EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000013223 (Gene tree)
Gene ID: 109508324
Gene Symbol: matr3l1.1
Alias: matr3l|si:bz1d10.2|wu:fb78d04|wu:fc09f04|wu:fe36a04
Full Name: matrin-3-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7783 bases
Position: chrKV880522.1:278635-286417
Accession: 109508324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010594	RRM_5	PF13893.6	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026250	-	5259	XM_019858222	ENSHCOP00000010594	1070 (aa)	XP_019713781	-

Gene Model

Click here to download ENSHCOG00000013223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013223	matr3l1.1	83	30.717	ENSG00000015479	MATR3	100	38.211	Homo_sapiens
ENSHCOG00000013223	matr3l1.1	90	34.387	ENSAMEG00000011347	-	58	49.057	Ailuropoda_melanoleuca
ENSHCOG00000013223	matr3l1.1	81	53.704	ENSACAG00000016233	-	59	52.830	Anolis_carolinensis
ENSHCOG00000013223	matr3l1.1	73	48.077	ENSANAG00000022951	-	57	47.059	Aotus_nancymaae
ENSHCOG00000013223	matr3l1.1	63	58.947	ENSACLG00000015903	matr3l1.1	58	66.809	Astatotilapia_calliptera
ENSHCOG00000013223	matr3l1.1	75	34.387	ENSBTAG00000006756	MATR3	55	37.222	Bos_taurus
ENSHCOG00000013223	matr3l1.1	74	50.000	ENSCJAG00000006888	-	58	49.057	Callithrix_jacchus
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSCAFG00000001345	MATR3	60	49.057	Canis_familiaris
ENSHCOG00000013223	matr3l1.1	90	33.466	ENSCAFG00020010504	-	60	47.059	Canis_lupus_dingo
ENSHCOG00000013223	matr3l1.1	83	31.306	ENSCHIG00000025746	-	55	38.636	Capra_hircus
ENSHCOG00000013223	matr3l1.1	80	30.269	ENSTSYG00000011028	-	59	37.222	Carlito_syrichta
ENSHCOG00000013223	matr3l1.1	83	31.166	ENSCPOG00000014076	-	55	37.222	Cavia_porcellus
ENSHCOG00000013223	matr3l1.1	83	30.269	ENSCCAG00000025074	-	55	37.222	Cebus_capucinus
ENSHCOG00000013223	matr3l1.1	83	31.320	ENSCLAG00000015998	-	55	37.222	Chinchilla_lanigera
ENSHCOG00000013223	matr3l1.1	83	30.269	ENSCSAG00000013075	-	55	37.222	Chlorocebus_sabaeus
ENSHCOG00000013223	matr3l1.1	74	55.556	ENSCPBG00000006303	-	57	54.717	Chrysemys_picta_bellii
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSCANG00000028224	-	58	49.057	Colobus_angolensis_palliatus
ENSHCOG00000013223	matr3l1.1	83	30.631	ENSCGRG00001020227	Matr3	55	37.222	Cricetulus_griseus_chok1gshd
ENSHCOG00000013223	matr3l1.1	83	30.631	ENSCGRG00000011298	Matr3	55	37.222	Cricetulus_griseus_crigri
ENSHCOG00000013223	matr3l1.1	99	48.456	ENSCSEG00000012682	matr3l1.1	80	50.879	Cynoglossus_semilaevis
ENSHCOG00000013223	matr3l1.1	99	49.097	ENSCVAG00000005337	matr3l1.1	80	52.941	Cyprinodon_variegatus
ENSHCOG00000013223	matr3l1.1	90	34.118	ENSDNOG00000037723	-	65	50.943	Dasypus_novemcinctus
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSEASG00005020857	-	55	37.222	Equus_asinus_asinus
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSECAG00000012882	MATR3	55	37.222	Equus_caballus
ENSHCOG00000013223	matr3l1.1	77	48.485	ENSELUG00000021651	si:ch211-271b14.1	87	41.667	Esox_lucius
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSFCAG00000021911	-	55	37.222	Felis_catus
ENSHCOG00000013223	matr3l1.1	59	55.556	ENSFALG00000003071	-	57	54.717	Ficedula_albicollis
ENSHCOG00000013223	matr3l1.1	80	30.787	ENSFDAG00000017675	-	63	37.222	Fukomys_damarensis
ENSHCOG00000013223	matr3l1.1	82	35.912	ENSGAGG00000011386	-	57	54.717	Gopherus_agassizii
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSGGOG00000007308	-	61	49.057	Gorilla_gorilla
ENSHCOG00000013223	matr3l1.1	83	30.942	ENSHGLG00000004673	MATR3	55	37.222	Heterocephalus_glaber_female
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSSTOG00000014746	-	55	37.222	Ictidomys_tridecemlineatus
ENSHCOG00000013223	matr3l1.1	84	31.136	ENSJJAG00000021710	-	57	37.222	Jaculus_jaculus
ENSHCOG00000013223	matr3l1.1	50	48.250	ENSLBEG00000018267	matr3l1.1	90	74.138	Labrus_bergylta
ENSHCOG00000013223	matr3l1.1	80	37.853	ENSLACG00000006743	-	59	45.312	Latimeria_chalumnae
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSMFAG00000000634	-	58	49.057	Macaca_fascicularis
ENSHCOG00000013223	matr3l1.1	54	37.222	ENSMMUG00000015963	-	91	37.222	Macaca_mulatta
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSMMUG00000016741	MATR3	58	49.057	Macaca_mulatta
ENSHCOG00000013223	matr3l1.1	89	32.941	ENSMNEG00000042856	-	58	49.057	Macaca_nemestrina
ENSHCOG00000013223	matr3l1.1	89	32.941	ENSMLEG00000041178	-	58	49.057	Mandrillus_leucophaeus
ENSHCOG00000013223	matr3l1.1	83	30.474	ENSMAUG00000011647	Matr3	55	37.222	Mesocricetus_auratus
ENSHCOG00000013223	matr3l1.1	69	30.163	ENSMICG00000012438	-	63	36.667	Microcebus_murinus
ENSHCOG00000013223	matr3l1.1	82	30.580	ENSMOCG00000015711	Matr3	55	37.222	Microtus_ochrogaster
ENSHCOG00000013223	matr3l1.1	84	30.562	MGP_CAROLIEiJ_G0022108	Matr3	57	37.222	Mus_caroli
ENSHCOG00000013223	matr3l1.1	84	30.562	ENSMUSG00000037236	Matr3	57	37.222	Mus_musculus
ENSHCOG00000013223	matr3l1.1	84	30.357	MGP_PahariEiJ_G0018842	Matr3	57	37.222	Mus_pahari
ENSHCOG00000013223	matr3l1.1	84	31.066	MGP_SPRETEiJ_G0023020	Matr3	57	37.222	Mus_spretus
ENSHCOG00000013223	matr3l1.1	59	50.000	ENSMPUG00000009297	-	60	49.057	Mustela_putorius_furo
ENSHCOG00000013223	matr3l1.1	83	31.991	ENSMLUG00000005798	-	55	37.222	Myotis_lucifugus
ENSHCOG00000013223	matr3l1.1	83	30.717	ENSNGAG00000017452	Matr3	55	37.222	Nannospalax_galili
ENSHCOG00000013223	matr3l1.1	83	30.269	ENSNLEG00000009093	-	55	37.222	Nomascus_leucogenys
ENSHCOG00000013223	matr3l1.1	72	50.000	ENSOPRG00000016511	-	59	49.057	Ochotona_princeps
ENSHCOG00000013223	matr3l1.1	84	30.942	ENSODEG00000003015	-	57	37.222	Octodon_degus
ENSHCOG00000013223	matr3l1.1	83	30.942	ENSOCUG00000026311	MATR3	55	37.222	Oryctolagus_cuniculus
ENSHCOG00000013223	matr3l1.1	72	51.311	ENSORLG00000025674	matr3l1.1	74	57.094	Oryzias_latipes
ENSHCOG00000013223	matr3l1.1	99	51.320	ENSORLG00020009362	matr3l1.1	88	55.543	Oryzias_latipes_hni
ENSHCOG00000013223	matr3l1.1	99	51.235	ENSORLG00015018551	matr3l1.1	80	55.734	Oryzias_latipes_hsok
ENSHCOG00000013223	matr3l1.1	83	30.717	ENSOGAG00000010607	-	55	37.222	Otolemur_garnettii
ENSHCOG00000013223	matr3l1.1	83	30.804	ENSOARG00000016931	-	54	37.222	Ovis_aries
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSPPAG00000001418	-	58	49.057	Pan_paniscus
ENSHCOG00000013223	matr3l1.1	69	31.215	ENSPPAG00000026720	-	51	37.222	Pan_paniscus
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSPPRG00000008004	-	58	37.222	Panthera_pardus
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSPTIG00000010711	-	57	37.222	Panthera_tigris_altaica
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSPTRG00000017294	MATR3	58	49.057	Pan_troglodytes
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSPANG00000012018	-	58	49.057	Papio_anubis
ENSHCOG00000013223	matr3l1.1	99	44.539	ENSPKIG00000000333	matr3l1.1	75	48.968	Paramormyrops_kingsleyae
ENSHCOG00000013223	matr3l1.1	74	55.556	ENSPSIG00000014598	-	57	54.717	Pelodiscus_sinensis
ENSHCOG00000013223	matr3l1.1	50	50.000	ENSPEMG00000020679	Matr3	61	49.057	Peromyscus_maniculatus_bairdii
ENSHCOG00000013223	matr3l1.1	90	33.597	ENSPPYG00000015835	-	58	49.057	Pongo_abelii
ENSHCOG00000013223	matr3l1.1	83	31.222	ENSPCOG00000025718	-	62	37.222	Propithecus_coquereli
ENSHCOG00000013223	matr3l1.1	89	34.387	ENSPVAG00000015431	-	58	47.917	Pteropus_vampyrus
ENSHCOG00000013223	matr3l1.1	57	52.970	ENSPNYG00000015855	-	69	71.186	Pundamilia_nyererei
ENSHCOG00000013223	matr3l1.1	84	30.717	ENSRNOG00000019875	Matr3	57	37.222	Rattus_norvegicus
ENSHCOG00000013223	matr3l1.1	69	32.472	ENSRROG00000043949	-	61	49.057	Rhinopithecus_roxellana
ENSHCOG00000013223	matr3l1.1	80	50.000	ENSRROG00000039415	-	58	49.057	Rhinopithecus_roxellana
ENSHCOG00000013223	matr3l1.1	80	48.077	ENSSBOG00000030159	-	57	47.059	Saimiri_boliviensis_boliviensis
ENSHCOG00000013223	matr3l1.1	83	30.958	ENSSHAG00000010331	-	63	35.912	Sarcophilus_harrisii
ENSHCOG00000013223	matr3l1.1	84	36.464	ENSSPUG00000019236	-	64	38.655	Sphenodon_punctatus
ENSHCOG00000013223	matr3l1.1	83	30.309	ENSSSCG00000014343	-	60	49.057	Sus_scrofa
ENSHCOG00000013223	matr3l1.1	59	55.556	ENSTGUG00000014568	MATR3	56	54.717	Taeniopygia_guttata
ENSHCOG00000013223	matr3l1.1	57	51.944	ENSTRUG00000001692	-	77	51.318	Takifugu_rubripes
ENSHCOG00000013223	matr3l1.1	71	75.926	ENSTNIG00000003166	matr3l1.1	88	73.913	Tetraodon_nigroviridis
ENSHCOG00000013223	matr3l1.1	68	33.466	ENSUAMG00000000097	-	63	37.222	Ursus_americanus
ENSHCOG00000013223	matr3l1.1	83	30.072	ENSUMAG00000015808	-	60	49.057	Ursus_maritimus
ENSHCOG00000013223	matr3l1.1	74	50.000	ENSVPAG00000006337	-	58	49.057	Vicugna_pacos
ENSHCOG00000013223	matr3l1.1	83	30.254	ENSVVUG00000020287	-	55	37.222	Vulpes_vulpes
ENSHCOG00000013223	matr3l1.1	77	39.759	ENSXETG00000003838	matr3	82	49.180	Xenopus_tropicalis