EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1460 bases
Position: chrKV880229.1:55601-57060
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023852	RRM_1	PF00076.22	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016487	-	312	-	ENSHCOP00000023852	103 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000012719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012719	-	76	88.462	ENSHCOG00000002851	-	71	88.462
ENSHCOG00000012719	-	80	33.735	ENSHCOG00000012571	rbm14b	54	33.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012719	-	83	81.818	ENSG00000184672	RALYL	92	88.462	Homo_sapiens
ENSHCOG00000012719	-	76	94.872	ENSAPOG00000005050	RALYL	76	94.872	Acanthochromis_polyacanthus
ENSHCOG00000012719	-	71	79.452	ENSAPOG00000020641	-	86	79.452	Acanthochromis_polyacanthus
ENSHCOG00000012719	-	83	92.941	ENSACIG00000001335	-	71	92.941	Amphilophus_citrinellus
ENSHCOG00000012719	-	77	96.203	ENSAPEG00000010582	-	77	96.203	Amphiprion_percula
ENSHCOG00000012719	-	81	86.747	ENSAPEG00000021452	-	80	86.747	Amphiprion_percula
ENSHCOG00000012719	-	76	89.744	ENSCCAG00000025003	RALYL	76	89.744	Cebus_capucinus
ENSHCOG00000012719	-	82	86.905	ENSCSEG00000019406	-	81	86.905	Cynoglossus_semilaevis
ENSHCOG00000012719	-	77	88.608	ENSFHEG00000000223	-	81	88.608	Fundulus_heteroclitus
ENSHCOG00000012719	-	82	91.667	ENSFHEG00000017466	-	59	91.667	Fundulus_heteroclitus
ENSHCOG00000012719	-	79	87.654	ENSGAFG00000020052	-	78	87.654	Gambusia_affinis
ENSHCOG00000012719	-	76	97.436	ENSGAFG00000018541	RALYL	76	97.436	Gambusia_affinis
ENSHCOG00000012719	-	76	92.308	ENSLACG00000000135	-	88	92.308	Latimeria_chalumnae
ENSHCOG00000012719	-	76	80.769	ENSMMUG00000003920	-	80	80.769	Macaca_mulatta
ENSHCOG00000012719	-	80	93.976	ENSMAMG00000011137	RALYL	86	93.976	Mastacembelus_armatus
ENSHCOG00000012719	-	78	86.250	ENSMICG00000005558	RALYL	81	86.250	Microcebus_murinus
ENSHCOG00000012719	-	85	89.888	ENSMMOG00000004599	-	82	89.888	Mola_mola
ENSHCOG00000012719	-	85	80.220	ENSMODG00000029239	-	88	80.220	Monodelphis_domestica
ENSHCOG00000012719	-	83	80.682	ENSMUSG00000039717	Ralyl	92	87.179	Mus_musculus
ENSHCOG00000012719	-	85	81.319	ENSOANG00000030197	-	61	81.319	Ornithorhynchus_anatinus
ENSHCOG00000012719	-	76	92.308	ENSPKIG00000023807	RALYL	80	92.308	Paramormyrops_kingsleyae
ENSHCOG00000012719	-	85	80.220	ENSPCIG00000023938	-	79	80.220	Phascolarctos_cinereus
ENSHCOG00000012719	-	77	88.608	ENSRROG00000023925	RALYL	80	88.608	Rhinopithecus_roxellana
ENSHCOG00000012719	-	77	81.013	ENSSFOG00015012924	-	80	81.013	Scleropages_formosus
ENSHCOG00000012719	-	78	78.750	ENSSLDG00000008069	-	76	78.750	Seriola_lalandi_dorsalis
ENSHCOG00000012719	-	83	90.909	ENSSPAG00000014679	-	93	90.909	Stegastes_partitus
ENSHCOG00000012719	-	78	95.000	ENSTRUG00000021320	RALYL	87	95.000	Takifugu_rubripes
ENSHCOG00000012719	-	82	76.190	ENSTRUG00000002153	-	62	76.190	Takifugu_rubripes
ENSHCOG00000012719	-	78	80.000	ENSUAMG00000006020	-	83	80.000	Ursus_americanus
ENSHCOG00000012719	-	78	87.500	ENSXCOG00000016096	-	69	87.500	Xiphophorus_couchianus