EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012825 (Gene tree)
Gene ID: 109527530
Gene Symbol: -
Alias: -
Full Name: aly/REF export factor 2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10014 bases
Position: chrKV880294.1:5807066-5817079
Accession: 109527530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023931	RRM_1	PF00076.22	4.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016626	-	885	XM_019889521	ENSHCOP00000023931	258 (aa)	XP_019745080	-

Gene Model

Click here to download ENSHCOG00000012825's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG
hcq03015	mRNA surveillance pathway	KEGG
hcq03040	Spliceosome	KEGG
hcq05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012825	-	94	49.248	ENSHCOG00000015046	ALYREF	98	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012825	-	95	62.400	ENSAPOG00000000183	-	98	67.063	Acanthochromis_polyacanthus
ENSHCOG00000012825	-	95	53.184	ENSACIG00000020351	-	100	54.152	Amphilophus_citrinellus
ENSHCOG00000012825	-	95	46.125	ENSACIG00000006351	alyref	97	48.897	Amphilophus_citrinellus
ENSHCOG00000012825	-	95	62.000	ENSAOCG00000019305	-	98	67.600	Amphiprion_ocellaris
ENSHCOG00000012825	-	94	47.955	ENSAOCG00000014012	alyref	98	49.630	Amphiprion_ocellaris
ENSHCOG00000012825	-	95	61.600	ENSAPEG00000013527	-	98	67.600	Amphiprion_percula
ENSHCOG00000012825	-	99	46.454	ENSAPEG00000014603	alyref	100	48.057	Amphiprion_percula
ENSHCOG00000012825	-	94	46.182	ENSATEG00000004307	alyref	98	49.091	Anabas_testudineus
ENSHCOG00000012825	-	95	64.981	ENSATEG00000000382	-	98	64.981	Anabas_testudineus
ENSHCOG00000012825	-	54	58.156	ENSAPLG00000014745	-	100	59.574	Anas_platyrhynchos
ENSHCOG00000012825	-	94	60.311	ENSACLG00000010184	-	98	61.538	Astatotilapia_calliptera
ENSHCOG00000012825	-	94	45.522	ENSACLG00000008432	alyref	98	48.339	Astatotilapia_calliptera
ENSHCOG00000012825	-	97	45.263	ENSAMXG00000007359	alyref	98	48.029	Astyanax_mexicanus
ENSHCOG00000012825	-	64	44.751	ENSCING00000013568	-	98	42.424	Ciona_intestinalis
ENSHCOG00000012825	-	64	46.369	ENSCSAVG00000003324	-	98	44.358	Ciona_savignyi
ENSHCOG00000012825	-	94	48.689	ENSCSEG00000017800	alyref	98	49.438	Cynoglossus_semilaevis
ENSHCOG00000012825	-	94	57.540	ENSCVAG00000007789	-	97	61.660	Cyprinodon_variegatus
ENSHCOG00000012825	-	94	47.566	ENSCVAG00000014869	alyref	98	49.446	Cyprinodon_variegatus
ENSHCOG00000012825	-	96	45.455	ENSDARG00000077732	alyref	98	49.640	Danio_rerio
ENSHCOG00000012825	-	93	39.928	FBgn0010774	Ref1	98	39.114	Drosophila_melanogaster
ENSHCOG00000012825	-	94	43.952	ENSEBUG00000006305	alyref	98	44.758	Eptatretus_burgeri
ENSHCOG00000012825	-	95	44.776	ENSEBUG00000008253	alyref	99	41.608	Eptatretus_burgeri
ENSHCOG00000012825	-	94	49.077	ENSELUG00000017178	alyref	99	49.821	Esox_lucius
ENSHCOG00000012825	-	95	53.725	ENSELUG00000008849	-	100	54.475	Esox_lucius
ENSHCOG00000012825	-	62	60.494	ENSFALG00000011923	-	98	58.084	Ficedula_albicollis
ENSHCOG00000012825	-	94	64.286	ENSFHEG00000004698	-	97	62.698	Fundulus_heteroclitus
ENSHCOG00000012825	-	94	47.955	ENSFHEG00000019426	alyref	98	47.857	Fundulus_heteroclitus
ENSHCOG00000012825	-	72	64.921	ENSGMOG00000013122	-	99	64.921	Gadus_morhua
ENSHCOG00000012825	-	94	46.792	ENSGMOG00000009882	alyref	98	45.683	Gadus_morhua
ENSHCOG00000012825	-	94	47.619	ENSGAFG00000006014	alyref	98	46.643	Gambusia_affinis
ENSHCOG00000012825	-	95	58.431	ENSGAFG00000007573	-	98	58.431	Gambusia_affinis
ENSHCOG00000012825	-	94	59.615	ENSHBUG00000001454	-	98	60.223	Haplochromis_burtoni
ENSHCOG00000012825	-	94	45.522	ENSHBUG00000020196	alyref	98	48.339	Haplochromis_burtoni
ENSHCOG00000012825	-	97	48.399	ENSIPUG00000009469	alyref	100	50.179	Ictalurus_punctatus
ENSHCOG00000012825	-	76	49.500	ENSSTOG00000016570	-	96	49.505	Ictidomys_tridecemlineatus
ENSHCOG00000012825	-	95	60.000	ENSKMAG00000006462	-	98	62.205	Kryptolebias_marmoratus
ENSHCOG00000012825	-	94	48.529	ENSKMAG00000008912	alyref	98	50.368	Kryptolebias_marmoratus
ENSHCOG00000012825	-	95	70.079	ENSLBEG00000012930	-	99	68.379	Labrus_bergylta
ENSHCOG00000012825	-	95	65.918	ENSLBEG00000005387	-	99	65.038	Labrus_bergylta
ENSHCOG00000012825	-	96	50.980	ENSLBEG00000023118	alyref	90	52.157	Labrus_bergylta
ENSHCOG00000012825	-	75	50.754	ENSLOCG00000013879	alyref	82	54.774	Lepisosteus_oculatus
ENSHCOG00000012825	-	95	66.270	ENSMAMG00000005464	-	98	65.079	Mastacembelus_armatus
ENSHCOG00000012825	-	94	49.630	ENSMAMG00000003034	alyref	98	50.741	Mastacembelus_armatus
ENSHCOG00000012825	-	94	59.922	ENSMZEG00005012096	-	98	61.154	Maylandia_zebra
ENSHCOG00000012825	-	94	45.522	ENSMZEG00005008639	alyref	98	48.339	Maylandia_zebra
ENSHCOG00000012825	-	97	54.365	ENSMMOG00000007032	-	100	54.510	Mola_mola
ENSHCOG00000012825	-	96	50.365	ENSMMOG00000012458	alyref	99	50.890	Mola_mola
ENSHCOG00000012825	-	95	63.672	ENSMALG00000006054	-	98	63.672	Monopterus_albus
ENSHCOG00000012825	-	94	42.545	ENSMLUG00000022178	-	98	42.182	Myotis_lucifugus
ENSHCOG00000012825	-	95	44.203	ENSMLUG00000006521	-	99	46.691	Myotis_lucifugus
ENSHCOG00000012825	-	95	46.269	ENSMLUG00000004098	-	99	49.438	Myotis_lucifugus
ENSHCOG00000012825	-	75	50.515	ENSMLUG00000028605	-	99	42.238	Myotis_lucifugus
ENSHCOG00000012825	-	94	45.018	ENSMLUG00000009247	-	98	44.815	Myotis_lucifugus
ENSHCOG00000012825	-	95	43.310	ENSMLUG00000014372	-	99	47.810	Myotis_lucifugus
ENSHCOG00000012825	-	75	50.515	ENSMLUG00000030671	-	98	42.599	Myotis_lucifugus
ENSHCOG00000012825	-	94	42.652	ENSMLUG00000022467	-	99	42.500	Myotis_lucifugus
ENSHCOG00000012825	-	94	52.479	ENSNGAG00000022014	-	98	49.027	Nannospalax_galili
ENSHCOG00000012825	-	94	60.311	ENSNBRG00000017460	-	99	62.162	Neolamprologus_brichardi
ENSHCOG00000012825	-	94	45.556	ENSNBRG00000001747	alyref	98	48.352	Neolamprologus_brichardi
ENSHCOG00000012825	-	94	47.080	ENSONIG00000019434	alyref	98	47.810	Oreochromis_niloticus
ENSHCOG00000012825	-	94	60.784	ENSONIG00000003296	-	98	62.214	Oreochromis_niloticus
ENSHCOG00000012825	-	95	51.852	ENSORLG00000001620	-	90	50.000	Oryzias_latipes
ENSHCOG00000012825	-	96	46.909	ENSORLG00020011942	alyref	98	48.529	Oryzias_latipes_hni
ENSHCOG00000012825	-	95	63.636	ENSORLG00020015673	-	98	62.846	Oryzias_latipes_hni
ENSHCOG00000012825	-	95	63.241	ENSORLG00015015143	-	98	63.241	Oryzias_latipes_hsok
ENSHCOG00000012825	-	96	47.253	ENSORLG00015022664	alyref	98	48.889	Oryzias_latipes_hsok
ENSHCOG00000012825	-	94	48.708	ENSOMEG00000019176	alyref	98	45.035	Oryzias_melastigma
ENSHCOG00000012825	-	95	59.524	ENSOMEG00000007158	-	98	59.921	Oryzias_melastigma
ENSHCOG00000012825	-	72	55.851	ENSPPAG00000036403	-	68	57.219	Pan_paniscus
ENSHCOG00000012825	-	95	52.308	ENSPKIG00000006233	-	80	49.442	Paramormyrops_kingsleyae
ENSHCOG00000012825	-	94	49.071	ENSPKIG00000007070	alyref	98	49.071	Paramormyrops_kingsleyae
ENSHCOG00000012825	-	99	49.104	ENSPMGG00000016600	alyref	93	49.462	Periophthalmus_magnuspinnatus
ENSHCOG00000012825	-	62	60.123	ENSPMGG00000012994	-	93	60.123	Periophthalmus_magnuspinnatus
ENSHCOG00000012825	-	94	52.893	ENSPEMG00000016628	-	98	50.000	Peromyscus_maniculatus_bairdii
ENSHCOG00000012825	-	94	47.445	ENSPFOG00000022825	alyref	97	49.270	Poecilia_formosa
ENSHCOG00000012825	-	95	57.812	ENSPFOG00000017094	-	98	60.938	Poecilia_formosa
ENSHCOG00000012825	-	94	47.619	ENSPLAG00000006948	alyref	98	49.451	Poecilia_latipinna
ENSHCOG00000012825	-	95	57.812	ENSPLAG00000014380	-	98	60.938	Poecilia_latipinna
ENSHCOG00000012825	-	95	47.464	ENSPMEG00000003547	alyref	98	49.270	Poecilia_mexicana
ENSHCOG00000012825	-	95	57.812	ENSPMEG00000023039	-	98	60.938	Poecilia_mexicana
ENSHCOG00000012825	-	94	48.352	ENSPREG00000015795	alyref	98	50.183	Poecilia_reticulata
ENSHCOG00000012825	-	94	62.451	ENSPREG00000003649	-	98	59.684	Poecilia_reticulata
ENSHCOG00000012825	-	95	58.687	ENSPNYG00000002879	-	98	60.606	Pundamilia_nyererei
ENSHCOG00000012825	-	94	45.522	ENSPNYG00000017498	alyref	98	48.339	Pundamilia_nyererei
ENSHCOG00000012825	-	80	52.632	ENSPNAG00000002531	alyref	98	49.270	Pygocentrus_nattereri
ENSHCOG00000012825	-	86	49.776	ENSSBOG00000030924	-	82	57.297	Saimiri_boliviensis_boliviensis
ENSHCOG00000012825	-	95	46.032	ENSSHAG00000000609	-	99	43.701	Sarcophilus_harrisii
ENSHCOG00000012825	-	95	44.528	ENSSHAG00000012866	-	99	41.026	Sarcophilus_harrisii
ENSHCOG00000012825	-	74	55.897	ENSSFOG00015003923	alyref	73	54.630	Scleropages_formosus
ENSHCOG00000012825	-	73	53.403	ENSSFOG00015003678	alyref	83	56.614	Scleropages_formosus
ENSHCOG00000012825	-	94	47.407	ENSSMAG00000009283	alyref	98	48.529	Scophthalmus_maximus
ENSHCOG00000012825	-	95	69.531	ENSSMAG00000011169	-	98	71.484	Scophthalmus_maximus
ENSHCOG00000012825	-	94	47.955	ENSSDUG00000016158	alyref	98	49.630	Seriola_dumerili
ENSHCOG00000012825	-	94	48.889	ENSSLDG00000017803	alyref	98	49.259	Seriola_lalandi_dorsalis
ENSHCOG00000012825	-	95	65.462	ENSSPAG00000017028	-	96	69.048	Stegastes_partitus
ENSHCOG00000012825	-	95	57.364	ENSTRUG00000003051	-	99	56.202	Takifugu_rubripes
ENSHCOG00000012825	-	94	50.996	ENSTNIG00000011595	alyref	98	50.407	Tetraodon_nigroviridis
ENSHCOG00000012825	-	95	58.730	ENSTNIG00000014136	-	99	55.159	Tetraodon_nigroviridis
ENSHCOG00000012825	-	72	58.289	ENSVVUG00000000272	-	80	57.527	Vulpes_vulpes
ENSHCOG00000012825	-	96	47.122	ENSXCOG00000018047	alyref	99	46.528	Xiphophorus_couchianus
ENSHCOG00000012825	-	95	58.594	ENSXMAG00000018086	-	100	61.328	Xiphophorus_maculatus
ENSHCOG00000012825	-	96	47.122	ENSXMAG00000012218	alyref	99	46.528	Xiphophorus_maculatus