EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000013256 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 618 bases
Position: chrKV880216.1:1063321-1063938
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010621	zf-C2H2	PF00096.26	6.6e-15	1	2
ENSHCOP00000010621	zf-C2H2	PF00096.26	6.6e-15	2	2
ENSHCOP00000010621	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000017084	-	618	-	ENSHCOP00000010621	205 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000013256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000013256	-	86	55.556	ENSHCOG00000010212	-	79	55.556
ENSHCOG00000013256	-	50	50.000	ENSHCOG00000001942	-	72	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013256	-	88	55.556	ENSAOCG00000010567	-	56	55.556	Amphiprion_ocellaris
ENSHCOG00000013256	-	88	55.556	ENSAPEG00000012300	-	56	55.556	Amphiprion_percula
ENSHCOG00000013256	-	55	50.000	ENSATEG00000014684	-	85	50.943	Anabas_testudineus
ENSHCOG00000013256	-	86	57.789	ENSCVAG00000000634	-	50	57.789	Cyprinodon_variegatus
ENSHCOG00000013256	-	91	51.724	ENSFHEG00000013228	-	58	44.898	Fundulus_heteroclitus
ENSHCOG00000013256	-	94	56.897	ENSGAFG00000001481	-	77	58.537	Gambusia_affinis
ENSHCOG00000013256	-	99	52.609	ENSGAFG00000021013	-	57	53.947	Gambusia_affinis
ENSHCOG00000013256	-	54	62.264	ENSIPUG00000022266	ZNF135	60	62.264	Ictalurus_punctatus
ENSHCOG00000013256	-	67	59.184	ENSKMAG00000012097	-	50	59.184	Kryptolebias_marmoratus
ENSHCOG00000013256	-	65	60.870	ENSMALG00000010959	-	89	60.870	Monopterus_albus
ENSHCOG00000013256	-	99	50.000	ENSOMEG00000019811	-	58	50.000	Oryzias_melastigma
ENSHCOG00000013256	-	99	55.702	ENSPFOG00000023496	-	57	55.702	Poecilia_formosa
ENSHCOG00000013256	-	54	58.824	ENSPNAG00000025882	-	61	58.824	Pygocentrus_nattereri
ENSHCOG00000013256	-	63	53.704	ENSSDUG00000023764	-	89	60.000	Seriola_dumerili
ENSHCOG00000013256	-	88	55.556	ENSSPAG00000018010	-	57	55.556	Stegastes_partitus
ENSHCOG00000013256	-	58	51.613	ENSXCOG00000020769	-	76	51.613	Xiphophorus_couchianus
ENSHCOG00000013256	-	89	55.825	ENSXMAG00000005609	-	52	55.825	Xiphophorus_maculatus