EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012787 (Gene tree)
Gene ID: 109532279
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10372 bases
Position: chrKV880451.1:7315699-7326070
Accession: 109532279
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010195	ResIII	PF04851.15	7.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016539	-	2715	XM_019897071	ENSHCOP00000010195	904 (aa)	XP_019752630	-

Gene Model

Click here to download ENSHCOG00000012787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012787	chd1l	50	32.121	ENSHCOG00000004764	rad54b	66	30.280
ENSHCOG00000012787	chd1l	60	42.549	ENSHCOG00000005458	smarca5	53	42.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012787	chd1l	92	62.919	ENSG00000131778	CHD1L	96	63.866	Homo_sapiens
ENSHCOG00000012787	chd1l	93	78.538	ENSAPOG00000001539	chd1l	96	78.235	Acanthochromis_polyacanthus
ENSHCOG00000012787	chd1l	92	63.126	ENSAMEG00000017063	CHD1L	93	62.649	Ailuropoda_melanoleuca
ENSHCOG00000012787	chd1l	92	77.621	ENSACIG00000001164	chd1l	100	75.682	Amphilophus_citrinellus
ENSHCOG00000012787	chd1l	93	78.538	ENSAOCG00000014510	chd1l	83	78.394	Amphiprion_ocellaris
ENSHCOG00000012787	chd1l	93	75.768	ENSAPEG00000017450	chd1l	93	75.414	Amphiprion_percula
ENSHCOG00000012787	chd1l	95	74.828	ENSAPEG00000017573	chd1l	95	74.828	Amphiprion_percula
ENSHCOG00000012787	chd1l	96	75.282	ENSATEG00000013058	chd1l	94	74.718	Anabas_testudineus
ENSHCOG00000012787	chd1l	92	62.172	ENSAPLG00000009976	CHD1L	93	62.172	Anas_platyrhynchos
ENSHCOG00000012787	chd1l	92	59.255	ENSACAG00000017686	CHD1L	94	59.281	Anolis_carolinensis
ENSHCOG00000012787	chd1l	92	63.560	ENSANAG00000024347	CHD1L	93	63.202	Aotus_nancymaae
ENSHCOG00000012787	chd1l	94	77.126	ENSACLG00000019304	chd1l	97	75.257	Astatotilapia_calliptera
ENSHCOG00000012787	chd1l	92	63.615	ENSAMXG00000012367	chd1l	84	63.108	Astyanax_mexicanus
ENSHCOG00000012787	chd1l	92	63.799	ENSBTAG00000020831	CHD1L	95	62.998	Bos_taurus
ENSHCOG00000012787	chd1l	92	63.441	ENSCJAG00000002406	CHD1L	93	63.082	Callithrix_jacchus
ENSHCOG00000012787	chd1l	92	61.051	ENSCAFG00000010944	CHD1L	93	60.573	Canis_familiaris
ENSHCOG00000012787	chd1l	95	61.301	ENSCAFG00020020121	CHD1L	97	61.944	Canis_lupus_dingo
ENSHCOG00000012787	chd1l	94	63.115	ENSCHIG00000013871	CHD1L	96	63.115	Capra_hircus
ENSHCOG00000012787	chd1l	91	63.145	ENSTSYG00000003005	CHD1L	97	62.785	Carlito_syrichta
ENSHCOG00000012787	chd1l	92	61.848	ENSCPOG00000009000	CHD1L	94	61.466	Cavia_porcellus
ENSHCOG00000012787	chd1l	92	61.244	ENSCCAG00000036079	CHD1L	93	60.885	Cebus_capucinus
ENSHCOG00000012787	chd1l	92	63.321	ENSCATG00000031044	CHD1L	93	62.963	Cercocebus_atys
ENSHCOG00000012787	chd1l	92	63.571	ENSCLAG00000000880	CHD1L	94	63.929	Chinchilla_lanigera
ENSHCOG00000012787	chd1l	92	63.365	ENSCSAG00000018386	CHD1L	93	63.007	Chlorocebus_sabaeus
ENSHCOG00000012787	chd1l	92	64.439	ENSCPBG00000002600	CHD1L	94	64.320	Chrysemys_picta_bellii
ENSHCOG00000012787	chd1l	92	63.604	ENSCANG00000020239	CHD1L	93	63.246	Colobus_angolensis_palliatus
ENSHCOG00000012787	chd1l	93	63.077	ENSCGRG00001021624	Chd1l	96	62.105	Cricetulus_griseus_chok1gshd
ENSHCOG00000012787	chd1l	92	63.007	ENSCGRG00000007554	Chd1l	99	62.028	Cricetulus_griseus_crigri
ENSHCOG00000012787	chd1l	94	72.738	ENSCVAG00000002595	chd1l	91	72.738	Cyprinodon_variegatus
ENSHCOG00000012787	chd1l	93	70.200	ENSDARG00000015471	chd1l	83	70.671	Danio_rerio
ENSHCOG00000012787	chd1l	92	63.321	ENSDNOG00000019504	CHD1L	93	63.441	Dasypus_novemcinctus
ENSHCOG00000012787	chd1l	92	63.002	ENSDORG00000013555	Chd1l	94	62.959	Dipodomys_ordii
ENSHCOG00000012787	chd1l	82	60.146	ENSETEG00000008445	CHD1L	83	60.329	Echinops_telfairi
ENSHCOG00000012787	chd1l	64	72.917	ENSEBUG00000005791	chd1l	76	72.917	Eptatretus_burgeri
ENSHCOG00000012787	chd1l	92	62.963	ENSEASG00005007364	CHD1L	98	62.283	Equus_asinus_asinus
ENSHCOG00000012787	chd1l	92	62.963	ENSECAG00000008915	CHD1L	98	62.283	Equus_caballus
ENSHCOG00000012787	chd1l	93	60.367	ENSELUG00000016844	chd1l	83	60.252	Esox_lucius
ENSHCOG00000012787	chd1l	92	62.888	ENSFCAG00000007777	CHD1L	93	62.530	Felis_catus
ENSHCOG00000012787	chd1l	93	61.420	ENSFALG00000006087	CHD1L	93	61.348	Ficedula_albicollis
ENSHCOG00000012787	chd1l	92	63.604	ENSFDAG00000012431	CHD1L	98	63.604	Fukomys_damarensis
ENSHCOG00000012787	chd1l	92	76.520	ENSFHEG00000012420	chd1l	83	76.162	Fundulus_heteroclitus
ENSHCOG00000012787	chd1l	93	62.130	ENSGALG00000015038	CHD1L	94	62.130	Gallus_gallus
ENSHCOG00000012787	chd1l	94	73.739	ENSGAFG00000018198	chd1l	97	71.647	Gambusia_affinis
ENSHCOG00000012787	chd1l	57	78.958	ENSGACG00000014042	chd1l	99	78.958	Gasterosteus_aculeatus
ENSHCOG00000012787	chd1l	92	64.421	ENSGAGG00000014432	CHD1L	96	64.184	Gopherus_agassizii
ENSHCOG00000012787	chd1l	92	63.095	ENSGGOG00000001067	CHD1L	94	62.589	Gorilla_gorilla
ENSHCOG00000012787	chd1l	94	77.011	ENSHBUG00000007464	chd1l	98	75.199	Haplochromis_burtoni
ENSHCOG00000012787	chd1l	92	62.455	ENSHGLG00000008933	CHD1L	94	62.455	Heterocephalus_glaber_female
ENSHCOG00000012787	chd1l	91	61.474	ENSHGLG00100007155	CHD1L	97	61.593	Heterocephalus_glaber_male
ENSHCOG00000012787	chd1l	92	66.667	ENSIPUG00000022617	chd1l	82	66.627	Ictalurus_punctatus
ENSHCOG00000012787	chd1l	92	59.215	ENSSTOG00000007032	CHD1L	93	58.977	Ictidomys_tridecemlineatus
ENSHCOG00000012787	chd1l	93	75.472	ENSKMAG00000014358	chd1l	83	75.708	Kryptolebias_marmoratus
ENSHCOG00000012787	chd1l	92	76.000	ENSLBEG00000023845	chd1l	97	75.390	Labrus_bergylta
ENSHCOG00000012787	chd1l	93	59.488	ENSLACG00000006262	CHD1L	85	58.857	Latimeria_chalumnae
ENSHCOG00000012787	chd1l	94	68.614	ENSLOCG00000010574	chd1l	86	68.535	Lepisosteus_oculatus
ENSHCOG00000012787	chd1l	92	62.989	ENSLAFG00000018136	CHD1L	98	62.810	Loxodonta_africana
ENSHCOG00000012787	chd1l	92	63.353	ENSMFAG00000043562	CHD1L	97	62.825	Macaca_fascicularis
ENSHCOG00000012787	chd1l	92	63.441	ENSMMUG00000009024	CHD1L	93	63.082	Macaca_mulatta
ENSHCOG00000012787	chd1l	92	63.441	ENSMNEG00000039905	CHD1L	93	63.082	Macaca_nemestrina
ENSHCOG00000012787	chd1l	92	63.441	ENSMLEG00000030900	CHD1L	93	63.082	Mandrillus_leucophaeus
ENSHCOG00000012787	chd1l	94	75.775	ENSMAMG00000012822	chd1l	99	73.486	Mastacembelus_armatus
ENSHCOG00000012787	chd1l	94	77.241	ENSMZEG00005020830	chd1l	87	76.782	Maylandia_zebra
ENSHCOG00000012787	chd1l	92	61.740	ENSMGAG00000014304	CHD1L	98	62.024	Meleagris_gallopavo
ENSHCOG00000012787	chd1l	92	63.723	ENSMICG00000002497	CHD1L	93	63.126	Microcebus_murinus
ENSHCOG00000012787	chd1l	92	63.432	ENSMOCG00000006305	Chd1l	94	62.959	Microtus_ochrogaster
ENSHCOG00000012787	chd1l	93	71.495	ENSMMOG00000005964	chd1l	89	71.495	Mola_mola
ENSHCOG00000012787	chd1l	92	63.170	ENSMODG00000018717	CHD1L	94	63.766	Monodelphis_domestica
ENSHCOG00000012787	chd1l	94	77.215	ENSMALG00000014675	chd1l	85	76.870	Monopterus_albus
ENSHCOG00000012787	chd1l	92	63.290	MGP_CAROLIEiJ_G0025401	Chd1l	94	63.290	Mus_caroli
ENSHCOG00000012787	chd1l	92	62.530	ENSMUSG00000028089	Chd1l	94	62.648	Mus_musculus
ENSHCOG00000012787	chd1l	92	62.843	MGP_PahariEiJ_G0026845	Chd1l	94	62.843	Mus_pahari
ENSHCOG00000012787	chd1l	92	63.007	MGP_SPRETEiJ_G0026347	Chd1l	94	63.007	Mus_spretus
ENSHCOG00000012787	chd1l	92	63.365	ENSMPUG00000000615	CHD1L	93	62.888	Mustela_putorius_furo
ENSHCOG00000012787	chd1l	92	62.827	ENSMLUG00000007573	CHD1L	93	62.470	Myotis_lucifugus
ENSHCOG00000012787	chd1l	92	59.408	ENSNGAG00000000908	Chd1l	96	58.817	Nannospalax_galili
ENSHCOG00000012787	chd1l	94	73.684	ENSNBRG00000006021	chd1l	95	73.265	Neolamprologus_brichardi
ENSHCOG00000012787	chd1l	92	62.485	ENSNLEG00000000179	CHD1L	93	62.246	Nomascus_leucogenys
ENSHCOG00000012787	chd1l	92	53.580	ENSOPRG00000006973	CHD1L	98	53.580	Ochotona_princeps
ENSHCOG00000012787	chd1l	92	60.142	ENSODEG00000002494	CHD1L	94	60.473	Octodon_degus
ENSHCOG00000012787	chd1l	94	77.011	ENSONIG00000003183	chd1l	88	76.782	Oreochromis_niloticus
ENSHCOG00000012787	chd1l	84	58.951	ENSOANG00000003068	CHD1L	92	60.207	Ornithorhynchus_anatinus
ENSHCOG00000012787	chd1l	92	59.717	ENSOCUG00000009336	CHD1L	93	59.600	Oryctolagus_cuniculus
ENSHCOG00000012787	chd1l	93	72.118	ENSORLG00000003673	chd1l	93	72.353	Oryzias_latipes
ENSHCOG00000012787	chd1l	93	72.685	ENSORLG00020005123	chd1l	93	71.988	Oryzias_latipes_hni
ENSHCOG00000012787	chd1l	93	71.948	ENSORLG00015001680	chd1l	96	72.385	Oryzias_latipes_hsok
ENSHCOG00000012787	chd1l	71	73.423	ENSOMEG00000006109	chd1l	77	73.996	Oryzias_melastigma
ENSHCOG00000012787	chd1l	93	61.882	ENSOGAG00000008775	CHD1L	94	61.502	Otolemur_garnettii
ENSHCOG00000012787	chd1l	94	63.041	ENSOARG00000020547	CHD1L	99	62.998	Ovis_aries
ENSHCOG00000012787	chd1l	92	62.768	ENSPPAG00000039193	CHD1L	97	62.733	Pan_paniscus
ENSHCOG00000012787	chd1l	92	63.290	ENSPPRG00000010258	CHD1L	93	62.932	Panthera_pardus
ENSHCOG00000012787	chd1l	92	62.799	ENSPTRG00000001220	CHD1L	93	62.799	Pan_troglodytes
ENSHCOG00000012787	chd1l	92	63.365	ENSPANG00000009170	CHD1L	93	63.007	Papio_anubis
ENSHCOG00000012787	chd1l	95	68.088	ENSPKIG00000022166	chd1l	94	67.774	Paramormyrops_kingsleyae
ENSHCOG00000012787	chd1l	92	64.124	ENSPSIG00000012595	CHD1L	93	64.124	Pelodiscus_sinensis
ENSHCOG00000012787	chd1l	92	62.959	ENSPEMG00000013528	Chd1l	94	62.604	Peromyscus_maniculatus_bairdii
ENSHCOG00000012787	chd1l	88	62.407	ENSPCIG00000030409	CHD1L	97	62.779	Phascolarctos_cinereus
ENSHCOG00000012787	chd1l	94	73.502	ENSPFOG00000015948	chd1l	85	73.272	Poecilia_formosa
ENSHCOG00000012787	chd1l	94	73.425	ENSPLAG00000015145	chd1l	97	73.310	Poecilia_latipinna
ENSHCOG00000012787	chd1l	94	74.108	ENSPMEG00000008720	chd1l	90	73.533	Poecilia_mexicana
ENSHCOG00000012787	chd1l	94	73.479	ENSPREG00000017885	chd1l	98	73.249	Poecilia_reticulata
ENSHCOG00000012787	chd1l	92	63.441	ENSPPYG00000000946	CHD1L	93	63.082	Pongo_abelii
ENSHCOG00000012787	chd1l	87	57.755	ENSPCAG00000005959	CHD1L	89	57.519	Procavia_capensis
ENSHCOG00000012787	chd1l	92	59.042	ENSPVAG00000006084	CHD1L	98	58.513	Pteropus_vampyrus
ENSHCOG00000012787	chd1l	94	75.882	ENSPNYG00000013001	chd1l	97	75.427	Pundamilia_nyererei
ENSHCOG00000012787	chd1l	94	69.965	ENSPNAG00000011881	chd1l	84	70.196	Pygocentrus_nattereri
ENSHCOG00000012787	chd1l	92	63.164	ENSRNOG00000017669	Chd1l	94	63.164	Rattus_norvegicus
ENSHCOG00000012787	chd1l	92	63.484	ENSRBIG00000041272	CHD1L	93	63.126	Rhinopithecus_bieti
ENSHCOG00000012787	chd1l	92	63.680	ENSRROG00000041354	CHD1L	94	63.183	Rhinopithecus_roxellana
ENSHCOG00000012787	chd1l	92	61.842	ENSSHAG00000017395	CHD1L	93	62.201	Sarcophilus_harrisii
ENSHCOG00000012787	chd1l	94	66.935	ENSSFOG00015003649	chd1l	98	65.632	Scleropages_formosus
ENSHCOG00000012787	chd1l	92	74.737	ENSSMAG00000019377	chd1l	94	74.175	Scophthalmus_maximus
ENSHCOG00000012787	chd1l	92	80.024	ENSSDUG00000019831	chd1l	93	80.024	Seriola_dumerili
ENSHCOG00000012787	chd1l	91	79.426	ENSSLDG00000012714	chd1l	93	79.426	Seriola_lalandi_dorsalis
ENSHCOG00000012787	chd1l	92	61.575	ENSSPUG00000016865	CHD1L	94	61.979	Sphenodon_punctatus
ENSHCOG00000012787	chd1l	93	78.210	ENSSPAG00000017653	chd1l	89	78.066	Stegastes_partitus
ENSHCOG00000012787	chd1l	92	61.842	ENSSSCG00000006701	CHD1L	94	61.483	Sus_scrofa
ENSHCOG00000012787	chd1l	93	61.629	ENSTGUG00000013392	-	97	61.629	Taeniopygia_guttata
ENSHCOG00000012787	chd1l	92	66.232	ENSTNIG00000004902	chd1l	99	66.114	Tetraodon_nigroviridis
ENSHCOG00000012787	chd1l	92	60.599	ENSTTRG00000011711	CHD1L	97	60.240	Tursiops_truncatus
ENSHCOG00000012787	chd1l	94	62.077	ENSUAMG00000021991	CHD1L	96	62.559	Ursus_americanus
ENSHCOG00000012787	chd1l	94	62.077	ENSUMAG00000009733	CHD1L	96	62.322	Ursus_maritimus
ENSHCOG00000012787	chd1l	92	62.963	ENSVVUG00000007316	CHD1L	89	62.485	Vulpes_vulpes
ENSHCOG00000012787	chd1l	94	72.465	ENSXCOG00000008336	chd1l	85	72.465	Xiphophorus_couchianus
ENSHCOG00000012787	chd1l	94	73.963	ENSXMAG00000015898	chd1l	96	70.567	Xiphophorus_maculatus