EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000012998 (Gene tree)
Gene ID: -
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: probable RNA-binding protein 46
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8182 bases
Position: chrKV880083.1:266821-275002
Accession: 109520170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000023995	DND1_DSRM	PF14709.7	2.8e-06	1	1
ENSHCOP00000010343	RRM_1	PF00076.22	6.4e-29	1	2
ENSHCOP00000010343	RRM_1	PF00076.22	6.4e-29	2	2
ENSHCOP00000023995	RRM_1	PF00076.22	1.4e-28	1	2
ENSHCOP00000023995	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000016736	-	1110	-	ENSHCOP00000010343	369 (aa)	-	-
ENSHCOT00000016756	-	1398	XM_019877186	ENSHCOP00000023995	465 (aa)	XP_019732745	-

Gene Model

Click here to download ENSHCOG00000012998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000012998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000012998	rbm46	53	36.548	ENSHCOG00000019493	dnd1	51	36.548
ENSHCOG00000012998	rbm46	84	52.665	ENSHCOG00000002074	rbm47	56	54.125
ENSHCOG00000012998	rbm46	80	46.078	ENSHCOG00000001582	hnrnpr	52	45.312
ENSHCOG00000012998	rbm46	80	46.405	ENSHCOG00000014547	syncripl	58	45.625
ENSHCOG00000012998	rbm46	75	51.568	ENSHCOG00000017669	a1cf	51	49.518
ENSHCOG00000012998	rbm46	85	44.615	ENSHCOG00000008764	syncrip	59	44.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000012998	rbm46	94	50.420	ENSG00000151962	RBM46	95	67.717	Homo_sapiens
ENSHCOG00000012998	rbm46	88	54.036	ENSAPOG00000009209	rbm46	88	54.484	Acanthochromis_polyacanthus
ENSHCOG00000012998	rbm46	90	52.088	ENSAMEG00000013290	RBM46	85	52.088	Ailuropoda_melanoleuca
ENSHCOG00000012998	rbm46	88	55.378	ENSACIG00000014500	rbm46	86	55.378	Amphilophus_citrinellus
ENSHCOG00000012998	rbm46	87	56.190	ENSAOCG00000001892	-	85	56.190	Amphiprion_ocellaris
ENSHCOG00000012998	rbm46	87	56.190	ENSAPEG00000017762	rbm46	95	56.190	Amphiprion_percula
ENSHCOG00000012998	rbm46	92	55.856	ENSATEG00000010775	rbm46	87	55.856	Anabas_testudineus
ENSHCOG00000012998	rbm46	90	50.552	ENSAPLG00000005116	RBM46	97	50.552	Anas_platyrhynchos
ENSHCOG00000012998	rbm46	82	59.486	ENSACAG00000015599	RBM46	84	51.487	Anolis_carolinensis
ENSHCOG00000012998	rbm46	94	50.630	ENSANAG00000029193	RBM46	98	50.630	Aotus_nancymaae
ENSHCOG00000012998	rbm46	94	52.411	ENSACLG00000016153	rbm46	83	52.778	Astatotilapia_calliptera
ENSHCOG00000012998	rbm46	88	52.927	ENSAMXG00000009397	rbm46	96	52.927	Astyanax_mexicanus
ENSHCOG00000012998	rbm46	80	57.237	ENSAMXG00000020892	-	86	48.889	Astyanax_mexicanus
ENSHCOG00000012998	rbm46	94	51.050	ENSBTAG00000001696	RBM46	98	51.050	Bos_taurus
ENSHCOG00000012998	rbm46	94	50.418	ENSCJAG00000001768	RBM46	98	49.585	Callithrix_jacchus
ENSHCOG00000012998	rbm46	94	51.261	ENSCAFG00000008473	RBM46	98	51.261	Canis_familiaris
ENSHCOG00000012998	rbm46	93	51.717	ENSCAFG00020002468	RBM46	94	51.717	Canis_lupus_dingo
ENSHCOG00000012998	rbm46	94	51.050	ENSCHIG00000000502	RBM46	98	51.050	Capra_hircus
ENSHCOG00000012998	rbm46	94	50.840	ENSTSYG00000010435	RBM46	98	50.840	Carlito_syrichta
ENSHCOG00000012998	rbm46	94	50.420	ENSCAPG00000011928	-	98	50.420	Cavia_aperea
ENSHCOG00000012998	rbm46	78	59.797	ENSCAPG00000011841	-	81	59.603	Cavia_aperea
ENSHCOG00000012998	rbm46	94	50.420	ENSCPOG00000010284	-	98	50.420	Cavia_porcellus
ENSHCOG00000012998	rbm46	90	51.096	ENSCPOG00000020396	-	92	50.649	Cavia_porcellus
ENSHCOG00000012998	rbm46	93	50.533	ENSCPOG00000019272	-	87	50.533	Cavia_porcellus
ENSHCOG00000012998	rbm46	93	42.918	ENSCCAG00000001323	-	97	42.918	Cebus_capucinus
ENSHCOG00000012998	rbm46	94	50.420	ENSCCAG00000027619	-	98	50.420	Cebus_capucinus
ENSHCOG00000012998	rbm46	94	50.210	ENSCATG00000040148	RBM46	98	50.210	Cercocebus_atys
ENSHCOG00000012998	rbm46	94	50.630	ENSCLAG00000005846	-	98	50.630	Chinchilla_lanigera
ENSHCOG00000012998	rbm46	89	50.877	ENSCLAG00000011886	-	86	50.877	Chinchilla_lanigera
ENSHCOG00000012998	rbm46	90	51.435	ENSCSAG00000003263	RBM46	85	51.435	Chlorocebus_sabaeus
ENSHCOG00000012998	rbm46	90	51.770	ENSCHOG00000003429	RBM46	85	51.770	Choloepus_hoffmanni
ENSHCOG00000012998	rbm46	78	60.678	ENSCPBG00000009314	RBM46	91	52.506	Chrysemys_picta_bellii
ENSHCOG00000012998	rbm46	94	50.420	ENSCANG00000039065	RBM46	98	50.420	Colobus_angolensis_palliatus
ENSHCOG00000012998	rbm46	94	51.261	ENSCGRG00001016714	Rbm46	98	51.261	Cricetulus_griseus_chok1gshd
ENSHCOG00000012998	rbm46	94	51.261	ENSCGRG00000011738	Rbm46	98	51.261	Cricetulus_griseus_crigri
ENSHCOG00000012998	rbm46	90	48.206	ENSCSEG00000005530	rbm46	97	48.098	Cynoglossus_semilaevis
ENSHCOG00000012998	rbm46	88	52.045	ENSCVAG00000021013	rbm46	92	52.273	Cyprinodon_variegatus
ENSHCOG00000012998	rbm46	86	57.846	ENSDARG00000079452	rbm46	87	52.036	Danio_rerio
ENSHCOG00000012998	rbm46	90	51.656	ENSDNOG00000016195	RBM46	85	51.656	Dasypus_novemcinctus
ENSHCOG00000012998	rbm46	94	51.261	ENSDORG00000006405	Rbm46	98	51.261	Dipodomys_ordii
ENSHCOG00000012998	rbm46	90	52.097	ENSETEG00000014902	RBM46	85	52.097	Echinops_telfairi
ENSHCOG00000012998	rbm46	90	52.318	ENSEASG00005015821	RBM46	85	52.318	Equus_asinus_asinus
ENSHCOG00000012998	rbm46	94	51.261	ENSECAG00000007649	RBM46	98	51.261	Equus_caballus
ENSHCOG00000012998	rbm46	90	50.552	ENSEEUG00000011824	RBM46	85	50.552	Erinaceus_europaeus
ENSHCOG00000012998	rbm46	86	56.402	ENSELUG00000008166	rbm46	94	54.645	Esox_lucius
ENSHCOG00000012998	rbm46	94	51.046	ENSFCAG00000029812	RBM46	97	52.088	Felis_catus
ENSHCOG00000012998	rbm46	91	48.608	ENSFALG00000013157	RBM46	94	47.609	Ficedula_albicollis
ENSHCOG00000012998	rbm46	93	49.359	ENSFDAG00000019281	-	87	48.718	Fukomys_damarensis
ENSHCOG00000012998	rbm46	88	51.810	ENSFDAG00000006445	-	89	51.339	Fukomys_damarensis
ENSHCOG00000012998	rbm46	74	59.220	ENSFHEG00000013257	rbm46	88	53.213	Fundulus_heteroclitus
ENSHCOG00000012998	rbm46	75	58.099	ENSGALG00000009278	RBM46	93	48.064	Gallus_gallus
ENSHCOG00000012998	rbm46	81	60.897	ENSGAFG00000020245	rbm46	73	61.270	Gambusia_affinis
ENSHCOG00000012998	rbm46	50	69.945	ENSGACG00000000381	rbm46	98	69.945	Gasterosteus_aculeatus
ENSHCOG00000012998	rbm46	93	50.215	ENSGAGG00000002019	RBM46	88	50.215	Gopherus_agassizii
ENSHCOG00000012998	rbm46	94	50.420	ENSGGOG00000001876	RBM46	98	50.420	Gorilla_gorilla
ENSHCOG00000012998	rbm46	92	54.023	ENSHBUG00000009609	rbm46	96	53.759	Haplochromis_burtoni
ENSHCOG00000012998	rbm46	96	43.590	ENSHGLG00000002940	-	91	43.590	Heterocephalus_glaber_female
ENSHCOG00000012998	rbm46	93	50.110	ENSHGLG00000002463	-	96	52.494	Heterocephalus_glaber_female
ENSHCOG00000012998	rbm46	88	46.336	ENSHGLG00000010742	-	84	47.045	Heterocephalus_glaber_female
ENSHCOG00000012998	rbm46	94	49.372	ENSHGLG00100012752	-	98	49.372	Heterocephalus_glaber_male
ENSHCOG00000012998	rbm46	96	43.011	ENSHGLG00100018987	-	91	43.011	Heterocephalus_glaber_male
ENSHCOG00000012998	rbm46	88	46.336	ENSHGLG00100004977	-	84	47.045	Heterocephalus_glaber_male
ENSHCOG00000012998	rbm46	87	49.227	ENSIPUG00000024038	rbm46	93	49.455	Ictalurus_punctatus
ENSHCOG00000012998	rbm46	94	51.261	ENSSTOG00000007918	RBM46	98	51.261	Ictidomys_tridecemlineatus
ENSHCOG00000012998	rbm46	91	51.828	ENSJJAG00000003902	Rbm46	97	51.380	Jaculus_jaculus
ENSHCOG00000012998	rbm46	89	54.756	ENSKMAG00000015127	rbm46	85	54.756	Kryptolebias_marmoratus
ENSHCOG00000012998	rbm46	82	59.105	ENSLACG00000002062	RBM46	84	50.985	Latimeria_chalumnae
ENSHCOG00000012998	rbm46	81	60.586	ENSLOCG00000008298	rbm46	94	53.333	Lepisosteus_oculatus
ENSHCOG00000012998	rbm46	90	52.318	ENSLAFG00000015448	RBM46	97	52.318	Loxodonta_africana
ENSHCOG00000012998	rbm46	94	50.420	ENSMFAG00000043485	RBM46	98	50.420	Macaca_fascicularis
ENSHCOG00000012998	rbm46	94	50.420	ENSMMUG00000021147	RBM46	98	50.420	Macaca_mulatta
ENSHCOG00000012998	rbm46	94	50.420	ENSMNEG00000002787	RBM46	98	50.420	Macaca_nemestrina
ENSHCOG00000012998	rbm46	94	50.210	ENSMLEG00000029756	RBM46	98	50.210	Mandrillus_leucophaeus
ENSHCOG00000012998	rbm46	90	56.278	ENSMAMG00000009093	rbm46	89	56.278	Mastacembelus_armatus
ENSHCOG00000012998	rbm46	89	54.195	ENSMZEG00005027849	rbm46	92	54.607	Maylandia_zebra
ENSHCOG00000012998	rbm46	85	47.806	ENSMGAG00000001457	RBM46	93	48.064	Meleagris_gallopavo
ENSHCOG00000012998	rbm46	94	51.261	ENSMAUG00000009911	Rbm46	98	51.261	Mesocricetus_auratus
ENSHCOG00000012998	rbm46	94	51.261	ENSMICG00000042747	RBM46	98	51.261	Microcebus_murinus
ENSHCOG00000012998	rbm46	94	51.261	ENSMOCG00000001188	Rbm46	98	51.261	Microtus_ochrogaster
ENSHCOG00000012998	rbm46	92	53.305	ENSMMOG00000011214	rbm46	89	53.305	Mola_mola
ENSHCOG00000012998	rbm46	90	51.656	ENSMODG00000001302	RBM46	78	51.656	Monodelphis_domestica
ENSHCOG00000012998	rbm46	88	58.859	ENSMALG00000006185	rbm46	90	56.308	Monopterus_albus
ENSHCOG00000012998	rbm46	94	51.261	MGP_CAROLIEiJ_G0025101	Rbm46	98	51.261	Mus_caroli
ENSHCOG00000012998	rbm46	94	51.261	ENSMUSG00000033882	Rbm46	98	51.261	Mus_musculus
ENSHCOG00000012998	rbm46	94	50.630	MGP_PahariEiJ_G0026544	Rbm46	98	50.630	Mus_pahari
ENSHCOG00000012998	rbm46	94	51.471	MGP_SPRETEiJ_G0026043	Rbm46	98	51.471	Mus_spretus
ENSHCOG00000012998	rbm46	94	51.261	ENSMPUG00000005670	RBM46	98	51.261	Mustela_putorius_furo
ENSHCOG00000012998	rbm46	90	52.203	ENSMLUG00000003221	RBM46	85	52.203	Myotis_lucifugus
ENSHCOG00000012998	rbm46	94	51.050	ENSNGAG00000004231	Rbm46	98	51.050	Nannospalax_galili
ENSHCOG00000012998	rbm46	92	54.402	ENSNBRG00000000273	rbm46	87	54.402	Neolamprologus_brichardi
ENSHCOG00000012998	rbm46	94	50.420	ENSNLEG00000006184	RBM46	98	50.420	Nomascus_leucogenys
ENSHCOG00000012998	rbm46	81	50.971	ENSMEUG00000013328	RBM46	99	50.971	Notamacropus_eugenii
ENSHCOG00000012998	rbm46	72	58.759	ENSOPRG00000007136	RBM46	97	60.440	Ochotona_princeps
ENSHCOG00000012998	rbm46	88	51.131	ENSODEG00000018002	-	89	50.108	Octodon_degus
ENSHCOG00000012998	rbm46	94	50.420	ENSODEG00000000735	-	98	50.420	Octodon_degus
ENSHCOG00000012998	rbm46	88	51.794	ENSONIG00000014096	rbm46	95	52.915	Oreochromis_niloticus
ENSHCOG00000012998	rbm46	97	48.776	ENSOANG00000002141	RBM46	97	48.776	Ornithorhynchus_anatinus
ENSHCOG00000012998	rbm46	90	52.318	ENSOCUG00000017859	RBM46	85	52.318	Oryctolagus_cuniculus
ENSHCOG00000012998	rbm46	89	54.779	ENSORLG00000002429	rbm46	89	55.711	Oryzias_latipes
ENSHCOG00000012998	rbm46	91	52.826	ENSORLG00020022154	rbm46	82	53.880	Oryzias_latipes_hni
ENSHCOG00000012998	rbm46	92	52.258	ENSORLG00015020234	rbm46	92	53.407	Oryzias_latipes_hsok
ENSHCOG00000012998	rbm46	87	55.079	ENSOMEG00000022580	rbm46	85	55.982	Oryzias_melastigma
ENSHCOG00000012998	rbm46	90	52.318	ENSOGAG00000005647	RBM46	85	52.318	Otolemur_garnettii
ENSHCOG00000012998	rbm46	94	51.050	ENSOARG00000016406	RBM46	98	51.050	Ovis_aries
ENSHCOG00000012998	rbm46	94	50.420	ENSPPAG00000043236	RBM46	98	50.420	Pan_paniscus
ENSHCOG00000012998	rbm46	94	50.837	ENSPPRG00000009416	RBM46	97	51.868	Panthera_pardus
ENSHCOG00000012998	rbm46	94	50.837	ENSPTIG00000017449	RBM46	97	51.868	Panthera_tigris_altaica
ENSHCOG00000012998	rbm46	94	50.420	ENSPTRG00000016538	RBM46	98	50.420	Pan_troglodytes
ENSHCOG00000012998	rbm46	94	50.420	ENSPANG00000004186	RBM46	98	50.420	Papio_anubis
ENSHCOG00000012998	rbm46	82	56.270	ENSPKIG00000015334	rbm46	77	49.539	Paramormyrops_kingsleyae
ENSHCOG00000012998	rbm46	82	58.842	ENSPSIG00000006429	RBM46	92	50.773	Pelodiscus_sinensis
ENSHCOG00000012998	rbm46	88	52.482	ENSPMGG00000019872	rbm46	91	52.482	Periophthalmus_magnuspinnatus
ENSHCOG00000012998	rbm46	94	51.261	ENSPEMG00000013899	Rbm46	98	51.261	Peromyscus_maniculatus_bairdii
ENSHCOG00000012998	rbm46	94	50.840	ENSPCIG00000029626	RBM46	98	50.840	Phascolarctos_cinereus
ENSHCOG00000012998	rbm46	89	56.216	ENSPFOG00000001079	rbm46	95	56.216	Poecilia_formosa
ENSHCOG00000012998	rbm46	92	54.585	ENSPLAG00000004541	rbm46	79	55.856	Poecilia_latipinna
ENSHCOG00000012998	rbm46	92	54.585	ENSPMEG00000015724	rbm46	91	56.148	Poecilia_mexicana
ENSHCOG00000012998	rbm46	93	54.447	ENSPREG00000014464	rbm46	99	54.447	Poecilia_reticulata
ENSHCOG00000012998	rbm46	90	51.435	ENSPPYG00000015144	RBM46	85	51.435	Pongo_abelii
ENSHCOG00000012998	rbm46	90	48.124	ENSPCAG00000003110	RBM46	85	48.565	Procavia_capensis
ENSHCOG00000012998	rbm46	94	50.628	ENSPCOG00000024347	RBM46	97	51.648	Propithecus_coquereli
ENSHCOG00000012998	rbm46	90	52.318	ENSPVAG00000008376	RBM46	85	52.318	Pteropus_vampyrus
ENSHCOG00000012998	rbm46	88	51.225	ENSPNAG00000025312	rbm46	86	51.225	Pygocentrus_nattereri
ENSHCOG00000012998	rbm46	90	52.318	ENSRNOG00000025823	Rbm46	85	52.318	Rattus_norvegicus
ENSHCOG00000012998	rbm46	94	49.583	ENSRBIG00000032583	RBM46	98	49.583	Rhinopithecus_bieti
ENSHCOG00000012998	rbm46	94	49.583	ENSRROG00000044288	RBM46	98	49.583	Rhinopithecus_roxellana
ENSHCOG00000012998	rbm46	94	50.420	ENSSBOG00000033028	RBM46	98	50.420	Saimiri_boliviensis_boliviensis
ENSHCOG00000012998	rbm46	90	51.656	ENSSHAG00000012596	RBM46	85	51.656	Sarcophilus_harrisii
ENSHCOG00000012998	rbm46	88	50.691	ENSSFOG00015000087	rbm46	84	50.922	Scleropages_formosus
ENSHCOG00000012998	rbm46	88	53.901	ENSSMAG00000017042	rbm46	92	53.505	Scophthalmus_maximus
ENSHCOG00000012998	rbm46	92	55.188	ENSSDUG00000020645	rbm46	90	55.357	Seriola_dumerili
ENSHCOG00000012998	rbm46	90	52.318	ENSSARG00000006520	RBM46	85	52.318	Sorex_araneus
ENSHCOG00000012998	rbm46	93	50.000	ENSSPUG00000004773	-	96	50.433	Sphenodon_punctatus
ENSHCOG00000012998	rbm46	92	50.433	ENSSPUG00000012525	-	86	50.433	Sphenodon_punctatus
ENSHCOG00000012998	rbm46	89	54.779	ENSSPAG00000013697	rbm46	94	54.779	Stegastes_partitus
ENSHCOG00000012998	rbm46	94	51.261	ENSSSCG00000008994	RBM46	98	51.261	Sus_scrofa
ENSHCOG00000012998	rbm46	87	50.227	ENSTGUG00000005307	RBM46	94	50.682	Taeniopygia_guttata
ENSHCOG00000012998	rbm46	92	52.500	ENSTRUG00000004237	rbm46	92	52.500	Takifugu_rubripes
ENSHCOG00000012998	rbm46	89	52.018	ENSTNIG00000008714	rbm46	88	50.644	Tetraodon_nigroviridis
ENSHCOG00000012998	rbm46	90	51.106	ENSTBEG00000013949	RBM46	85	51.106	Tupaia_belangeri
ENSHCOG00000012998	rbm46	90	51.435	ENSTTRG00000001239	RBM46	85	51.435	Tursiops_truncatus
ENSHCOG00000012998	rbm46	94	51.261	ENSUAMG00000026593	RBM46	98	51.261	Ursus_americanus
ENSHCOG00000012998	rbm46	94	51.261	ENSUMAG00000016442	RBM46	98	51.261	Ursus_maritimus
ENSHCOG00000012998	rbm46	94	51.261	ENSVVUG00000024957	RBM46	98	52.174	Vulpes_vulpes
ENSHCOG00000012998	rbm46	82	49.196	ENSXETG00000032067	-	84	51.768	Xenopus_tropicalis
ENSHCOG00000012998	rbm46	90	49.224	ENSXETG00000022412	-	85	49.224	Xenopus_tropicalis
ENSHCOG00000012998	rbm46	90	33.913	ENSXETG00000032344	-	85	33.913	Xenopus_tropicalis
ENSHCOG00000012998	rbm46	88	54.525	ENSXMAG00000008237	rbm46	89	54.525	Xiphophorus_maculatus