropicalis
ENSHCOG00000012329	rnaseh1	77	48.235	ENSXETG00000030371	-	99	48.235	Xenopus_tropicalis
ENSHCOG00000012329	rnaseh1	96	65.217	ENSXMAG00000002357	rnaseh1	99	64.214	Xiphophorus_maculatus