EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000013264 (Gene tree)
Gene ID: 109518877
Gene Symbol: -
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4612 bases
Position: chrKV880057.1:329171-333782
Accession: 109518877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010623	Ribonuc_P_40	PF08584.11	1.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000017097	-	3027	XM_019875002	ENSHCOP00000010623	349 (aa)	XP_019730561	UPI00094E64C9

Gene Model

Click here to download ENSHCOG00000013264's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013264	-	94	30.878	ENSG00000124787	RPP40	97	32.313	Homo_sapiens
ENSHCOG00000013264	-	84	44.702	ENSAPOG00000008660	rpp40	90	44.702	Acanthochromis_polyacanthus
ENSHCOG00000013264	-	93	32.092	ENSAMEG00000012938	RPP40	96	32.092	Ailuropoda_melanoleuca
ENSHCOG00000013264	-	94	47.740	ENSACIG00000003617	rpp40	97	47.740	Amphilophus_citrinellus
ENSHCOG00000013264	-	94	50.720	ENSAOCG00000011846	rpp40	98	50.720	Amphiprion_ocellaris
ENSHCOG00000013264	-	94	50.720	ENSAPEG00000001322	rpp40	98	50.720	Amphiprion_percula
ENSHCOG00000013264	-	94	47.851	ENSATEG00000006584	rpp40	98	48.138	Anabas_testudineus
ENSHCOG00000013264	-	77	31.293	ENSAPLG00000005691	RPP40	97	31.293	Anas_platyrhynchos
ENSHCOG00000013264	-	94	32.670	ENSACAG00000006550	RPP40	86	32.670	Anolis_carolinensis
ENSHCOG00000013264	-	92	30.347	ENSANAG00000029246	RPP40	95	30.347	Aotus_nancymaae
ENSHCOG00000013264	-	94	50.578	ENSACLG00000015883	rpp40	96	50.578	Astatotilapia_calliptera
ENSHCOG00000013264	-	94	37.249	ENSAMXG00000001755	rpp40	97	37.249	Astyanax_mexicanus
ENSHCOG00000013264	-	92	33.046	ENSBTAG00000003332	RPP40	95	33.046	Bos_taurus
ENSHCOG00000013264	-	93	31.897	ENSCJAG00000021373	RPP40	96	31.897	Callithrix_jacchus
ENSHCOG00000013264	-	93	32.378	ENSCAFG00000009435	RPP40	96	32.378	Canis_familiaris
ENSHCOG00000013264	-	93	32.378	ENSCAFG00020013380	RPP40	96	32.378	Canis_lupus_dingo
ENSHCOG00000013264	-	93	32.471	ENSCHIG00000016849	RPP40	98	32.660	Capra_hircus
ENSHCOG00000013264	-	94	31.161	ENSTSYG00000032857	RPP40	97	31.973	Carlito_syrichta
ENSHCOG00000013264	-	87	30.769	ENSCAPG00000004957	RPP40	98	30.769	Cavia_aperea
ENSHCOG00000013264	-	92	33.526	ENSCPOG00000005855	RPP40	95	33.526	Cavia_porcellus
ENSHCOG00000013264	-	93	31.897	ENSCCAG00000019809	RPP40	96	31.897	Cebus_capucinus
ENSHCOG00000013264	-	92	30.636	ENSCATG00000038787	RPP40	95	30.636	Cercocebus_atys
ENSHCOG00000013264	-	94	32.295	ENSCLAG00000003235	RPP40	97	32.295	Chinchilla_lanigera
ENSHCOG00000013264	-	92	31.503	ENSCSAG00000007307	RPP40	95	31.503	Chlorocebus_sabaeus
ENSHCOG00000013264	-	94	31.445	ENSCPBG00000009003	RPP40	97	31.445	Chrysemys_picta_bellii
ENSHCOG00000013264	-	94	30.029	ENSCANG00000033965	RPP40	97	30.029	Colobus_angolensis_palliatus
ENSHCOG00000013264	-	93	32.951	ENSCGRG00001018328	Rpp40	96	32.951	Cricetulus_griseus_chok1gshd
ENSHCOG00000013264	-	93	32.951	ENSCGRG00000011344	Rpp40	96	32.951	Cricetulus_griseus_crigri
ENSHCOG00000013264	-	94	45.058	ENSCSEG00000015006	-	95	45.833	Cynoglossus_semilaevis
ENSHCOG00000013264	-	69	41.603	ENSCVAG00000012169	rpp40	97	44.444	Cyprinodon_variegatus
ENSHCOG00000013264	-	94	40.227	ENSDARG00000017605	rpp40	98	40.227	Danio_rerio
ENSHCOG00000013264	-	77	34.737	ENSDNOG00000048136	RPP40	95	34.737	Dasypus_novemcinctus
ENSHCOG00000013264	-	93	32.286	ENSDORG00000029944	-	96	32.286	Dipodomys_ordii
ENSHCOG00000013264	-	56	32.719	ENSETEG00000007458	RPP40	58	32.719	Echinops_telfairi
ENSHCOG00000013264	-	91	35.965	ENSEBUG00000000386	rpp40	96	36.741	Eptatretus_burgeri
ENSHCOG00000013264	-	92	32.370	ENSEASG00005012116	RPP40	76	32.370	Equus_asinus_asinus
ENSHCOG00000013264	-	92	32.948	ENSECAG00000017247	RPP40	76	32.948	Equus_caballus
ENSHCOG00000013264	-	57	33.816	ENSEEUG00000012087	RPP40	70	33.816	Erinaceus_europaeus
ENSHCOG00000013264	-	93	42.816	ENSELUG00000017004	rpp40	96	42.816	Esox_lucius
ENSHCOG00000013264	-	93	31.322	ENSFCAG00000009249	RPP40	96	31.322	Felis_catus
ENSHCOG00000013264	-	81	32.812	ENSFALG00000013166	RPP40	98	32.812	Ficedula_albicollis
ENSHCOG00000013264	-	94	31.728	ENSFDAG00000013001	-	97	31.728	Fukomys_damarensis
ENSHCOG00000013264	-	94	48.986	ENSFHEG00000021429	rpp40	87	48.986	Fundulus_heteroclitus
ENSHCOG00000013264	-	83	37.377	ENSGMOG00000018653	rpp40	97	37.377	Gadus_morhua
ENSHCOG00000013264	-	93	31.700	ENSGALG00000036074	RPP40	96	31.700	Gallus_gallus
ENSHCOG00000013264	-	78	43.599	ENSGAFG00000004189	-	97	43.599	Gambusia_affinis
ENSHCOG00000013264	-	94	50.000	ENSGACG00000002472	rpp40	97	50.000	Gasterosteus_aculeatus
ENSHCOG00000013264	-	94	32.295	ENSGAGG00000012918	RPP40	97	32.295	Gopherus_agassizii
ENSHCOG00000013264	-	94	30.878	ENSGGOG00000013764	RPP40	97	30.878	Gorilla_gorilla
ENSHCOG00000013264	-	87	47.385	ENSHBUG00000009378	rpp40	94	47.385	Haplochromis_burtoni
ENSHCOG00000013264	-	94	31.728	ENSHGLG00000004871	RPP40	97	31.728	Heterocephalus_glaber_female
ENSHCOG00000013264	-	94	31.728	ENSHGLG00100002080	RPP40	97	31.728	Heterocephalus_glaber_male
ENSHCOG00000013264	-	92	40.698	ENSIPUG00000008951	RPP40	96	40.698	Ictalurus_punctatus
ENSHCOG00000013264	-	94	33.144	ENSSTOG00000011199	RPP40	97	33.144	Ictidomys_tridecemlineatus
ENSHCOG00000013264	-	94	33.048	ENSJJAG00000020629	Rpp40	97	33.048	Jaculus_jaculus
ENSHCOG00000013264	-	94	46.957	ENSKMAG00000019358	rpp40	97	46.957	Kryptolebias_marmoratus
ENSHCOG00000013264	-	94	48.997	ENSLBEG00000022724	rpp40	98	48.997	Labrus_bergylta
ENSHCOG00000013264	-	91	34.795	ENSLACG00000014848	RPP40	94	34.795	Latimeria_chalumnae
ENSHCOG00000013264	-	92	37.391	ENSLOCG00000011650	rpp40	95	37.391	Lepisosteus_oculatus
ENSHCOG00000013264	-	77	34.014	ENSLAFG00000007530	RPP40	97	34.014	Loxodonta_africana
ENSHCOG00000013264	-	93	30.747	ENSMFAG00000043100	RPP40	96	30.747	Macaca_fascicularis
ENSHCOG00000013264	-	93	30.747	ENSMMUG00000004966	RPP40	96	30.747	Macaca_mulatta
ENSHCOG00000013264	-	92	30.925	ENSMNEG00000041986	RPP40	97	31.633	Macaca_nemestrina
ENSHCOG00000013264	-	74	32.039	ENSMLEG00000040851	RPP40	98	32.039	Mandrillus_leucophaeus
ENSHCOG00000013264	-	94	50.432	ENSMAMG00000019551	rpp40	97	50.432	Mastacembelus_armatus
ENSHCOG00000013264	-	94	50.578	ENSMZEG00005019475	rpp40	97	50.578	Maylandia_zebra
ENSHCOG00000013264	-	83	32.484	ENSMGAG00000004009	RPP40	87	32.484	Meleagris_gallopavo
ENSHCOG00000013264	-	93	32.759	ENSMAUG00000010268	Rpp40	96	32.759	Mesocricetus_auratus
ENSHCOG00000013264	-	94	33.711	ENSMICG00000003297	RPP40	97	30.747	Microcebus_murinus
ENSHCOG00000013264	-	93	31.897	ENSMOCG00000000305	Rpp40	96	31.897	Microtus_ochrogaster
ENSHCOG00000013264	-	95	41.399	ENSMMOG00000020591	-	98	41.399	Mola_mola
ENSHCOG00000013264	-	93	31.805	ENSMODG00000009826	RPP40	96	31.805	Monodelphis_domestica
ENSHCOG00000013264	-	94	51.873	ENSMALG00000020133	rpp40	98	52.961	Monopterus_albus
ENSHCOG00000013264	-	93	33.621	MGP_CAROLIEiJ_G0018429	Rpp40	96	33.621	Mus_caroli
ENSHCOG00000013264	-	93	33.046	ENSMUSG00000021418	Rpp40	96	33.046	Mus_musculus
ENSHCOG00000013264	-	93	32.471	MGP_PahariEiJ_G0019497	Rpp40	96	32.471	Mus_pahari
ENSHCOG00000013264	-	93	33.046	MGP_SPRETEiJ_G0019309	Rpp40	96	33.046	Mus_spretus
ENSHCOG00000013264	-	93	32.665	ENSMPUG00000000530	RPP40	96	31.733	Mustela_putorius_furo
ENSHCOG00000013264	-	92	34.006	ENSMLUG00000000501	RPP40	95	34.006	Myotis_lucifugus
ENSHCOG00000013264	-	94	32.011	ENSNGAG00000023955	-	97	32.011	Nannospalax_galili
ENSHCOG00000013264	-	83	46.732	ENSNBRG00000017465	rpp40	84	46.774	Neolamprologus_brichardi
ENSHCOG00000013264	-	94	31.445	ENSNLEG00000034397	RPP40	97	31.445	Nomascus_leucogenys
ENSHCOG00000013264	-	93	31.805	ENSODEG00000018153	-	95	31.805	Octodon_degus
ENSHCOG00000013264	-	93	32.759	ENSODEG00000007255	-	96	32.759	Octodon_degus
ENSHCOG00000013264	-	94	50.289	ENSONIG00000014016	rpp40	97	50.289	Oreochromis_niloticus
ENSHCOG00000013264	-	77	32.203	ENSOANG00000001200	RPP40	97	32.203	Ornithorhynchus_anatinus
ENSHCOG00000013264	-	94	33.051	ENSOCUG00000000354	RPP40	97	33.051	Oryctolagus_cuniculus
ENSHCOG00000013264	-	92	50.294	ENSORLG00000008242	-	96	50.294	Oryzias_latipes
ENSHCOG00000013264	-	95	48.711	ENSORLG00020013745	-	90	48.711	Oryzias_latipes_hni
ENSHCOG00000013264	-	92	50.588	ENSORLG00015000887	-	96	50.588	Oryzias_latipes_hsok
ENSHCOG00000013264	-	92	51.176	ENSOMEG00000002747	rpp40	96	51.176	Oryzias_melastigma
ENSHCOG00000013264	-	94	32.861	ENSOGAG00000006055	RPP40	97	32.861	Otolemur_garnettii
ENSHCOG00000013264	-	84	32.087	ENSOARG00000018783	RPP40	98	33.333	Ovis_aries
ENSHCOG00000013264	-	94	30.878	ENSPPAG00000023703	RPP40	97	30.878	Pan_paniscus
ENSHCOG00000013264	-	93	31.034	ENSPPRG00000005612	RPP40	96	31.034	Panthera_pardus
ENSHCOG00000013264	-	94	30.878	ENSPTRG00000017690	RPP40	97	30.878	Pan_troglodytes
ENSHCOG00000013264	-	94	30.595	ENSPANG00000017865	RPP40	97	30.595	Papio_anubis
ENSHCOG00000013264	-	94	35.694	ENSPKIG00000006311	rpp40	98	36.261	Paramormyrops_kingsleyae
ENSHCOG00000013264	-	70	31.203	ENSPMAG00000008412	rpp40	95	31.203	Petromyzon_marinus
ENSHCOG00000013264	-	94	32.295	ENSPCIG00000010682	RPP40	97	32.295	Phascolarctos_cinereus
ENSHCOG00000013264	-	94	47.126	ENSPFOG00000011460	rpp40	97	47.126	Poecilia_formosa
ENSHCOG00000013264	-	94	46.532	ENSPLAG00000001334	rpp40	98	46.532	Poecilia_latipinna
ENSHCOG00000013264	-	94	47.977	ENSPMEG00000007721	rpp40	98	47.977	Poecilia_mexicana
ENSHCOG00000013264	-	94	48.555	ENSPREG00000009215	rpp40	98	48.555	Poecilia_reticulata
ENSHCOG00000013264	-	94	30.878	ENSPPYG00000016194	RPP40	97	30.878	Pongo_abelii
ENSHCOG00000013264	-	94	32.861	ENSPCOG00000003907	RPP40	97	32.861	Propithecus_coquereli
ENSHCOG00000013264	-	93	32.759	ENSPVAG00000011325	RPP40	96	32.759	Pteropus_vampyrus
ENSHCOG00000013264	-	78	47.203	ENSPNYG00000004432	rpp40	98	47.203	Pundamilia_nyererei
ENSHCOG00000013264	-	92	39.884	ENSPNAG00000019125	rpp40	96	39.884	Pygocentrus_nattereri
ENSHCOG00000013264	-	93	31.609	ENSRNOG00000016226	Rpp40	97	31.973	Rattus_norvegicus
ENSHCOG00000013264	-	92	30.925	ENSRBIG00000035800	RPP40	97	31.633	Rhinopithecus_bieti
ENSHCOG00000013264	-	92	30.925	ENSRROG00000039116	RPP40	95	30.925	Rhinopithecus_roxellana
ENSHCOG00000013264	-	93	31.034	ENSSBOG00000020297	RPP40	96	31.034	Saimiri_boliviensis_boliviensis
ENSHCOG00000013264	-	72	32.963	ENSSHAG00000002102	RPP40	97	32.963	Sarcophilus_harrisii
ENSHCOG00000013264	-	94	39.660	ENSSFOG00015001142	rpp40	79	39.660	Scleropages_formosus
ENSHCOG00000013264	-	94	51.585	ENSSDUG00000007202	rpp40	98	51.585	Seriola_dumerili
ENSHCOG00000013264	-	94	51.009	ENSSLDG00000017563	rpp40	98	51.009	Seriola_lalandi_dorsalis
ENSHCOG00000013264	-	94	32.670	ENSSPUG00000017487	-	96	32.670	Sphenodon_punctatus
ENSHCOG00000013264	-	76	30.000	ENSSPUG00000018950	-	98	30.000	Sphenodon_punctatus
ENSHCOG00000013264	-	94	53.602	ENSSPAG00000022716	rpp40	98	53.602	Stegastes_partitus
ENSHCOG00000013264	-	92	34.006	ENSSSCG00000000998	RPP40	98	34.343	Sus_scrofa
ENSHCOG00000013264	-	92	33.429	ENSTGUG00000002258	-	97	33.429	Taeniopygia_guttata
ENSHCOG00000013264	-	95	51.003	ENSTRUG00000003755	rpp40	98	51.003	Takifugu_rubripes
ENSHCOG00000013264	-	95	51.724	ENSTNIG00000003077	rpp40	98	51.724	Tetraodon_nigroviridis
ENSHCOG00000013264	-	93	31.805	ENSUAMG00000002159	RPP40	97	32.203	Ursus_americanus
ENSHCOG00000013264	-	93	31.805	ENSUMAG00000018639	RPP40	90	31.805	Ursus_maritimus
ENSHCOG00000013264	-	93	32.378	ENSVVUG00000005451	RPP40	96	32.378	Vulpes_vulpes
ENSHCOG00000013264	-	91	31.014	ENSXETG00000017617	rpp40	95	30.678	Xenopus_tropicalis
ENSHCOG00000013264	-	94	34.985	ENSXMAG00000024940	rpp40	97	34.682	Xiphophorus_maculatus