EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000012544 (Gene tree)
Gene ID: 109532102
Gene Symbol: gtpbp6
Alias: fc56b07|wu:fc56b07|wu:fl82e09
Full Name: putative GTP-binding protein 6
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10389 bases
Position: chrKV880451.1:7365933-7376321
Accession: 109532102
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000009887	MMR_HSR1	PF01926.23	1.2e-13	1	1
ENSHCOP00000009927	MMR_HSR1	PF01926.23	1.9e-13	1	1
ENSHCOP00000009920	MMR_HSR1	PF01926.23	2.1e-13	1	1
ENSHCOP00000009906	MMR_HSR1	PF01926.23	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016173	-	1410	-	ENSHCOP00000009906	469 (aa)	-	-
ENSHCOT00000016179	-	1344	-	ENSHCOP00000009920	447 (aa)	-	-
ENSHCOT00000016185	-	1275	-	ENSHCOP00000009927	424 (aa)	-	-
ENSHCOT00000016139	-	939	XM_019896753	ENSHCOP00000009887	312 (aa)	XP_019752312	-

Gene Model

Click here to download ENSHCOG00000012544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012544	gtpbp6	91	60.000	ENSG00000178605	GTPBP6	82	47.294	Homo_sapiens
ENSHCOG00000012544	gtpbp6	93	75.433	ENSAPOG00000001396	gtpbp6	79	76.224	Acanthochromis_polyacanthus
ENSHCOG00000012544	gtpbp6	91	58.947	ENSAMEG00000001958	GTPBP6	90	45.882	Ailuropoda_melanoleuca
ENSHCOG00000012544	gtpbp6	80	76.305	ENSACIG00000001694	gtpbp6	61	76.305	Amphilophus_citrinellus
ENSHCOG00000012544	gtpbp6	91	75.789	ENSAOCG00000014817	gtpbp6	79	75.958	Amphiprion_ocellaris
ENSHCOG00000012544	gtpbp6	91	75.789	ENSAPEG00000017894	gtpbp6	79	75.958	Amphiprion_percula
ENSHCOG00000012544	gtpbp6	91	77.895	ENSATEG00000012768	gtpbp6	79	77.700	Anabas_testudineus
ENSHCOG00000012544	gtpbp6	91	63.509	ENSAPLG00000005592	GTPBP6	75	60.586	Anas_platyrhynchos
ENSHCOG00000012544	gtpbp6	95	63.973	ENSACAG00000011834	GTPBP6	82	50.939	Anolis_carolinensis
ENSHCOG00000012544	gtpbp6	91	76.140	ENSACLG00000002216	gtpbp6	78	76.307	Astatotilapia_calliptera
ENSHCOG00000012544	gtpbp6	91	69.474	ENSAMXG00000012493	gtpbp6	74	69.580	Astyanax_mexicanus
ENSHCOG00000012544	gtpbp6	91	59.649	ENSBTAG00000054315	GTPBP6	59	56.678	Bos_taurus
ENSHCOG00000012544	gtpbp6	91	59.649	ENSCJAG00000013056	GTPBP6	87	56.678	Callithrix_jacchus
ENSHCOG00000012544	gtpbp6	91	59.649	ENSCAFG00000010931	GTPBP6	81	46.588	Canis_familiaris
ENSHCOG00000012544	gtpbp6	91	59.298	ENSCAFG00020001279	-	81	46.353	Canis_lupus_dingo
ENSHCOG00000012544	gtpbp6	91	59.649	ENSCAFG00020010766	-	81	46.588	Canis_lupus_dingo
ENSHCOG00000012544	gtpbp6	91	60.000	ENSCHIG00000000121	GTPBP6	82	46.588	Capra_hircus
ENSHCOG00000012544	gtpbp6	91	60.000	ENSCCAG00000032874	GTPBP6	83	47.100	Cebus_capucinus
ENSHCOG00000012544	gtpbp6	91	60.351	ENSCATG00000024945	GTPBP6	83	47.100	Cercocebus_atys
ENSHCOG00000012544	gtpbp6	59	68.707	ENSCLAG00000000054	-	69	64.103	Chinchilla_lanigera
ENSHCOG00000012544	gtpbp6	82	61.719	ENSCSAG00000018371	-	99	61.868	Chlorocebus_sabaeus
ENSHCOG00000012544	gtpbp6	91	62.456	ENSCPBG00000007520	GTPBP6	95	45.049	Chrysemys_picta_bellii
ENSHCOG00000012544	gtpbp6	78	41.091	ENSCSAVG00000009232	-	64	41.091	Ciona_savignyi
ENSHCOG00000012544	gtpbp6	84	60.920	ENSCGRG00001022411	Gtpbp6	52	61.069	Cricetulus_griseus_chok1gshd
ENSHCOG00000012544	gtpbp6	84	60.920	ENSCGRG00000007715	Gtpbp6	61	61.069	Cricetulus_griseus_crigri
ENSHCOG00000012544	gtpbp6	91	75.439	ENSCSEG00000007271	gtpbp6	86	55.909	Cynoglossus_semilaevis
ENSHCOG00000012544	gtpbp6	91	76.140	ENSCVAG00000015417	gtpbp6	73	76.307	Cyprinodon_variegatus
ENSHCOG00000012544	gtpbp6	91	70.877	ENSDARG00000061091	gtpbp6	80	55.862	Danio_rerio
ENSHCOG00000012544	gtpbp6	64	61.194	ENSDNOG00000039508	GTPBP6	95	42.788	Dasypus_novemcinctus
ENSHCOG00000012544	gtpbp6	83	42.751	FBgn0039339	CG5116	51	43.233	Drosophila_melanogaster
ENSHCOG00000012544	gtpbp6	91	49.825	ENSEBUG00000000404	gtpbp6	52	50.000	Eptatretus_burgeri
ENSHCOG00000012544	gtpbp6	92	60.279	ENSECAG00000032734	GTPBP6	80	48.341	Equus_caballus
ENSHCOG00000012544	gtpbp6	87	70.111	ENSELUG00000016376	gtpbp6	69	70.111	Esox_lucius
ENSHCOG00000012544	gtpbp6	88	58.545	ENSFCAG00000013263	-	82	46.135	Felis_catus
ENSHCOG00000012544	gtpbp6	88	54.545	ENSFCAG00000010310	-	90	58.222	Felis_catus
ENSHCOG00000012544	gtpbp6	91	61.754	ENSFALG00000004133	GTPBP6	92	47.477	Ficedula_albicollis
ENSHCOG00000012544	gtpbp6	91	75.088	ENSFHEG00000012018	gtpbp6	79	75.175	Fundulus_heteroclitus
ENSHCOG00000012544	gtpbp6	93	70.690	ENSGMOG00000004778	gtpbp6	71	71.429	Gadus_morhua
ENSHCOG00000012544	gtpbp6	91	63.158	ENSGALG00000016717	GTPBP6	76	60.261	Gallus_gallus
ENSHCOG00000012544	gtpbp6	93	73.010	ENSGAFG00000018158	gtpbp6	71	73.776	Gambusia_affinis
ENSHCOG00000012544	gtpbp6	91	78.246	ENSGACG00000013857	gtpbp6	77	72.990	Gasterosteus_aculeatus
ENSHCOG00000012544	gtpbp6	89	64.621	ENSGAGG00000021606	GTPBP6	81	51.313	Gopherus_agassizii
ENSHCOG00000012544	gtpbp6	91	59.859	ENSGGOG00000002792	-	99	60.000	Gorilla_gorilla
ENSHCOG00000012544	gtpbp6	91	76.140	ENSHBUG00000013113	gtpbp6	78	76.307	Haplochromis_burtoni
ENSHCOG00000012544	gtpbp6	91	58.246	ENSHGLG00000000207	GTPBP6	83	46.588	Heterocephalus_glaber_female
ENSHCOG00000012544	gtpbp6	79	57.895	ENSHGLG00100000320	GTPBP6	75	54.478	Heterocephalus_glaber_male
ENSHCOG00000012544	gtpbp6	91	70.175	ENSIPUG00000022531	gtpbp6	80	53.793	Ictalurus_punctatus
ENSHCOG00000012544	gtpbp6	93	74.394	ENSKMAG00000016464	gtpbp6	78	75.175	Kryptolebias_marmoratus
ENSHCOG00000012544	gtpbp6	92	76.307	ENSLBEG00000024203	gtpbp6	79	76.573	Labrus_bergylta
ENSHCOG00000012544	gtpbp6	91	65.263	ENSLACG00000012754	GTPBP6	78	51.826	Latimeria_chalumnae
ENSHCOG00000012544	gtpbp6	91	68.990	ENSLOCG00000008009	gtpbp6	90	53.580	Lepisosteus_oculatus
ENSHCOG00000012544	gtpbp6	91	60.351	ENSMFAG00000041568	GTPBP6	83	47.100	Macaca_fascicularis
ENSHCOG00000012544	gtpbp6	91	58.246	ENSMNEG00000039609	GTPBP6	82	47.922	Macaca_nemestrina
ENSHCOG00000012544	gtpbp6	91	77.895	ENSMAMG00000012631	gtpbp6	78	77.972	Mastacembelus_armatus
ENSHCOG00000012544	gtpbp6	91	75.789	ENSMZEG00005002869	gtpbp6	78	75.958	Maylandia_zebra
ENSHCOG00000012544	gtpbp6	80	64.143	ENSMGAG00000014752	GTPBP6	67	60.662	Meleagris_gallopavo
ENSHCOG00000012544	gtpbp6	91	76.491	ENSMMOG00000005950	gtpbp6	80	76.307	Mola_mola
ENSHCOG00000012544	gtpbp6	91	63.509	ENSMODG00000000326	GTPBP6	92	49.188	Monodelphis_domestica
ENSHCOG00000012544	gtpbp6	91	77.465	ENSMALG00000014993	gtpbp6	79	77.273	Monopterus_albus
ENSHCOG00000012544	gtpbp6	92	57.343	MGP_CAROLIEiJ_G0027536	Gtpbp6	60	54.397	Mus_caroli
ENSHCOG00000012544	gtpbp6	96	56.711	ENSMUSG00000033434	Gtpbp6	83	45.412	Mus_musculus
ENSHCOG00000012544	gtpbp6	96	56.376	MGP_SPRETEiJ_G0028534	Gtpbp6	83	45.176	Mus_spretus
ENSHCOG00000012544	gtpbp6	91	60.351	ENSMPUG00000001536	GTPBP6	66	57.329	Mustela_putorius_furo
ENSHCOG00000012544	gtpbp6	88	61.455	ENSNGAG00000011609	Gtpbp6	56	60.627	Nannospalax_galili
ENSHCOG00000012544	gtpbp6	91	77.544	ENSNBRG00000017629	gtpbp6	78	77.700	Neolamprologus_brichardi
ENSHCOG00000012544	gtpbp6	91	62.105	ENSODEG00000001052	GTPBP6	63	58.576	Octodon_degus
ENSHCOG00000012544	gtpbp6	93	75.862	ENSONIG00000007330	gtpbp6	70	77.003	Oreochromis_niloticus
ENSHCOG00000012544	gtpbp6	91	46.528	ENSOANG00000007007	-	94	37.327	Ornithorhynchus_anatinus
ENSHCOG00000012544	gtpbp6	56	59.887	ENSOANG00000014278	-	92	59.887	Ornithorhynchus_anatinus
ENSHCOG00000012544	gtpbp6	91	58.596	ENSOCUG00000008245	GTPBP6	83	46.588	Oryctolagus_cuniculus
ENSHCOG00000012544	gtpbp6	91	75.000	ENSORLG00000016077	gtpbp6	77	74.913	Oryzias_latipes
ENSHCOG00000012544	gtpbp6	91	74.648	ENSORLG00020018687	gtpbp6	77	74.564	Oryzias_latipes_hni
ENSHCOG00000012544	gtpbp6	91	74.648	ENSORLG00015014255	gtpbp6	77	74.564	Oryzias_latipes_hsok
ENSHCOG00000012544	gtpbp6	91	75.439	ENSOMEG00000004496	gtpbp6	77	75.610	Oryzias_melastigma
ENSHCOG00000012544	gtpbp6	91	60.490	ENSOGAG00000011327	GTPBP6	85	60.627	Otolemur_garnettii
ENSHCOG00000012544	gtpbp6	93	59.107	ENSOARG00000000946	GTPBP6	70	60.069	Ovis_aries
ENSHCOG00000012544	gtpbp6	84	58.779	ENSPPAG00000028400	-	62	55.477	Pan_paniscus
ENSHCOG00000012544	gtpbp6	82	57.031	ENSPPRG00000004932	-	83	43.133	Panthera_pardus
ENSHCOG00000012544	gtpbp6	82	46.275	ENSPPRG00000006710	-	80	36.715	Panthera_pardus
ENSHCOG00000012544	gtpbp6	91	60.000	ENSPTRG00000050696	GTPBP6	82	47.294	Pan_troglodytes
ENSHCOG00000012544	gtpbp6	91	61.053	ENSPANG00000011580	GTPBP6	83	47.332	Papio_anubis
ENSHCOG00000012544	gtpbp6	91	72.281	ENSPKIG00000022514	gtpbp6	77	55.349	Paramormyrops_kingsleyae
ENSHCOG00000012544	gtpbp6	91	61.754	ENSPSIG00000013117	GTPBP6	76	58.958	Pelodiscus_sinensis
ENSHCOG00000012544	gtpbp6	91	52.113	ENSPMAG00000006496	gtpbp6	71	52.113	Petromyzon_marinus
ENSHCOG00000012544	gtpbp6	91	64.211	ENSPCIG00000016456	GTPBP6	80	54.569	Phascolarctos_cinereus
ENSHCOG00000012544	gtpbp6	93	74.394	ENSPFOG00000015695	gtpbp6	77	74.126	Poecilia_formosa
ENSHCOG00000012544	gtpbp6	93	74.048	ENSPLAG00000015495	gtpbp6	78	74.825	Poecilia_latipinna
ENSHCOG00000012544	gtpbp6	93	74.394	ENSPMEG00000000859	gtpbp6	78	75.175	Poecilia_mexicana
ENSHCOG00000012544	gtpbp6	93	74.048	ENSPREG00000017643	gtpbp6	78	74.825	Poecilia_reticulata
ENSHCOG00000012544	gtpbp6	87	59.559	ENSPPYG00000020075	-	99	59.707	Pongo_abelii
ENSHCOG00000012544	gtpbp6	91	76.140	ENSPNYG00000000521	gtpbp6	77	76.307	Pundamilia_nyererei
ENSHCOG00000012544	gtpbp6	91	69.123	ENSPNAG00000002094	gtpbp6	66	69.231	Pygocentrus_nattereri
ENSHCOG00000012544	gtpbp6	91	56.842	ENSRNOG00000037426	Gtpbp6	83	44.471	Rattus_norvegicus
ENSHCOG00000012544	gtpbp6	91	56.842	ENSRNOG00000048168	Gtpbp6	83	44.471	Rattus_norvegicus
ENSHCOG00000012544	gtpbp6	91	60.351	ENSRBIG00000027538	GTPBP6	83	47.564	Rhinopithecus_bieti
ENSHCOG00000012544	gtpbp6	91	60.351	ENSRROG00000033503	GTPBP6	83	49.024	Rhinopithecus_roxellana
ENSHCOG00000012544	gtpbp6	91	64.211	ENSSHAG00000015570	GTPBP6	83	49.074	Sarcophilus_harrisii
ENSHCOG00000012544	gtpbp6	91	69.474	ENSSFOG00015004098	gtpbp6	77	53.563	Scleropages_formosus
ENSHCOG00000012544	gtpbp6	91	77.193	ENSSMAG00000019520	gtpbp6	79	77.273	Scophthalmus_maximus
ENSHCOG00000012544	gtpbp6	91	75.439	ENSSDUG00000002202	gtpbp6	79	75.524	Seriola_dumerili
ENSHCOG00000012544	gtpbp6	91	75.439	ENSSLDG00000023633	gtpbp6	76	75.524	Seriola_lalandi_dorsalis
ENSHCOG00000012544	gtpbp6	91	64.789	ENSSPUG00000005537	GTPBP6	60	61.564	Sphenodon_punctatus
ENSHCOG00000012544	gtpbp6	91	75.704	ENSSPAG00000017331	gtpbp6	96	75.610	Stegastes_partitus
ENSHCOG00000012544	gtpbp6	91	75.704	ENSSPAG00000017406	gtpbp6	79	75.610	Stegastes_partitus
ENSHCOG00000012544	gtpbp6	91	59.298	ENSSSCG00000033858	-	82	46.824	Sus_scrofa
ENSHCOG00000012544	gtpbp6	91	59.298	ENSSSCG00000037491	-	80	50.263	Sus_scrofa
ENSHCOG00000012544	gtpbp6	91	61.404	ENSTGUG00000010642	-	96	48.730	Taeniopygia_guttata
ENSHCOG00000012544	gtpbp6	91	75.439	ENSTRUG00000011175	gtpbp6	78	75.261	Takifugu_rubripes
ENSHCOG00000012544	gtpbp6	93	73.883	ENSTNIG00000010659	gtpbp6	98	60.095	Tetraodon_nigroviridis
ENSHCOG00000012544	gtpbp6	91	58.246	ENSUMAG00000018848	GTPBP6	76	55.375	Ursus_maritimus
ENSHCOG00000012544	gtpbp6	79	59.514	ENSVVUG00000008199	GTPBP6	76	37.810	Vulpes_vulpes
ENSHCOG00000012544	gtpbp6	91	64.912	ENSXETG00000004125	gtpbp6	72	65.035	Xenopus_tropicalis
ENSHCOG00000012544	gtpbp6	71	56.846	ENSXCOG00000006281	gtpbp6	72	56.846	Xiphophorus_couchianus
ENSHCOG00000012544	gtpbp6	93	73.702	ENSXMAG00000015980	gtpbp6	78	74.476	Xiphophorus_maculatus