EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012333 (Gene tree)
Gene ID: 109529521
Gene Symbol: hnrnpc
Alias: fb57h12|fi16b11|wu:fb57h12|wu:fi16b11|zgc:55701
Full Name: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11456 bases
Position: chrKV880367.1:755566-767021
Accession: 109529521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023632	RRM_1	PF00076.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016061	-	1559	XM_019892940	ENSHCOP00000023632	306 (aa)	XP_019748499	-

Gene Model

Click here to download ENSHCOG00000012333's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012333	hnrnpc	75	43.043	ENSHCOG00000012268	raly	83	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012333	hnrnpc	76	54.468	ENSG00000184672	RALYL	92	76.923	Homo_sapiens
ENSHCOG00000012333	hnrnpc	86	80.000	ENSAPOG00000006963	hnrnpc	83	78.967	Acanthochromis_polyacanthus
ENSHCOG00000012333	hnrnpc	87	86.891	ENSACIG00000016568	-	81	89.035	Amphilophus_citrinellus
ENSHCOG00000012333	hnrnpc	87	80.443	ENSACIG00000000270	-	82	84.348	Amphilophus_citrinellus
ENSHCOG00000012333	hnrnpc	91	85.199	ENSAOCG00000021616	-	81	85.294	Amphiprion_ocellaris
ENSHCOG00000012333	hnrnpc	86	79.623	ENSAOCG00000003896	-	83	78.967	Amphiprion_ocellaris
ENSHCOG00000012333	hnrnpc	86	79.623	ENSAPEG00000001489	-	83	78.967	Amphiprion_percula
ENSHCOG00000012333	hnrnpc	91	85.560	ENSAPEG00000019962	-	84	85.294	Amphiprion_percula
ENSHCOG00000012333	hnrnpc	87	74.815	ENSATEG00000011734	-	84	78.868	Anabas_testudineus
ENSHCOG00000012333	hnrnpc	91	86.022	ENSATEG00000018006	-	79	89.474	Anabas_testudineus
ENSHCOG00000012333	hnrnpc	76	52.209	ENSAPLG00000015574	RALYL	80	51.837	Anas_platyrhynchos
ENSHCOG00000012333	hnrnpc	76	52.209	ENSACAG00000028464	RALYL	79	52.653	Anolis_carolinensis
ENSHCOG00000012333	hnrnpc	76	54.468	ENSANAG00000023383	RALYL	78	53.617	Aotus_nancymaae
ENSHCOG00000012333	hnrnpc	88	73.801	ENSACLG00000013636	-	86	76.753	Astatotilapia_calliptera
ENSHCOG00000012333	hnrnpc	91	85.663	ENSACLG00000005707	-	88	86.131	Astatotilapia_calliptera
ENSHCOG00000012333	hnrnpc	86	75.094	ENSACLG00000000995	-	84	76.753	Astatotilapia_calliptera
ENSHCOG00000012333	hnrnpc	73	71.622	ENSAMXG00000042946	hnrnpc	97	75.369	Astyanax_mexicanus
ENSHCOG00000012333	hnrnpc	92	72.085	ENSAMXG00000034915	zgc:55733	88	72.901	Astyanax_mexicanus
ENSHCOG00000012333	hnrnpc	76	52.743	ENSCJAG00000000402	RALYL	78	53.617	Callithrix_jacchus
ENSHCOG00000012333	hnrnpc	76	51.210	ENSCPOG00000012314	RALYL	79	52.245	Cavia_porcellus
ENSHCOG00000012333	hnrnpc	76	54.468	ENSCCAG00000025003	RALYL	76	76.923	Cebus_capucinus
ENSHCOG00000012333	hnrnpc	76	54.468	ENSCATG00000042145	RALYL	78	53.617	Cercocebus_atys
ENSHCOG00000012333	hnrnpc	76	51.210	ENSCLAG00000005228	RALYL	79	52.245	Chinchilla_lanigera
ENSHCOG00000012333	hnrnpc	73	51.899	ENSCHOG00000013228	RALYL	75	50.000	Choloepus_hoffmanni
ENSHCOG00000012333	hnrnpc	76	54.468	ENSCANG00000039144	RALYL	78	53.617	Colobus_angolensis_palliatus
ENSHCOG00000012333	hnrnpc	76	51.004	ENSCGRG00001009241	Ralyl	79	52.245	Cricetulus_griseus_chok1gshd
ENSHCOG00000012333	hnrnpc	86	84.791	ENSCSEG00000021349	-	79	84.411	Cynoglossus_semilaevis
ENSHCOG00000012333	hnrnpc	74	70.870	ENSCSEG00000019769	-	73	73.043	Cynoglossus_semilaevis
ENSHCOG00000012333	hnrnpc	96	60.738	ENSCVAG00000002797	-	84	62.642	Cyprinodon_variegatus
ENSHCOG00000012333	hnrnpc	91	81.655	ENSCVAG00000016981	-	80	81.685	Cyprinodon_variegatus
ENSHCOG00000012333	hnrnpc	84	75.290	ENSDARG00000053810	hnrnpc	81	74.725	Danio_rerio
ENSHCOG00000012333	hnrnpc	92	73.214	ENSDARG00000103845	zgc:55733	90	75.290	Danio_rerio
ENSHCOG00000012333	hnrnpc	76	51.807	ENSDORG00000003721	Ralyl	79	52.653	Dipodomys_ordii
ENSHCOG00000012333	hnrnpc	51	57.143	ENSETEG00000014028	RALYL	81	60.000	Echinops_telfairi
ENSHCOG00000012333	hnrnpc	93	40.909	ENSEBUG00000006049	RALYL	92	39.510	Eptatretus_burgeri
ENSHCOG00000012333	hnrnpc	93	40.909	ENSEBUG00000012363	hnrnpc	78	42.164	Eptatretus_burgeri
ENSHCOG00000012333	hnrnpc	75	51.639	ENSEEUG00000007202	RALYL	78	52.917	Erinaceus_europaeus
ENSHCOG00000012333	hnrnpc	97	71.947	ENSELUG00000004132	-	89	74.729	Esox_lucius
ENSHCOG00000012333	hnrnpc	97	74.426	ENSELUG00000007714	-	93	78.182	Esox_lucius
ENSHCOG00000012333	hnrnpc	73	56.951	ENSFALG00000008647	RALYL	96	55.605	Ficedula_albicollis
ENSHCOG00000012333	hnrnpc	95	70.508	ENSFHEG00000003605	-	85	72.426	Fundulus_heteroclitus
ENSHCOG00000012333	hnrnpc	87	78.723	ENSFHEG00000007278	-	81	78.700	Fundulus_heteroclitus
ENSHCOG00000012333	hnrnpc	76	53.975	ENSGALG00000036938	RALYL	80	51.145	Gallus_gallus
ENSHCOG00000012333	hnrnpc	90	81.818	ENSGAFG00000020992	-	84	81.852	Gambusia_affinis
ENSHCOG00000012333	hnrnpc	95	70.508	ENSGAFG00000020486	-	81	77.293	Gambusia_affinis
ENSHCOG00000012333	hnrnpc	75	71.053	ENSGACG00000018932	-	88	64.935	Gasterosteus_aculeatus
ENSHCOG00000012333	hnrnpc	88	83.704	ENSGACG00000017772	-	96	84.733	Gasterosteus_aculeatus
ENSHCOG00000012333	hnrnpc	76	54.468	ENSGGOG00000000841	RALYL	78	53.617	Gorilla_gorilla
ENSHCOG00000012333	hnrnpc	91	86.022	ENSHBUG00000010527	-	82	86.496	Haplochromis_burtoni
ENSHCOG00000012333	hnrnpc	86	75.472	ENSHBUG00000018342	-	84	77.122	Haplochromis_burtoni
ENSHCOG00000012333	hnrnpc	76	50.806	ENSHGLG00000004866	RALYL	79	51.837	Heterocephalus_glaber_female
ENSHCOG00000012333	hnrnpc	76	50.806	ENSHGLG00100017480	RALYL	79	51.837	Heterocephalus_glaber_male
ENSHCOG00000012333	hnrnpc	90	75.000	ENSIPUG00000008666	zgc:55733	93	77.093	Ictalurus_punctatus
ENSHCOG00000012333	hnrnpc	95	68.212	ENSIPUG00000011271	hnrnpc	97	80.085	Ictalurus_punctatus
ENSHCOG00000012333	hnrnpc	76	51.406	ENSSTOG00000012583	RALYL	80	52.245	Ictidomys_tridecemlineatus
ENSHCOG00000012333	hnrnpc	91	83.453	ENSKMAG00000018265	-	81	83.883	Kryptolebias_marmoratus
ENSHCOG00000012333	hnrnpc	96	73.401	ENSKMAG00000011170	-	82	79.104	Kryptolebias_marmoratus
ENSHCOG00000012333	hnrnpc	95	69.966	ENSLBEG00000006979	-	93	65.263	Labrus_bergylta
ENSHCOG00000012333	hnrnpc	96	66.340	ENSLBEG00000024418	-	94	62.207	Labrus_bergylta
ENSHCOG00000012333	hnrnpc	90	84.727	ENSLBEG00000006193	-	82	84.559	Labrus_bergylta
ENSHCOG00000012333	hnrnpc	90	66.429	ENSLOCG00000002560	hnrnpc	89	66.787	Lepisosteus_oculatus
ENSHCOG00000012333	hnrnpc	76	54.468	ENSMNEG00000033288	RALYL	78	53.617	Macaca_nemestrina
ENSHCOG00000012333	hnrnpc	76	54.468	ENSMLEG00000038284	RALYL	78	53.617	Mandrillus_leucophaeus
ENSHCOG00000012333	hnrnpc	91	85.305	ENSMAMG00000008033	-	87	85.878	Mastacembelus_armatus
ENSHCOG00000012333	hnrnpc	87	78.067	ENSMAMG00000012236	-	83	80.812	Mastacembelus_armatus
ENSHCOG00000012333	hnrnpc	96	69.435	ENSMZEG00005020460	-	84	76.753	Maylandia_zebra
ENSHCOG00000012333	hnrnpc	91	85.663	ENSMZEG00005024249	-	82	86.131	Maylandia_zebra
ENSHCOG00000012333	hnrnpc	76	51.004	ENSMAUG00000015149	Ralyl	79	52.245	Mesocricetus_auratus
ENSHCOG00000012333	hnrnpc	76	52.101	ENSMICG00000005558	RALYL	79	76.923	Microcebus_murinus
ENSHCOG00000012333	hnrnpc	89	46.939	ENSMOCG00000017371	Ralyl	79	52.245	Microtus_ochrogaster
ENSHCOG00000012333	hnrnpc	85	81.992	ENSMMOG00000019520	-	82	84.513	Mola_mola
ENSHCOG00000012333	hnrnpc	90	75.273	ENSMMOG00000021465	-	90	78.148	Mola_mola
ENSHCOG00000012333	hnrnpc	91	81.949	ENSMALG00000014623	-	82	81.985	Monopterus_albus
ENSHCOG00000012333	hnrnpc	87	70.412	ENSMALG00000007520	-	83	71.756	Monopterus_albus
ENSHCOG00000012333	hnrnpc	76	51.004	ENSMUSG00000039717	Ralyl	92	75.641	Mus_musculus
ENSHCOG00000012333	hnrnpc	76	51.807	ENSMPUG00000010724	RALYL	79	51.429	Mustela_putorius_furo
ENSHCOG00000012333	hnrnpc	76	51.004	ENSNGAG00000013375	Ralyl	79	52.245	Nannospalax_galili
ENSHCOG00000012333	hnrnpc	88	75.556	ENSNBRG00000004912	-	93	75.210	Neolamprologus_brichardi
ENSHCOG00000012333	hnrnpc	91	86.022	ENSNBRG00000015676	-	82	86.496	Neolamprologus_brichardi
ENSHCOG00000012333	hnrnpc	76	54.468	ENSNLEG00000002702	RALYL	74	53.617	Nomascus_leucogenys
ENSHCOG00000012333	hnrnpc	62	48.293	ENSOPRG00000013650	-	98	48.020	Ochotona_princeps
ENSHCOG00000012333	hnrnpc	75	52.917	ENSODEG00000001012	RALYL	77	52.083	Octodon_degus
ENSHCOG00000012333	hnrnpc	88	75.180	ENSONIG00000007859	-	92	74.820	Oreochromis_niloticus
ENSHCOG00000012333	hnrnpc	91	86.022	ENSONIG00000018350	-	82	86.496	Oreochromis_niloticus
ENSHCOG00000012333	hnrnpc	86	68.539	ENSORLG00000009999	-	84	68.132	Oryzias_latipes
ENSHCOG00000012333	hnrnpc	91	81.754	ENSORLG00000003144	-	91	73.397	Oryzias_latipes
ENSHCOG00000012333	hnrnpc	86	68.165	ENSORLG00020018228	hnrnpc	84	67.766	Oryzias_latipes_hni
ENSHCOG00000012333	hnrnpc	91	81.754	ENSORLG00015009460	-	80	82.143	Oryzias_latipes_hsok
ENSHCOG00000012333	hnrnpc	86	68.539	ENSORLG00015019755	-	84	68.132	Oryzias_latipes_hsok
ENSHCOG00000012333	hnrnpc	86	69.663	ENSOMEG00000020488	-	93	63.787	Oryzias_melastigma
ENSHCOG00000012333	hnrnpc	91	84.173	ENSOMEG00000022665	-	82	84.615	Oryzias_melastigma
ENSHCOG00000012333	hnrnpc	76	54.468	ENSPPAG00000038705	RALYL	78	53.617	Pan_paniscus
ENSHCOG00000012333	hnrnpc	76	54.393	ENSPPRG00000018612	RALYL	78	54.043	Panthera_pardus
ENSHCOG00000012333	hnrnpc	76	54.393	ENSPTIG00000020331	RALYL	78	54.043	Panthera_tigris_altaica
ENSHCOG00000012333	hnrnpc	76	54.468	ENSPTRG00000020381	RALYL	78	53.617	Pan_troglodytes
ENSHCOG00000012333	hnrnpc	76	54.468	ENSPANG00000029305	RALYL	78	53.617	Papio_anubis
ENSHCOG00000012333	hnrnpc	91	74.468	ENSPKIG00000008592	-	89	71.380	Paramormyrops_kingsleyae
ENSHCOG00000012333	hnrnpc	91	71.831	ENSPKIG00000022837	-	82	77.206	Paramormyrops_kingsleyae
ENSHCOG00000012333	hnrnpc	76	52.209	ENSPSIG00000011135	RALYL	78	52.245	Pelodiscus_sinensis
ENSHCOG00000012333	hnrnpc	75	88.158	ENSPMGG00000013144	-	83	84.483	Periophthalmus_magnuspinnatus
ENSHCOG00000012333	hnrnpc	71	76.606	ENSPMGG00000017774	-	90	59.307	Periophthalmus_magnuspinnatus
ENSHCOG00000012333	hnrnpc	76	51.004	ENSPEMG00000016447	Ralyl	79	52.245	Peromyscus_maniculatus_bairdii
ENSHCOG00000012333	hnrnpc	73	52.743	ENSPMAG00000002407	RALYL	97	51.477	Petromyzon_marinus
ENSHCOG00000012333	hnrnpc	91	83.394	ENSPFOG00000002643	-	81	83.456	Poecilia_formosa
ENSHCOG00000012333	hnrnpc	95	70.748	ENSPFOG00000001583	-	84	74.265	Poecilia_formosa
ENSHCOG00000012333	hnrnpc	91	83.394	ENSPLAG00000000061	-	80	83.456	Poecilia_latipinna
ENSHCOG00000012333	hnrnpc	95	69.388	ENSPLAG00000015305	-	84	72.794	Poecilia_latipinna
ENSHCOG00000012333	hnrnpc	95	72.203	ENSPMEG00000004802	-	84	73.897	Poecilia_mexicana
ENSHCOG00000012333	hnrnpc	91	82.671	ENSPMEG00000016524	-	81	77.206	Poecilia_mexicana
ENSHCOG00000012333	hnrnpc	91	83.032	ENSPREG00000001852	-	87	83.088	Poecilia_reticulata
ENSHCOG00000012333	hnrnpc	86	73.684	ENSPREG00000007928	-	84	73.529	Poecilia_reticulata
ENSHCOG00000012333	hnrnpc	51	69.725	ENSPPYG00000018710	-	72	69.725	Pongo_abelii
ENSHCOG00000012333	hnrnpc	90	45.791	ENSPVAG00000010821	RALYL	78	51.020	Pteropus_vampyrus
ENSHCOG00000012333	hnrnpc	97	70.470	ENSPNYG00000020293	-	86	77.358	Pundamilia_nyererei
ENSHCOG00000012333	hnrnpc	91	86.022	ENSPNYG00000003747	-	88	86.496	Pundamilia_nyererei
ENSHCOG00000012333	hnrnpc	84	75.969	ENSPNAG00000015686	hnrnpc	87	77.941	Pygocentrus_nattereri
ENSHCOG00000012333	hnrnpc	90	69.314	ENSPNAG00000019200	zgc:55733	83	70.229	Pygocentrus_nattereri
ENSHCOG00000012333	hnrnpc	76	54.468	ENSRROG00000023925	RALYL	81	75.000	Rhinopithecus_roxellana
ENSHCOG00000012333	hnrnpc	91	71.378	ENSSFOG00015012015	-	82	79.825	Scleropages_formosus
ENSHCOG00000012333	hnrnpc	89	75.000	ENSSFOG00015012924	-	80	97.468	Scleropages_formosus
ENSHCOG00000012333	hnrnpc	86	77.358	ENSSMAG00000013592	-	83	77.289	Scophthalmus_maximus
ENSHCOG00000012333	hnrnpc	89	83.942	ENSSMAG00000011147	-	79	89.381	Scophthalmus_maximus
ENSHCOG00000012333	hnrnpc	95	76.451	ENSSDUG00000001723	-	83	80.074	Seriola_dumerili
ENSHCOG00000012333	hnrnpc	91	79.496	ENSSDUG00000006730	-	93	74.510	Seriola_dumerili
ENSHCOG00000012333	hnrnpc	95	76.792	ENSSLDG00000007454	-	84	80.443	Seriola_lalandi_dorsalis
ENSHCOG00000012333	hnrnpc	91	79.496	ENSSLDG00000007474	-	90	82.051	Seriola_lalandi_dorsalis
ENSHCOG00000012333	hnrnpc	91	86.643	ENSSPAG00000013996	-	82	86.765	Stegastes_partitus
ENSHCOG00000012333	hnrnpc	95	73.379	ENSSPAG00000023204	-	83	80.074	Stegastes_partitus
ENSHCOG00000012333	hnrnpc	75	52.869	ENSTGUG00000011689	RALYL	78	52.500	Taeniopygia_guttata
ENSHCOG00000012333	hnrnpc	90	73.646	ENSTRUG00000020158	-	82	76.806	Takifugu_rubripes
ENSHCOG00000012333	hnrnpc	89	68.978	ENSTNIG00000007427	-	82	68.441	Tetraodon_nigroviridis
ENSHCOG00000012333	hnrnpc	87	73.684	ENSTNIG00000000334	-	92	75.000	Tetraodon_nigroviridis
ENSHCOG00000012333	hnrnpc	75	44.583	ENSTBEG00000005551	RALYL	89	47.083	Tupaia_belangeri
ENSHCOG00000012333	hnrnpc	72	51.282	ENSTTRG00000015762	RALYL	73	52.000	Tursiops_truncatus
ENSHCOG00000012333	hnrnpc	76	49.160	ENSVPAG00000008501	RALYL	78	49.787	Vicugna_pacos
ENSHCOG00000012333	hnrnpc	96	64.590	ENSXCOG00000006552	-	92	62.162	Xiphophorus_couchianus
ENSHCOG00000012333	hnrnpc	51	90.184	ENSXCOG00000019434	-	68	89.375	Xiphophorus_couchianus
ENSHCOG00000012333	hnrnpc	95	70.508	ENSXMAG00000009333	-	84	72.426	Xiphophorus_maculatus
ENSHCOG00000012333	hnrnpc	91	83.394	ENSXMAG00000022849	-	85	83.456	Xiphophorus_maculatus