EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000012774 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 19578 bases
Position: chrKV879709.1:128565-148142
Accession: 109516745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010004	Exo_endo_phos	PF03372.23	3.9e-10	1	1
ENSHCOP00000010031	Exo_endo_phos	PF03372.23	5.7e-10	1	1
ENSHCOP00000023768	Exo_endo_phos	PF03372.23	5.7e-10	1	1
ENSHCOP00000010004	DUF1866	PF08952.11	8.7e-58	1	1
ENSHCOP00000010031	DUF1866	PF08952.11	8.7e-58	1	1
ENSHCOP00000023768	DUF1866	PF08952.11	8.7e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016340	-	3702	-	ENSHCOP00000010031	1233 (aa)	-	-
ENSHCOT00000016305	-	3690	-	ENSHCOP00000010004	1229 (aa)	-	-
ENSHCOT00000026026	-	3702	XM_019871517	ENSHCOP00000023768	1233 (aa)	XP_019727076	-

Gene Model

Click here to download ENSHCOG00000012774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012774's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012774	synj1	96	66.143	ENSG00000159082	SYNJ1	100	82.022	Homo_sapiens
ENSHCOG00000012774	synj1	90	95.591	ENSAPOG00000002809	synj1	95	94.990	Acanthochromis_polyacanthus
ENSHCOG00000012774	synj1	94	65.450	ENSAMEG00000015028	SYNJ1	82	63.198	Ailuropoda_melanoleuca
ENSHCOG00000012774	synj1	97	88.978	ENSACIG00000008857	synj1	95	88.538	Amphilophus_citrinellus
ENSHCOG00000012774	synj1	96	87.898	ENSAOCG00000009835	synj1	95	95.591	Amphiprion_ocellaris
ENSHCOG00000012774	synj1	96	77.110	ENSAPEG00000021010	synj1	79	79.924	Amphiprion_percula
ENSHCOG00000012774	synj1	96	76.555	ENSATEG00000002306	synj1	79	78.347	Anabas_testudineus
ENSHCOG00000012774	synj1	86	71.583	ENSAPLG00000011832	SYNJ1	82	60.847	Anas_platyrhynchos
ENSHCOG00000012774	synj1	85	73.540	ENSACAG00000003006	-	99	61.538	Anolis_carolinensis
ENSHCOG00000012774	synj1	98	64.216	ENSANAG00000027325	SYNJ1	99	64.291	Aotus_nancymaae
ENSHCOG00000012774	synj1	96	94.389	ENSACLG00000002255	synj1	95	94.389	Astatotilapia_calliptera
ENSHCOG00000012774	synj1	96	76.157	ENSAMXG00000008208	synj1	80	75.561	Astyanax_mexicanus
ENSHCOG00000012774	synj1	95	66.322	ENSBTAG00000003063	SYNJ1	85	70.044	Bos_taurus
ENSHCOG00000012774	synj1	96	66.197	ENSCJAG00000009187	SYNJ1	97	63.927	Callithrix_jacchus
ENSHCOG00000012774	synj1	96	66.140	ENSCAFG00000009041	SYNJ1	99	65.211	Canis_familiaris
ENSHCOG00000012774	synj1	97	66.328	ENSCAFG00020025776	SYNJ1	97	64.852	Canis_lupus_dingo
ENSHCOG00000012774	synj1	86	72.884	ENSCHIG00000005095	SYNJ1	83	65.549	Capra_hircus
ENSHCOG00000012774	synj1	97	65.938	ENSTSYG00000014541	SYNJ1	99	63.988	Carlito_syrichta
ENSHCOG00000012774	synj1	81	63.628	ENSCAPG00000014483	SYNJ1	77	60.236	Cavia_aperea
ENSHCOG00000012774	synj1	95	67.069	ENSCPOG00000012182	SYNJ1	99	63.844	Cavia_porcellus
ENSHCOG00000012774	synj1	96	65.681	ENSCCAG00000020825	SYNJ1	99	64.368	Cebus_capucinus
ENSHCOG00000012774	synj1	96	65.187	ENSCATG00000033891	SYNJ1	99	66.218	Cercocebus_atys
ENSHCOG00000012774	synj1	85	72.928	ENSCLAG00000009796	SYNJ1	100	77.266	Chinchilla_lanigera
ENSHCOG00000012774	synj1	87	71.875	ENSCSAG00000009654	SYNJ1	99	63.997	Chlorocebus_sabaeus
ENSHCOG00000012774	synj1	93	68.408	ENSCPBG00000006402	SYNJ1	96	67.910	Chrysemys_picta_bellii
ENSHCOG00000012774	synj1	96	65.934	ENSCANG00000031359	SYNJ1	99	64.379	Colobus_angolensis_palliatus
ENSHCOG00000012774	synj1	96	65.640	ENSCGRG00001010861	Synj1	99	63.484	Cricetulus_griseus_chok1gshd
ENSHCOG00000012774	synj1	86	71.454	ENSCGRG00000015749	Synj1	100	76.691	Cricetulus_griseus_crigri
ENSHCOG00000012774	synj1	94	94.589	ENSCSEG00000019614	synj1	94	94.589	Cynoglossus_semilaevis
ENSHCOG00000012774	synj1	96	83.993	ENSCVAG00000019250	synj1	95	88.190	Cyprinodon_variegatus
ENSHCOG00000012774	synj1	82	89.379	ENSDARG00000025011	synj1	95	89.379	Danio_rerio
ENSHCOG00000012774	synj1	94	61.905	ENSDNOG00000010732	SYNJ1	84	61.174	Dasypus_novemcinctus
ENSHCOG00000012774	synj1	54	77.266	ENSDORG00000014735	-	100	77.266	Dipodomys_ordii
ENSHCOG00000012774	synj1	86	78.030	ENSETEG00000018674	SYNJ1	61	78.327	Echinops_telfairi
ENSHCOG00000012774	synj1	96	66.719	ENSEASG00005006287	SYNJ1	96	74.711	Equus_asinus_asinus
ENSHCOG00000012774	synj1	96	66.852	ENSECAG00000004829	SYNJ1	99	66.297	Equus_caballus
ENSHCOG00000012774	synj1	71	71.398	ENSEEUG00000005150	SYNJ1	77	71.398	Erinaceus_europaeus
ENSHCOG00000012774	synj1	96	88.778	ENSELUG00000009731	synj1	95	85.853	Esox_lucius
ENSHCOG00000012774	synj1	87	72.464	ENSFCAG00000012498	SYNJ1	99	64.489	Felis_catus
ENSHCOG00000012774	synj1	58	65.695	ENSFALG00000004680	SYNJ1	78	52.049	Ficedula_albicollis
ENSHCOG00000012774	synj1	95	65.349	ENSFDAG00000016818	SYNJ1	100	77.554	Fukomys_damarensis
ENSHCOG00000012774	synj1	96	93.587	ENSFHEG00000017689	synj1	77	93.587	Fundulus_heteroclitus
ENSHCOG00000012774	synj1	79	90.982	ENSGMOG00000014852	synj1	75	90.982	Gadus_morhua
ENSHCOG00000012774	synj1	96	65.987	ENSGALG00000034317	SYNJ1	81	64.637	Gallus_gallus
ENSHCOG00000012774	synj1	96	93.587	ENSGAFG00000019466	synj1	77	93.587	Gambusia_affinis
ENSHCOG00000012774	synj1	96	93.988	ENSGACG00000020575	synj1	95	93.988	Gasterosteus_aculeatus
ENSHCOG00000012774	synj1	96	66.224	ENSGAGG00000022523	SYNJ1	99	60.346	Gopherus_agassizii
ENSHCOG00000012774	synj1	96	65.986	ENSGGOG00000015945	SYNJ1	99	66.035	Gorilla_gorilla
ENSHCOG00000012774	synj1	96	94.389	ENSHBUG00000007774	synj1	95	94.389	Haplochromis_burtoni
ENSHCOG00000012774	synj1	85	72.744	ENSHGLG00000006420	SYNJ1	100	77.122	Heterocephalus_glaber_female
ENSHCOG00000012774	synj1	94	67.790	ENSHGLG00100012591	SYNJ1	100	77.122	Heterocephalus_glaber_male
ENSHCOG00000012774	synj1	95	89.379	ENSIPUG00000010691	SYNJ1	79	89.379	Ictalurus_punctatus
ENSHCOG00000012774	synj1	95	65.394	ENSSTOG00000015806	SYNJ1	99	64.390	Ictidomys_tridecemlineatus
ENSHCOG00000012774	synj1	94	60.812	ENSJJAG00000020168	Synj1	82	59.740	Jaculus_jaculus
ENSHCOG00000012774	synj1	86	93.387	ENSKMAG00000004221	synj1	95	80.499	Kryptolebias_marmoratus
ENSHCOG00000012774	synj1	97	90.857	ENSLBEG00000015081	synj1	94	90.857	Labrus_bergylta
ENSHCOG00000012774	synj1	80	82.365	ENSLACG00000005928	SYNJ1	68	82.365	Latimeria_chalumnae
ENSHCOG00000012774	synj1	82	87.600	ENSLOCG00000009230	synj1	72	87.600	Lepisosteus_oculatus
ENSHCOG00000012774	synj1	83	72.991	ENSLAFG00000011806	SYNJ1	83	60.343	Loxodonta_africana
ENSHCOG00000012774	synj1	85	71.349	ENSMFAG00000018883	SYNJ1	98	63.651	Macaca_fascicularis
ENSHCOG00000012774	synj1	87	72.054	ENSMMUG00000004624	SYNJ1	86	70.588	Macaca_mulatta
ENSHCOG00000012774	synj1	87	72.934	ENSMNEG00000040077	SYNJ1	81	70.413	Macaca_nemestrina
ENSHCOG00000012774	synj1	87	72.442	ENSMLEG00000037029	SYNJ1	99	64.439	Mandrillus_leucophaeus
ENSHCOG00000012774	synj1	96	94.188	ENSMAMG00000013404	synj1	76	94.188	Mastacembelus_armatus
ENSHCOG00000012774	synj1	96	94.990	ENSMZEG00005024358	synj1	95	94.990	Maylandia_zebra
ENSHCOG00000012774	synj1	96	63.359	ENSMGAG00000014522	SYNJ1	82	62.386	Meleagris_gallopavo
ENSHCOG00000012774	synj1	86	71.725	ENSMAUG00000009743	Synj1	100	76.691	Mesocricetus_auratus
ENSHCOG00000012774	synj1	96	66.667	ENSMICG00000034953	SYNJ1	99	66.167	Microcebus_murinus
ENSHCOG00000012774	synj1	97	94.790	ENSMMOG00000010203	synj1	94	94.790	Mola_mola
ENSHCOG00000012774	synj1	87	68.072	ENSMODG00000021073	SYNJ1	99	56.992	Monodelphis_domestica
ENSHCOG00000012774	synj1	82	95.391	ENSMALG00000014015	synj1	76	95.391	Monopterus_albus
ENSHCOG00000012774	synj1	86	71.906	MGP_CAROLIEiJ_G0020951	Synj1	100	77.122	Mus_caroli
ENSHCOG00000012774	synj1	86	72.087	ENSMUSG00000022973	Synj1	100	77.122	Mus_musculus
ENSHCOG00000012774	synj1	86	71.906	MGP_PahariEiJ_G0016656	Synj1	100	77.122	Mus_pahari
ENSHCOG00000012774	synj1	86	72.087	MGP_SPRETEiJ_G0021857	Synj1	100	77.122	Mus_spretus
ENSHCOG00000012774	synj1	85	72.628	ENSMPUG00000001153	SYNJ1	84	63.055	Mustela_putorius_furo
ENSHCOG00000012774	synj1	52	75.369	ENSMLUG00000026584	-	100	75.744	Myotis_lucifugus
ENSHCOG00000012774	synj1	95	63.519	ENSNGAG00000000453	Synj1	100	76.835	Nannospalax_galili
ENSHCOG00000012774	synj1	96	81.431	ENSNBRG00000011936	synj1	96	79.185	Neolamprologus_brichardi
ENSHCOG00000012774	synj1	81	61.585	ENSNLEG00000003734	SYNJ1	98	60.633	Nomascus_leucogenys
ENSHCOG00000012774	synj1	73	79.924	ENSMEUG00000004158	-	63	80.228	Notamacropus_eugenii
ENSHCOG00000012774	synj1	74	84.186	ENSOPRG00000013602	SYNJ1	75	69.268	Ochotona_princeps
ENSHCOG00000012774	synj1	54	76.978	ENSODEG00000002409	-	100	76.978	Octodon_degus
ENSHCOG00000012774	synj1	96	76.846	ENSONIG00000004667	synj1	87	94.990	Oreochromis_niloticus
ENSHCOG00000012774	synj1	82	71.936	ENSOANG00000006929	SYNJ1	82	60.094	Ornithorhynchus_anatinus
ENSHCOG00000012774	synj1	94	62.401	ENSOCUG00000001420	SYNJ1	82	64.815	Oryctolagus_cuniculus
ENSHCOG00000012774	synj1	96	84.330	ENSORLG00000004320	synj1	95	91.784	Oryzias_latipes
ENSHCOG00000012774	synj1	82	92.184	ENSORLG00020011994	synj1	95	92.184	Oryzias_latipes_hni
ENSHCOG00000012774	synj1	82	92.184	ENSORLG00015018077	synj1	74	92.184	Oryzias_latipes_hsok
ENSHCOG00000012774	synj1	96	92.385	ENSOMEG00000014322	synj1	95	87.810	Oryzias_melastigma
ENSHCOG00000012774	synj1	98	61.756	ENSOGAG00000006010	SYNJ1	82	60.970	Otolemur_garnettii
ENSHCOG00000012774	synj1	86	72.007	ENSOARG00000013414	SYNJ1	70	69.626	Ovis_aries
ENSHCOG00000012774	synj1	96	66.064	ENSPPAG00000026784	SYNJ1	99	64.611	Pan_paniscus
ENSHCOG00000012774	synj1	87	72.464	ENSPPRG00000023469	SYNJ1	99	64.489	Panthera_pardus
ENSHCOG00000012774	synj1	95	67.951	ENSPTIG00000007930	SYNJ1	99	64.566	Panthera_tigris_altaica
ENSHCOG00000012774	synj1	96	66.064	ENSPTRG00000023787	SYNJ1	99	66.119	Pan_troglodytes
ENSHCOG00000012774	synj1	96	66.064	ENSPTRG00000048135	-	99	66.119	Pan_troglodytes
ENSHCOG00000012774	synj1	87	72.662	ENSPANG00000022531	SYNJ1	99	64.538	Papio_anubis
ENSHCOG00000012774	synj1	82	88.778	ENSPKIG00000022603	synj1	88	88.778	Paramormyrops_kingsleyae
ENSHCOG00000012774	synj1	99	89.143	ENSPMGG00000016831	synj1	92	89.143	Periophthalmus_magnuspinnatus
ENSHCOG00000012774	synj1	96	64.286	ENSPEMG00000018767	Synj1	100	77.122	Peromyscus_maniculatus_bairdii
ENSHCOG00000012774	synj1	81	56.184	ENSPMAG00000002887	synj1	95	60.861	Petromyzon_marinus
ENSHCOG00000012774	synj1	96	65.375	ENSPCIG00000016372	SYNJ1	99	63.062	Phascolarctos_cinereus
ENSHCOG00000012774	synj1	96	93.000	ENSPFOG00000016886	synj1	95	93.000	Poecilia_formosa
ENSHCOG00000012774	synj1	96	93.186	ENSPLAG00000017559	synj1	95	88.571	Poecilia_latipinna
ENSHCOG00000012774	synj1	96	76.988	ENSPMEG00000007643	synj1	80	76.422	Poecilia_mexicana
ENSHCOG00000012774	synj1	96	93.788	ENSPREG00000012412	synj1	95	93.186	Poecilia_reticulata
ENSHCOG00000012774	synj1	87	71.696	ENSPPYG00000011365	SYNJ1	94	63.629	Pongo_abelii
ENSHCOG00000012774	synj1	77	85.714	ENSPCAG00000009906	SYNJ1	57	85.714	Procavia_capensis
ENSHCOG00000012774	synj1	84	77.136	ENSPCOG00000024841	SYNJ1	96	60.178	Propithecus_coquereli
ENSHCOG00000012774	synj1	86	67.594	ENSPVAG00000000892	SYNJ1	83	58.258	Pteropus_vampyrus
ENSHCOG00000012774	synj1	96	81.107	ENSPNYG00000022989	synj1	95	94.188	Pundamilia_nyererei
ENSHCOG00000012774	synj1	82	89.980	ENSPNAG00000021119	synj1	88	89.980	Pygocentrus_nattereri
ENSHCOG00000012774	synj1	95	65.490	ENSRNOG00000002051	Synj1	99	64.593	Rattus_norvegicus
ENSHCOG00000012774	synj1	96	65.829	ENSRBIG00000034477	SYNJ1	99	64.363	Rhinopithecus_bieti
ENSHCOG00000012774	synj1	87	72.323	ENSRROG00000039256	SYNJ1	99	64.379	Rhinopithecus_roxellana
ENSHCOG00000012774	synj1	96	65.520	ENSSBOG00000021001	SYNJ1	99	64.444	Saimiri_boliviensis_boliviensis
ENSHCOG00000012774	synj1	83	73.037	ENSSHAG00000008538	SYNJ1	84	58.340	Sarcophilus_harrisii
ENSHCOG00000012774	synj1	96	73.010	ENSSFOG00015006095	synj1	83	74.194	Scleropages_formosus
ENSHCOG00000012774	synj1	97	89.714	ENSSMAG00000018066	synj1	94	89.714	Scophthalmus_maximus
ENSHCOG00000012774	synj1	96	79.693	ENSSDUG00000013058	synj1	79	79.313	Seriola_dumerili
ENSHCOG00000012774	synj1	82	95.190	ENSSLDG00000021406	synj1	94	95.190	Seriola_lalandi_dorsalis
ENSHCOG00000012774	synj1	96	67.510	ENSSPUG00000012552	SYNJ1	82	65.319	Sphenodon_punctatus
ENSHCOG00000012774	synj1	97	85.563	ENSSPAG00000017029	synj1	95	91.429	Stegastes_partitus
ENSHCOG00000012774	synj1	79	88.645	ENSSPAG00000006812	SYNJ1	78	78.191	Stegastes_partitus
ENSHCOG00000012774	synj1	96	65.571	ENSSSCG00000012035	SYNJ1	99	64.341	Sus_scrofa
ENSHCOG00000012774	synj1	96	65.061	ENSTGUG00000013445	SYNJ1	82	63.838	Taeniopygia_guttata
ENSHCOG00000012774	synj1	97	94.188	ENSTRUG00000006907	synj1	92	94.188	Takifugu_rubripes
ENSHCOG00000012774	synj1	82	86.907	ENSTNIG00000009940	synj1	93	85.490	Tetraodon_nigroviridis
ENSHCOG00000012774	synj1	68	84.416	ENSTBEG00000016298	SYNJ1	60	72.627	Tupaia_belangeri
ENSHCOG00000012774	synj1	96	59.179	ENSTTRG00000002222	SYNJ1	72	63.862	Tursiops_truncatus
ENSHCOG00000012774	synj1	97	65.964	ENSUAMG00000018606	SYNJ1	98	76.076	Ursus_americanus
ENSHCOG00000012774	synj1	97	66.042	ENSUMAG00000018419	SYNJ1	99	75.953	Ursus_maritimus
ENSHCOG00000012774	synj1	73	85.714	ENSVPAG00000001241	SYNJ1	58	85.714	Vicugna_pacos
ENSHCOG00000012774	synj1	97	65.575	ENSVVUG00000023125	SYNJ1	99	63.969	Vulpes_vulpes
ENSHCOG00000012774	synj1	94	80.762	ENSXETG00000009899	synj1	79	80.762	Xenopus_tropicalis
ENSHCOG00000012774	synj1	96	93.587	ENSXCOG00000011896	synj1	95	93.587	Xiphophorus_couchianus
ENSHCOG00000012774	synj1	96	93.387	ENSXMAG00000017524	synj1	95	93.387	Xiphophorus_maculatus