EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012376 (Gene tree)
Gene ID: 109524183
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5696 bases
Position: chrKV880216.1:1224328-1230023
Accession: 109524183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009867	MMR_HSR1	PF01926.23	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016099	-	2345	XM_019883857	ENSHCOP00000009867	243 (aa)	XP_019739416	UPI00094EA847

Gene Model

Click here to download ENSHCOG00000012376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012376	rab12	67	36.905	ENSHCOG00000005802	RAB9A	80	37.143
ENSHCOG00000012376	rab12	67	39.759	ENSHCOG00000015692	si:dkey-34d22.5	76	39.759
ENSHCOG00000012376	rab12	70	49.112	ENSHCOG00000019468	rab1ba	84	49.112
ENSHCOG00000012376	rab12	66	40.000	ENSHCOG00000006550	-	76	40.000
ENSHCOG00000012376	rab12	77	40.212	ENSHCOG00000000954	-	81	41.143
ENSHCOG00000012376	rab12	73	49.153	ENSHCOG00000017123	-	82	49.153
ENSHCOG00000012376	rab12	71	50.000	ENSHCOG00000007440	rab13	94	50.000
ENSHCOG00000012376	rab12	65	30.818	ENSHCOG00000003667	rhebl1	85	30.818
ENSHCOG00000012376	rab12	58	36.986	ENSHCOG00000013919	rab23	74	36.076
ENSHCOG00000012376	rab12	72	37.566	ENSHCOG00000003569	rab33ba	77	37.566
ENSHCOG00000012376	rab12	67	44.172	ENSHCOG00000006538	si:dkey-16l2.16	77	44.172
ENSHCOG00000012376	rab12	80	41.624	ENSHCOG00000014428	rab2a	85	43.094
ENSHCOG00000012376	rab12	66	35.758	ENSHCOG00000020527	rab34a	62	35.758
ENSHCOG00000012376	rab12	70	49.112	ENSHCOG00000010023	-	83	49.112
ENSHCOG00000012376	rab12	84	37.799	ENSHCOG00000005652	rab11a	76	41.212
ENSHCOG00000012376	rab12	54	32.836	ENSHCOG00000018456	si:ch73-116o1.2	80	30.952
ENSHCOG00000012376	rab12	84	38.835	ENSHCOG00000013095	rab25a	95	38.350
ENSHCOG00000012376	rab12	81	38.693	ENSHCOG00000000232	rab11al	81	40.000
ENSHCOG00000012376	rab12	82	40.594	ENSHCOG00000007187	rab25b	74	41.714
ENSHCOG00000012376	rab12	65	38.365	ENSHCOG00000004404	rab41	73	39.103
ENSHCOG00000012376	rab12	68	39.645	ENSHCOG00000016322	RAB7A	81	39.645
ENSHCOG00000012376	rab12	71	37.791	ENSHCOG00000004662	rab5c	77	37.079
ENSHCOG00000012376	rab12	68	41.317	ENSHCOG00000003981	RAB39B	78	41.317
ENSHCOG00000012376	rab12	60	36.842	ENSHCOG00000012834	-	64	36.842
ENSHCOG00000012376	rab12	74	35.519	ENSHCOG00000005024	rab9b	90	35.519
ENSHCOG00000012376	rab12	70	39.429	ENSHCOG00000009133	zgc:101559	73	39.884
ENSHCOG00000012376	rab12	90	35.371	ENSHCOG00000004726	rab33a	80	38.000
ENSHCOG00000012376	rab12	86	34.579	ENSHCOG00000013180	-	80	38.728
ENSHCOG00000012376	rab12	67	46.951	ENSHCOG00000002217	rab18b	79	46.951
ENSHCOG00000012376	rab12	68	39.645	ENSHCOG00000004225	-	83	39.645
ENSHCOG00000012376	rab12	68	42.424	ENSHCOG00000002423	rab11bb	75	42.424
ENSHCOG00000012376	rab12	68	43.452	ENSHCOG00000019732	-	78	43.452
ENSHCOG00000012376	rab12	84	37.500	ENSHCOG00000000985	-	77	43.038
ENSHCOG00000012376	rab12	81	36.364	ENSHCOG00000019224	rab14	81	38.857
ENSHCOG00000012376	rab12	50	34.146	ENSHCOG00000002043	rras2	85	30.636
ENSHCOG00000012376	rab12	51	35.484	ENSHCOG00000011080	kras	85	32.099
ENSHCOG00000012376	rab12	68	30.539	ENSHCOG00000013807	rheb	89	30.539
ENSHCOG00000012376	rab12	65	35.220	ENSHCOG00000001145	rab22a	81	35.220
ENSHCOG00000012376	rab12	77	45.161	ENSHCOG00000017086	RAB15	95	40.526
ENSHCOG00000012376	rab12	82	35.000	ENSHCOG00000013130	rab6bb	84	38.286
ENSHCOG00000012376	rab12	72	37.714	ENSHCOG00000014711	rab6ba	84	37.714
ENSHCOG00000012376	rab12	67	36.905	ENSHCOG00000004086	rab9a	83	36.905
ENSHCOG00000012376	rab12	72	36.782	ENSHCOG00000020238	-	77	36.782
ENSHCOG00000012376	rab12	79	45.596	ENSHCOG00000001137	rab1ab	83	49.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012376	rab12	100	77.642	ENSG00000206418	RAB12	100	81.707	Homo_sapiens
ENSHCOG00000012376	rab12	89	75.342	ENSAMEG00000007452	RAB12	99	75.758	Ailuropoda_melanoleuca
ENSHCOG00000012376	rab12	100	90.984	ENSACIG00000020616	rab12	100	91.803	Amphilophus_citrinellus
ENSHCOG00000012376	rab12	100	91.770	ENSAOCG00000002130	rab12	100	91.770	Amphiprion_ocellaris
ENSHCOG00000012376	rab12	100	91.770	ENSAPEG00000013255	rab12	100	91.770	Amphiprion_percula
ENSHCOG00000012376	rab12	100	91.358	ENSATEG00000019683	rab12	100	91.770	Anabas_testudineus
ENSHCOG00000012376	rab12	89	83.105	ENSACAG00000003360	RAB12	93	82.845	Anolis_carolinensis
ENSHCOG00000012376	rab12	100	91.770	ENSACLG00000007696	rab12	100	91.770	Astatotilapia_calliptera
ENSHCOG00000012376	rab12	100	85.366	ENSAMXG00000004882	rab12	100	86.179	Astyanax_mexicanus
ENSHCOG00000012376	rab12	100	77.236	ENSBTAG00000010356	RAB12	100	81.301	Bos_taurus
ENSHCOG00000012376	rab12	93	81.057	ENSCJAG00000015468	RAB12	72	81.707	Callithrix_jacchus
ENSHCOG00000012376	rab12	100	77.642	ENSCAFG00020023721	RAB12	84	81.707	Canis_lupus_dingo
ENSHCOG00000012376	rab12	100	77.236	ENSCHIG00000016103	RAB12	100	81.301	Capra_hircus
ENSHCOG00000012376	rab12	86	82.857	ENSCPOG00000022689	RAB12	100	87.143	Cavia_porcellus
ENSHCOG00000012376	rab12	100	78.049	ENSCCAG00000022862	RAB12	100	81.707	Cebus_capucinus
ENSHCOG00000012376	rab12	91	81.696	ENSCATG00000037784	RAB12	99	81.590	Cercocebus_atys
ENSHCOG00000012376	rab12	84	85.366	ENSCSAG00000017569	RAB12	72	80.645	Chlorocebus_sabaeus
ENSHCOG00000012376	rab12	100	76.829	ENSCPBG00000028375	RAB12	100	80.081	Chrysemys_picta_bellii
ENSHCOG00000012376	rab12	89	81.735	ENSCANG00000031453	RAB12	99	85.388	Colobus_angolensis_palliatus
ENSHCOG00000012376	rab12	100	77.236	ENSCGRG00001006958	Rab12	83	80.488	Cricetulus_griseus_chok1gshd
ENSHCOG00000012376	rab12	100	92.181	ENSCSEG00000016933	rab12	100	92.181	Cynoglossus_semilaevis
ENSHCOG00000012376	rab12	100	89.024	ENSCVAG00000003539	rab12	100	89.837	Cyprinodon_variegatus
ENSHCOG00000012376	rab12	100	83.951	ENSDARG00000089428	rab12	100	83.951	Danio_rerio
ENSHCOG00000012376	rab12	84	85.366	ENSDNOG00000046064	RAB12	56	81.224	Dasypus_novemcinctus
ENSHCOG00000012376	rab12	91	82.143	ENSDORG00000008920	Rab12	99	85.714	Dipodomys_ordii
ENSHCOG00000012376	rab12	78	63.684	ENSEBUG00000006581	rab12	91	63.684	Eptatretus_burgeri
ENSHCOG00000012376	rab12	100	77.642	ENSEASG00005002926	RAB12	83	81.301	Equus_asinus_asinus
ENSHCOG00000012376	rab12	93	80.617	ENSECAG00000007384	RAB12	71	81.301	Equus_caballus
ENSHCOG00000012376	rab12	100	87.243	ENSELUG00000007123	rab12	100	87.243	Esox_lucius
ENSHCOG00000012376	rab12	93	80.617	ENSFCAG00000027710	RAB12	72	81.707	Felis_catus
ENSHCOG00000012376	rab12	100	88.980	ENSFHEG00000004319	rab12	100	90.612	Fundulus_heteroclitus
ENSHCOG00000012376	rab12	86	88.038	ENSGMOG00000012335	rab12	87	88.517	Gadus_morhua
ENSHCOG00000012376	rab12	93	81.140	ENSGALG00000033608	RAB12	96	82.573	Gallus_gallus
ENSHCOG00000012376	rab12	90	88.532	ENSGACG00000016639	rab12	100	88.991	Gasterosteus_aculeatus
ENSHCOG00000012376	rab12	100	76.829	ENSGAGG00000007278	RAB12	100	80.081	Gopherus_agassizii
ENSHCOG00000012376	rab12	100	91.770	ENSHBUG00000008497	rab12	100	91.770	Haplochromis_burtoni
ENSHCOG00000012376	rab12	84	82.039	ENSHGLG00000006189	RAB12	86	85.520	Heterocephalus_glaber_female
ENSHCOG00000012376	rab12	91	89.140	ENSIPUG00000017401	rab12	100	84.016	Ictalurus_punctatus
ENSHCOG00000012376	rab12	92	79.646	ENSSTOG00000025122	RAB12	96	85.845	Ictidomys_tridecemlineatus
ENSHCOG00000012376	rab12	91	81.696	ENSJJAG00000019064	Rab12	98	85.268	Jaculus_jaculus
ENSHCOG00000012376	rab12	100	88.066	ENSKMAG00000020056	rab12	100	88.066	Kryptolebias_marmoratus
ENSHCOG00000012376	rab12	100	90.535	ENSLBEG00000013756	rab12	100	91.358	Labrus_bergylta
ENSHCOG00000012376	rab12	91	84.305	ENSLACG00000010461	RAB12	100	79.116	Latimeria_chalumnae
ENSHCOG00000012376	rab12	100	82.258	ENSLOCG00000002680	rab12	100	84.000	Lepisosteus_oculatus
ENSHCOG00000012376	rab12	100	78.049	ENSMFAG00000043551	RAB12	100	81.301	Macaca_fascicularis
ENSHCOG00000012376	rab12	91	81.696	ENSMNEG00000040853	RAB12	93	82.627	Macaca_nemestrina
ENSHCOG00000012376	rab12	100	92.181	ENSMAMG00000006862	rab12	100	92.593	Mastacembelus_armatus
ENSHCOG00000012376	rab12	100	91.770	ENSMZEG00005024316	rab12	100	91.770	Maylandia_zebra
ENSHCOG00000012376	rab12	83	82.353	ENSMGAG00000009197	RAB12	100	86.275	Meleagris_gallopavo
ENSHCOG00000012376	rab12	100	77.236	ENSMAUG00000008371	Rab12	83	80.488	Mesocricetus_auratus
ENSHCOG00000012376	rab12	91	81.696	ENSMICG00000030661	RAB12	99	83.193	Microcebus_murinus
ENSHCOG00000012376	rab12	89	81.735	ENSMOCG00000000452	Rab12	100	85.388	Microtus_ochrogaster
ENSHCOG00000012376	rab12	93	81.498	ENSMODG00000021452	RAB12	73	81.707	Monodelphis_domestica
ENSHCOG00000012376	rab12	100	90.947	ENSMALG00000015762	rab12	100	91.358	Monopterus_albus
ENSHCOG00000012376	rab12	93	81.057	MGP_CAROLIEiJ_G0021839	Rab12	84	81.301	Mus_caroli
ENSHCOG00000012376	rab12	100	78.049	ENSMUSG00000023460	Rab12	100	81.301	Mus_musculus
ENSHCOG00000012376	rab12	100	78.049	MGP_PahariEiJ_G0020826	Rab12	100	81.301	Mus_pahari
ENSHCOG00000012376	rab12	93	81.057	MGP_SPRETEiJ_G0022750	Rab12	83	81.301	Mus_spretus
ENSHCOG00000012376	rab12	100	77.236	ENSMLUG00000002883	RAB12	100	80.894	Myotis_lucifugus
ENSHCOG00000012376	rab12	91	81.250	ENSNGAG00000024103	-	96	84.821	Nannospalax_galili
ENSHCOG00000012376	rab12	91	75.000	ENSNGAG00000019722	-	100	71.951	Nannospalax_galili
ENSHCOG00000012376	rab12	100	91.770	ENSNBRG00000014428	rab12	100	91.770	Neolamprologus_brichardi
ENSHCOG00000012376	rab12	100	77.642	ENSNLEG00000006939	RAB12	100	81.707	Nomascus_leucogenys
ENSHCOG00000012376	rab12	100	78.862	ENSMEUG00000000493	RAB12	100	82.114	Notamacropus_eugenii
ENSHCOG00000012376	rab12	84	83.010	ENSODEG00000006414	RAB12	100	86.301	Octodon_degus
ENSHCOG00000012376	rab12	100	91.358	ENSONIG00000018469	rab12	100	91.358	Oreochromis_niloticus
ENSHCOG00000012376	rab12	100	90.535	ENSORLG00000003902	rab12	100	90.947	Oryzias_latipes
ENSHCOG00000012376	rab12	100	90.123	ENSORLG00020005131	rab12	100	90.535	Oryzias_latipes_hni
ENSHCOG00000012376	rab12	100	90.123	ENSORLG00015007869	rab12	100	90.535	Oryzias_latipes_hsok
ENSHCOG00000012376	rab12	100	91.358	ENSOMEG00000008191	rab12	100	91.770	Oryzias_melastigma
ENSHCOG00000012376	rab12	86	82.381	ENSOGAG00000028002	RAB12	99	86.190	Otolemur_garnettii
ENSHCOG00000012376	rab12	86	81.905	ENSOARG00000000728	RAB12	99	77.273	Ovis_aries
ENSHCOG00000012376	rab12	84	81.643	ENSPPAG00000009152	RAB12	97	85.922	Pan_paniscus
ENSHCOG00000012376	rab12	100	77.642	ENSPPRG00000024521	RAB12	100	81.707	Panthera_pardus
ENSHCOG00000012376	rab12	100	77.642	ENSPTRG00000009853	RAB12	100	81.707	Pan_troglodytes
ENSHCOG00000012376	rab12	100	78.138	ENSPANG00000009320	RAB12	100	81.377	Papio_anubis
ENSHCOG00000012376	rab12	100	84.836	ENSPKIG00000008579	rab12	100	85.185	Paramormyrops_kingsleyae
ENSHCOG00000012376	rab12	100	85.597	ENSPMGG00000001890	rab12	100	88.066	Periophthalmus_magnuspinnatus
ENSHCOG00000012376	rab12	100	77.642	ENSPEMG00000021032	Rab12	84	80.894	Peromyscus_maniculatus_bairdii
ENSHCOG00000012376	rab12	93	81.938	ENSPCIG00000010453	RAB12	61	82.114	Phascolarctos_cinereus
ENSHCOG00000012376	rab12	100	88.115	ENSPFOG00000001579	rab12	100	89.388	Poecilia_formosa
ENSHCOG00000012376	rab12	100	88.115	ENSPLAG00000013594	rab12	100	89.388	Poecilia_latipinna
ENSHCOG00000012376	rab12	100	88.115	ENSPMEG00000010417	rab12	100	89.388	Poecilia_mexicana
ENSHCOG00000012376	rab12	100	88.115	ENSPREG00000017487	rab12	100	89.796	Poecilia_reticulata
ENSHCOG00000012376	rab12	93	80.617	ENSPPYG00000009015	-	72	81.707	Pongo_abelii
ENSHCOG00000012376	rab12	100	77.642	ENSPCAG00000015007	RAB12	100	81.301	Procavia_capensis
ENSHCOG00000012376	rab12	100	77.642	ENSPCOG00000019816	RAB12	100	81.707	Propithecus_coquereli
ENSHCOG00000012376	rab12	100	77.236	ENSPVAG00000002757	RAB12	100	81.301	Pteropus_vampyrus
ENSHCOG00000012376	rab12	100	91.770	ENSPNYG00000005654	rab12	100	91.770	Pundamilia_nyererei
ENSHCOG00000012376	rab12	100	91.770	ENSPNYG00000023905	rab12	100	91.770	Pundamilia_nyererei
ENSHCOG00000012376	rab12	100	84.959	ENSPNAG00000015031	rab12	100	85.772	Pygocentrus_nattereri
ENSHCOG00000012376	rab12	100	74.699	ENSRNOG00000019295	Rab12	100	76.305	Rattus_norvegicus
ENSHCOG00000012376	rab12	91	81.696	ENSRBIG00000028760	RAB12	99	83.550	Rhinopithecus_bieti
ENSHCOG00000012376	rab12	91	81.696	ENSRROG00000019249	RAB12	94	85.268	Rhinopithecus_roxellana
ENSHCOG00000012376	rab12	85	81.818	ENSSBOG00000021125	RAB12	88	77.966	Saimiri_boliviensis_boliviensis
ENSHCOG00000012376	rab12	93	80.973	ENSSHAG00000001489	RAB12	100	80.973	Sarcophilus_harrisii
ENSHCOG00000012376	rab12	100	90.947	ENSSMAG00000012678	rab12	100	91.358	Scophthalmus_maximus
ENSHCOG00000012376	rab12	100	92.181	ENSSDUG00000008505	rab12	100	92.593	Seriola_dumerili
ENSHCOG00000012376	rab12	100	92.181	ENSSLDG00000022239	rab12	100	92.593	Seriola_lalandi_dorsalis
ENSHCOG00000012376	rab12	100	77.642	ENSSPUG00000003222	RAB12	100	80.894	Sphenodon_punctatus
ENSHCOG00000012376	rab12	100	91.770	ENSSPAG00000010822	rab12	100	91.770	Stegastes_partitus
ENSHCOG00000012376	rab12	100	77.236	ENSSSCG00000038026	RAB12	100	81.707	Sus_scrofa
ENSHCOG00000012376	rab12	93	81.579	ENSTGUG00000009889	RAB12	100	81.200	Taeniopygia_guttata
ENSHCOG00000012376	rab12	100	88.889	ENSTRUG00000024455	rab12	100	88.889	Takifugu_rubripes
ENSHCOG00000012376	rab12	100	89.712	ENSTNIG00000014859	rab12	100	89.712	Tetraodon_nigroviridis
ENSHCOG00000012376	rab12	89	81.735	ENSTTRG00000008711	RAB12	99	85.388	Tursiops_truncatus
ENSHCOG00000012376	rab12	100	77.642	ENSUAMG00000018092	RAB12	100	81.707	Ursus_americanus
ENSHCOG00000012376	rab12	90	80.995	ENSVVUG00000011748	RAB12	99	84.615	Vulpes_vulpes
ENSHCOG00000012376	rab12	89	84.475	ENSXETG00000004289	rab12	74	84.052	Xenopus_tropicalis
ENSHCOG00000012376	rab12	100	88.115	ENSXCOG00000019310	rab12	100	89.796	Xiphophorus_couchianus
ENSHCOG00000012376	rab12	100	88.525	ENSXMAG00000023617	rab12	100	90.204	Xiphophorus_maculatus