EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000013253 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4789 bases
Position: chrKV880338.1:9433068-9437856
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010606	HARE-HTH	PF05066.13	6.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000017057	-	336	-	ENSHCOP00000010606	111 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000013253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000013253	-	78	56.322	ENSHCOG00000012992	-	52	55.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013253	-	68	56.579	ENSG00000141431	ASXL3	72	68.889	Homo_sapiens
ENSHCOG00000013253	-	78	75.000	ENSG00000171456	ASXL1	100	75.000	Homo_sapiens
ENSHCOG00000013253	-	78	100.000	ENSAPOG00000016599	-	84	100.000	Acanthochromis_polyacanthus
ENSHCOG00000013253	-	78	56.322	ENSACIG00000016887	-	99	56.322	Amphilophus_citrinellus
ENSHCOG00000013253	-	78	100.000	ENSACIG00000013802	-	70	100.000	Amphilophus_citrinellus
ENSHCOG00000013253	-	78	100.000	ENSAPEG00000014832	-	84	100.000	Amphiprion_percula
ENSHCOG00000013253	-	84	96.774	ENSATEG00000000035	-	84	96.774	Anabas_testudineus
ENSHCOG00000013253	-	65	53.333	ENSACAG00000012597	-	71	53.333	Anolis_carolinensis
ENSHCOG00000013253	-	77	75.862	ENSANAG00000032163	ASXL1	98	67.797	Aotus_nancymaae
ENSHCOG00000013253	-	77	75.862	ENSCJAG00000020708	ASXL1	98	67.797	Callithrix_jacchus
ENSHCOG00000013253	-	50	61.818	ENSCHIG00000016821	-	88	61.818	Capra_hircus
ENSHCOG00000013253	-	95	54.717	ENSCAPG00000016451	-	87	54.717	Cavia_aperea
ENSHCOG00000013253	-	87	70.000	ENSCCAG00000023224	ASXL1	98	67.797	Cebus_capucinus
ENSHCOG00000013253	-	70	73.418	ENSCATG00000034343	ASXL1	98	67.797	Cercocebus_atys
ENSHCOG00000013253	-	60	70.588	ENSCANG00000030372	ASXL1	98	67.797	Colobus_angolensis_palliatus
ENSHCOG00000013253	-	82	97.802	ENSCSEG00000004640	-	94	97.802	Cynoglossus_semilaevis
ENSHCOG00000013253	-	80	94.444	ENSCVAG00000011364	-	80	94.444	Cyprinodon_variegatus
ENSHCOG00000013253	-	65	68.056	ENSDORG00000028887	-	83	68.056	Dipodomys_ordii
ENSHCOG00000013253	-	65	68.056	ENSFDAG00000005632	-	80	68.056	Fukomys_damarensis
ENSHCOG00000013253	-	80	97.753	ENSGAFG00000014909	-	93	97.753	Gambusia_affinis
ENSHCOG00000013253	-	58	42.188	ENSGAGG00000011822	-	57	42.188	Gopherus_agassizii
ENSHCOG00000013253	-	61	71.014	ENSGGOG00000003328	ASXL1	98	67.797	Gorilla_gorilla
ENSHCOG00000013253	-	80	75.281	ENSHGLG00000017863	-	85	75.281	Heterocephalus_glaber_female
ENSHCOG00000013253	-	77	60.674	ENSJJAG00000021569	-	91	60.674	Jaculus_jaculus
ENSHCOG00000013253	-	78	98.851	ENSKMAG00000013765	-	97	98.851	Kryptolebias_marmoratus
ENSHCOG00000013253	-	78	100.000	ENSLBEG00000012396	-	90	100.000	Labrus_bergylta
ENSHCOG00000013253	-	70	73.418	ENSMFAG00000029400	ASXL1	98	67.797	Macaca_fascicularis
ENSHCOG00000013253	-	70	73.418	ENSMMUG00000007117	ASXL1	98	67.797	Macaca_mulatta
ENSHCOG00000013253	-	61	69.565	ENSMNEG00000031201	ASXL1	98	67.797	Macaca_nemestrina
ENSHCOG00000013253	-	73	62.963	ENSMLEG00000024749	ASXL1	98	67.797	Mandrillus_leucophaeus
ENSHCOG00000013253	-	78	100.000	ENSMAMG00000008791	-	99	100.000	Mastacembelus_armatus
ENSHCOG00000013253	-	78	75.862	ENSMAUG00000000537	-	61	75.862	Mesocricetus_auratus
ENSHCOG00000013253	-	78	75.862	ENSMOCG00000014066	-	99	75.862	Microtus_ochrogaster
ENSHCOG00000013253	-	78	98.851	ENSMMOG00000017515	-	93	98.851	Mola_mola
ENSHCOG00000013253	-	58	53.125	ENSMMOG00000011196	-	82	53.125	Mola_mola
ENSHCOG00000013253	-	84	95.699	ENSMALG00000021361	-	89	95.699	Monopterus_albus
ENSHCOG00000013253	-	53	55.932	ENSMALG00000020971	-	98	55.932	Monopterus_albus
ENSHCOG00000013253	-	77	57.471	MGP_CAROLIEiJ_G0017573	Asxl2	52	57.895	Mus_caroli
ENSHCOG00000013253	-	77	57.471	ENSMUSG00000037486	Asxl2	52	57.895	Mus_musculus
ENSHCOG00000013253	-	77	57.471	MGP_SPRETEiJ_G0018417	Asxl2	52	57.895	Mus_spretus
ENSHCOG00000013253	-	61	70.588	ENSNGAG00000020297	-	81	70.588	Nannospalax_galili
ENSHCOG00000013253	-	84	93.548	ENSNBRG00000021565	-	99	93.548	Neolamprologus_brichardi
ENSHCOG00000013253	-	61	71.014	ENSNLEG00000009794	ASXL1	98	67.797	Nomascus_leucogenys
ENSHCOG00000013253	-	95	66.981	ENSODEG00000012381	-	92	66.981	Octodon_degus
ENSHCOG00000013253	-	78	98.851	ENSORLG00000027477	-	98	98.851	Oryzias_latipes
ENSHCOG00000013253	-	53	55.932	ENSORLG00000028046	-	90	55.932	Oryzias_latipes
ENSHCOG00000013253	-	78	98.851	ENSORLG00020003431	-	98	98.851	Oryzias_latipes_hni
ENSHCOG00000013253	-	73	51.852	ENSORLG00015003122	-	86	51.852	Oryzias_latipes_hsok
ENSHCOG00000013253	-	78	98.851	ENSORLG00015017723	-	98	98.851	Oryzias_latipes_hsok
ENSHCOG00000013253	-	78	98.851	ENSOMEG00000011176	-	68	98.851	Oryzias_melastigma
ENSHCOG00000013253	-	61	71.014	ENSPPAG00000028038	ASXL1	98	67.797	Pan_paniscus
ENSHCOG00000013253	-	67	64.000	ENSPTIG00000008552	-	92	64.000	Panthera_tigris_altaica
ENSHCOG00000013253	-	70	73.418	ENSPTRG00000013377	ASXL1	98	67.797	Pan_troglodytes
ENSHCOG00000013253	-	70	73.418	ENSPANG00000025544	ASXL1	98	67.797	Papio_anubis
ENSHCOG00000013253	-	78	97.701	ENSPMGG00000017948	-	85	97.701	Periophthalmus_magnuspinnatus
ENSHCOG00000013253	-	78	55.172	ENSPMGG00000024122	-	97	55.172	Periophthalmus_magnuspinnatus
ENSHCOG00000013253	-	78	98.851	ENSPLAG00000004055	-	91	98.851	Poecilia_latipinna
ENSHCOG00000013253	-	78	98.851	ENSPMEG00000000899	-	84	98.851	Poecilia_mexicana
ENSHCOG00000013253	-	78	57.471	ENSPREG00000014267	-	99	57.471	Poecilia_reticulata
ENSHCOG00000013253	-	78	98.851	ENSPREG00000008490	-	87	98.851	Poecilia_reticulata
ENSHCOG00000013253	-	78	73.864	ENSRBIG00000038437	-	100	73.864	Rhinopithecus_bieti
ENSHCOG00000013253	-	61	69.565	ENSRROG00000000172	ASXL1	98	67.797	Rhinopithecus_roxellana
ENSHCOG00000013253	-	60	70.588	ENSSBOG00000023781	ASXL1	98	67.797	Saimiri_boliviensis_boliviensis
ENSHCOG00000013253	-	78	98.851	ENSSFOG00015020389	-	70	98.851	Scleropages_formosus
ENSHCOG00000013253	-	80	96.629	ENSSMAG00000003213	-	87	96.629	Scophthalmus_maximus
ENSHCOG00000013253	-	78	98.851	ENSSDUG00000000824	-	59	98.851	Seriola_dumerili
ENSHCOG00000013253	-	78	98.851	ENSSLDG00000024673	-	56	98.851	Seriola_lalandi_dorsalis
ENSHCOG00000013253	-	52	67.797	ENSSPUG00000018911	-	100	67.797	Sphenodon_punctatus
ENSHCOG00000013253	-	61	55.882	ENSTGUG00000014522	-	98	55.882	Taeniopygia_guttata
ENSHCOG00000013253	-	81	96.667	ENSTRUG00000021192	-	93	96.667	Takifugu_rubripes
ENSHCOG00000013253	-	74	63.415	ENSUAMG00000023398	-	88	63.415	Ursus_americanus
ENSHCOG00000013253	-	50	44.828	ENSUAMG00000019013	-	77	44.828	Ursus_americanus
ENSHCOG00000013253	-	78	98.851	ENSXCOG00000008255	-	91	98.851	Xiphophorus_couchianus
ENSHCOG00000013253	-	80	57.303	ENSXCOG00000001543	-	91	57.303	Xiphophorus_couchianus
ENSHCOG00000013253	-	78	98.851	ENSXMAG00000024079	-	91	98.851	Xiphophorus_maculatus