EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000013161 (Gene tree)
Gene ID: 109517544
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3342 bases
Position: chrKV880004.1:14047-17388
Accession: 109517544
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010534	Ribosomal_S18	PF01084.20	8.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026230	-	2173	XM_019872763	ENSHCOP00000010534	132 (aa)	XP_019728322	UPI00094F2C82

Gene Model

Click here to download ENSHCOG00000013161's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013161	mrps18c	100	66.667	ENSAPOG00000019045	mrps18c	100	66.667	Acanthochromis_polyacanthus
ENSHCOG00000013161	mrps18c	71	76.596	ENSACIG00000020253	mrps18c	93	76.596	Amphilophus_citrinellus
ENSHCOG00000013161	mrps18c	70	80.435	ENSAOCG00000014338	mrps18c	71	80.435	Amphiprion_ocellaris
ENSHCOG00000013161	mrps18c	73	77.083	ENSAPEG00000022956	mrps18c	74	77.083	Amphiprion_percula
ENSHCOG00000013161	mrps18c	66	82.759	ENSAPEG00000023068	-	82	82.759	Amphiprion_percula
ENSHCOG00000013161	mrps18c	100	63.636	ENSATEG00000023417	mrps18c	100	63.636	Anabas_testudineus
ENSHCOG00000013161	mrps18c	67	64.045	ENSAPLG00000012544	-	86	64.045	Anas_platyrhynchos
ENSHCOG00000013161	mrps18c	70	82.609	ENSACLG00000010521	mrps18c	90	82.609	Astatotilapia_calliptera
ENSHCOG00000013161	mrps18c	69	78.022	ENSAMXG00000012238	mrps18c	92	78.022	Astyanax_mexicanus
ENSHCOG00000013161	mrps18c	67	67.416	ENSCPBG00000007783	-	55	67.416	Chrysemys_picta_bellii
ENSHCOG00000013161	mrps18c	67	83.146	ENSCSEG00000000711	mrps18c	63	83.146	Cynoglossus_semilaevis
ENSHCOG00000013161	mrps18c	88	69.828	ENSCVAG00000020169	mrps18c	88	69.828	Cyprinodon_variegatus
ENSHCOG00000013161	mrps18c	98	60.448	ENSDARG00000069624	mrps18c	99	60.448	Danio_rerio
ENSHCOG00000013161	mrps18c	100	59.259	ENSELUG00000024603	mrps18c	100	59.259	Esox_lucius
ENSHCOG00000013161	mrps18c	88	68.103	ENSFHEG00000018752	-	88	68.103	Fundulus_heteroclitus
ENSHCOG00000013161	mrps18c	88	68.103	ENSFHEG00000015550	mrps18c	84	68.103	Fundulus_heteroclitus
ENSHCOG00000013161	mrps18c	67	65.169	ENSGALG00000023191	MRPS18C	62	65.169	Gallus_gallus
ENSHCOG00000013161	mrps18c	82	71.296	ENSGAFG00000008048	mrps18c	68	71.296	Gambusia_affinis
ENSHCOG00000013161	mrps18c	94	55.039	ENSGAGG00000015144	-	91	55.039	Gopherus_agassizii
ENSHCOG00000013161	mrps18c	83	71.171	ENSHBUG00000002008	mrps18c	85	71.171	Haplochromis_burtoni
ENSHCOG00000013161	mrps18c	69	72.527	ENSIPUG00000003783	mrps18c	88	72.527	Ictalurus_punctatus
ENSHCOG00000013161	mrps18c	95	68.800	ENSKMAG00000016467	mrps18c	94	68.800	Kryptolebias_marmoratus
ENSHCOG00000013161	mrps18c	83	73.394	ENSLBEG00000021861	mrps18c	81	73.394	Labrus_bergylta
ENSHCOG00000013161	mrps18c	83	73.394	ENSLBEG00000019174	mrps18c	81	73.394	Labrus_bergylta
ENSHCOG00000013161	mrps18c	67	71.591	ENSLACG00000011243	mrps18c	69	71.591	Latimeria_chalumnae
ENSHCOG00000013161	mrps18c	69	73.626	ENSLOCG00000012115	mrps18c	67	73.626	Lepisosteus_oculatus
ENSHCOG00000013161	mrps18c	86	69.027	ENSMAMG00000012386	mrps18c	81	69.027	Mastacembelus_armatus
ENSHCOG00000013161	mrps18c	83	71.171	ENSMZEG00005023278	mrps18c	85	71.171	Maylandia_zebra
ENSHCOG00000013161	mrps18c	70	85.870	ENSMMOG00000011316	mrps18c	70	85.870	Mola_mola
ENSHCOG00000013161	mrps18c	83	71.171	ENSNBRG00000006182	mrps18c	85	71.171	Neolamprologus_brichardi
ENSHCOG00000013161	mrps18c	67	69.663	ENSMEUG00000010972	-	70	69.663	Notamacropus_eugenii
ENSHCOG00000013161	mrps18c	70	80.435	ENSONIG00000012527	mrps18c	91	80.435	Oreochromis_niloticus
ENSHCOG00000013161	mrps18c	89	64.957	ENSORLG00015006869	mrps18c	88	64.957	Oryzias_latipes_hsok
ENSHCOG00000013161	mrps18c	67	76.404	ENSOMEG00000005009	mrps18c	86	76.404	Oryzias_melastigma
ENSHCOG00000013161	mrps18c	69	79.121	ENSPKIG00000021736	mrps18c	66	79.121	Paramormyrops_kingsleyae
ENSHCOG00000013161	mrps18c	71	77.660	ENSPMGG00000002991	mrps18c	95	77.660	Periophthalmus_magnuspinnatus
ENSHCOG00000013161	mrps18c	82	69.444	ENSPFOG00000002351	mrps18c	68	69.444	Poecilia_formosa
ENSHCOG00000013161	mrps18c	82	69.444	ENSPLAG00000015187	mrps18c	82	69.444	Poecilia_latipinna
ENSHCOG00000013161	mrps18c	82	69.444	ENSPMEG00000014488	mrps18c	68	69.444	Poecilia_mexicana
ENSHCOG00000013161	mrps18c	63	81.928	ENSPREG00000012593	mrps18c	85	81.928	Poecilia_reticulata
ENSHCOG00000013161	mrps18c	83	70.270	ENSPNYG00000010654	mrps18c	85	70.270	Pundamilia_nyererei
ENSHCOG00000013161	mrps18c	100	55.714	ENSPNAG00000009350	mrps18c	90	71.875	Pygocentrus_nattereri
ENSHCOG00000013161	mrps18c	69	76.923	ENSSFOG00015019444	mrps18c	67	76.923	Scleropages_formosus
ENSHCOG00000013161	mrps18c	83	74.312	ENSSDUG00000015676	mrps18c	85	74.312	Seriola_dumerili
ENSHCOG00000013161	mrps18c	70	83.696	ENSSLDG00000002034	mrps18c	71	83.696	Seriola_lalandi_dorsalis
ENSHCOG00000013161	mrps18c	66	67.816	ENSSPUG00000013990	-	64	67.816	Sphenodon_punctatus
ENSHCOG00000013161	mrps18c	72	71.579	ENSSPAG00000008687	mrps18c	74	71.579	Stegastes_partitus
ENSHCOG00000013161	mrps18c	91	61.600	ENSTRUG00000024403	mrps18c	96	61.600	Takifugu_rubripes
ENSHCOG00000013161	mrps18c	91	64.000	ENSTNIG00000005674	mrps18c	96	64.000	Tetraodon_nigroviridis
ENSHCOG00000013161	mrps18c	70	68.817	ENSXETG00000027597	mrps18c	71	68.817	Xenopus_tropicalis
ENSHCOG00000013161	mrps18c	90	65.546	ENSXCOG00000016208	mrps18c	89	80.899	Xiphophorus_couchianus
ENSHCOG00000013161	mrps18c	82	71.296	ENSXMAG00000012555	mrps18c	68	71.296	Xiphophorus_maculatus