EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000013275 (Gene tree)
Gene ID: 109518871
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4028 bases
Position: chrKV880057.1:324745-328772
Accession: 109518871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000010637	RIO1	PF01163.22	1.4e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000017115	-	1829	XM_019874988	ENSHCOP00000010637	529 (aa)	XP_019730547	-

Gene Model

Click here to download ENSHCOG00000013275's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000013275	riok1	67	37.802	ENSHCOG00000006794	riok3	64	39.763

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013275	riok1	90	70.341	ENSG00000124784	RIOK1	88	69.940	Homo_sapiens
ENSHCOG00000013275	riok1	60	75.949	ENSAPOG00000015632	riok1	99	76.266	Acanthochromis_polyacanthus
ENSHCOG00000013275	riok1	90	70.588	ENSAMEG00000017367	RIOK1	88	70.000	Ailuropoda_melanoleuca
ENSHCOG00000013275	riok1	92	77.347	ENSACIG00000003735	riok1	89	77.755	Amphilophus_citrinellus
ENSHCOG00000013275	riok1	92	79.959	ENSAOCG00000011818	riok1	89	80.164	Amphiprion_ocellaris
ENSHCOG00000013275	riok1	92	79.755	ENSAPEG00000001345	riok1	89	79.959	Amphiprion_percula
ENSHCOG00000013275	riok1	85	78.761	ENSATEG00000006594	riok1	98	78.761	Anabas_testudineus
ENSHCOG00000013275	riok1	88	71.730	ENSAPLG00000004196	RIOK1	100	71.822	Anas_platyrhynchos
ENSHCOG00000013275	riok1	91	70.624	ENSACAG00000000695	RIOK1	88	69.539	Anolis_carolinensis
ENSHCOG00000013275	riok1	90	61.122	ENSANAG00000023777	RIOK1	87	60.922	Aotus_nancymaae
ENSHCOG00000013275	riok1	92	79.192	ENSACLG00000015799	riok1	90	79.192	Astatotilapia_calliptera
ENSHCOG00000013275	riok1	91	73.523	ENSAMXG00000015286	riok1	85	74.494	Astyanax_mexicanus
ENSHCOG00000013275	riok1	91	69.777	ENSBTAG00000013821	RIOK1	88	68.651	Bos_taurus
ENSHCOG00000013275	riok1	89	45.493	WBGene00019698	riok-1	85	47.758	Caenorhabditis_elegans
ENSHCOG00000013275	riok1	90	70.341	ENSCJAG00000042960	RIOK1	88	69.940	Callithrix_jacchus
ENSHCOG00000013275	riok1	90	70.385	ENSCAFG00000009563	RIOK1	88	69.800	Canis_familiaris
ENSHCOG00000013275	riok1	87	67.579	ENSCAFG00020013233	RIOK1	75	73.986	Canis_lupus_dingo
ENSHCOG00000013275	riok1	91	68.776	ENSCHIG00000001534	RIOK1	88	68.263	Capra_hircus
ENSHCOG00000013275	riok1	70	67.708	ENSTSYG00000011368	RIOK1	100	67.584	Carlito_syrichta
ENSHCOG00000013275	riok1	83	70.067	ENSCAPG00000008489	RIOK1	99	69.828	Cavia_aperea
ENSHCOG00000013275	riok1	85	70.085	ENSCPOG00000009882	RIOK1	88	67.659	Cavia_porcellus
ENSHCOG00000013275	riok1	90	70.423	ENSCCAG00000024061	RIOK1	88	69.339	Cebus_capucinus
ENSHCOG00000013275	riok1	90	70.423	ENSCATG00000001548	RIOK1	88	69.141	Cercocebus_atys
ENSHCOG00000013275	riok1	88	70.124	ENSCLAG00000003522	RIOK1	88	68.254	Chinchilla_lanigera
ENSHCOG00000013275	riok1	80	71.136	ENSCSAG00000007396	RIOK1	77	73.508	Chlorocebus_sabaeus
ENSHCOG00000013275	riok1	77	74.818	ENSCPBG00000008685	RIOK1	75	72.811	Chrysemys_picta_bellii
ENSHCOG00000013275	riok1	90	70.624	ENSCANG00000032919	RIOK1	88	69.201	Colobus_angolensis_palliatus
ENSHCOG00000013275	riok1	94	66.925	ENSCGRG00001018868	Riok1	88	67.525	Cricetulus_griseus_chok1gshd
ENSHCOG00000013275	riok1	94	66.925	ENSCGRG00000008015	Riok1	88	67.525	Cricetulus_griseus_crigri
ENSHCOG00000013275	riok1	92	54.545	ENSCSEG00000015014	riok1	88	55.152	Cynoglossus_semilaevis
ENSHCOG00000013275	riok1	60	69.207	ENSCVAG00000011291	riok1	99	70.440	Cyprinodon_variegatus
ENSHCOG00000013275	riok1	91	72.188	ENSDARG00000016399	riok1	89	72.984	Danio_rerio
ENSHCOG00000013275	riok1	88	70.146	ENSDNOG00000015813	RIOK1	87	67.465	Dasypus_novemcinctus
ENSHCOG00000013275	riok1	90	70.183	ENSDORG00000008530	Riok1	88	68.800	Dipodomys_ordii
ENSHCOG00000013275	riok1	83	53.595	FBgn0036187	RIOK1	79	53.766	Drosophila_melanogaster
ENSHCOG00000013275	riok1	90	68.737	ENSETEG00000020273	RIOK1	89	67.525	Echinops_telfairi
ENSHCOG00000013275	riok1	90	63.017	ENSEBUG00000013672	riok1	87	62.525	Eptatretus_burgeri
ENSHCOG00000013275	riok1	74	76.071	ENSEASG00005012032	RIOK1	74	73.747	Equus_asinus_asinus
ENSHCOG00000013275	riok1	88	71.757	ENSECAG00000009007	RIOK1	88	70.000	Equus_caballus
ENSHCOG00000013275	riok1	74	63.613	ENSEEUG00000007123	RIOK1	89	63.613	Erinaceus_europaeus
ENSHCOG00000013275	riok1	90	73.814	ENSELUG00000017029	riok1	88	73.077	Esox_lucius
ENSHCOG00000013275	riok1	88	70.947	ENSFCAG00000027290	RIOK1	87	68.127	Felis_catus
ENSHCOG00000013275	riok1	90	69.592	ENSFALG00000013244	RIOK1	88	69.185	Ficedula_albicollis
ENSHCOG00000013275	riok1	90	68.699	ENSFDAG00000019139	RIOK1	88	67.396	Fukomys_damarensis
ENSHCOG00000013275	riok1	72	81.347	ENSFHEG00000021419	riok1	87	80.407	Fundulus_heteroclitus
ENSHCOG00000013275	riok1	76	73.659	ENSGMOG00000018668	riok1	96	73.659	Gadus_morhua
ENSHCOG00000013275	riok1	60	65.231	ENSGALG00000012795	RIOK1	100	65.663	Gallus_gallus
ENSHCOG00000013275	riok1	92	63.599	ENSGAFG00000004091	riok1	83	64.213	Gambusia_affinis
ENSHCOG00000013275	riok1	89	78.616	ENSGACG00000002496	riok1	95	79.550	Gasterosteus_aculeatus
ENSHCOG00000013275	riok1	75	74.384	ENSGAGG00000002262	RIOK1	88	73.608	Gopherus_agassizii
ENSHCOG00000013275	riok1	90	62.551	ENSGGOG00000011037	RIOK1	66	75.749	Gorilla_gorilla
ENSHCOG00000013275	riok1	88	69.295	ENSHGLG00000008699	RIOK1	88	67.475	Heterocephalus_glaber_female
ENSHCOG00000013275	riok1	92	66.998	ENSHGLG00100008188	RIOK1	88	67.475	Heterocephalus_glaber_male
ENSHCOG00000013275	riok1	91	72.819	ENSIPUG00000003290	riok1	88	73.589	Ictalurus_punctatus
ENSHCOG00000013275	riok1	90	70.020	ENSSTOG00000009289	RIOK1	88	69.980	Ictidomys_tridecemlineatus
ENSHCOG00000013275	riok1	91	69.899	ENSJJAG00000015152	Riok1	88	69.124	Jaculus_jaculus
ENSHCOG00000013275	riok1	72	79.897	ENSKMAG00000019378	riok1	99	79.897	Kryptolebias_marmoratus
ENSHCOG00000013275	riok1	92	81.800	ENSLBEG00000016650	riok1	87	81.595	Labrus_bergylta
ENSHCOG00000013275	riok1	91	62.245	ENSLACG00000000300	RIOK1	87	61.818	Latimeria_chalumnae
ENSHCOG00000013275	riok1	91	73.116	ENSLOCG00000011728	riok1	88	73.022	Lepisosteus_oculatus
ENSHCOG00000013275	riok1	90	70.423	ENSLAFG00000005504	RIOK1	90	69.880	Loxodonta_africana
ENSHCOG00000013275	riok1	90	70.624	ENSMFAG00000029990	RIOK1	88	69.336	Macaca_fascicularis
ENSHCOG00000013275	riok1	90	70.423	ENSMMUG00000015577	RIOK1	88	69.141	Macaca_mulatta
ENSHCOG00000013275	riok1	90	68.008	ENSMNEG00000034396	RIOK1	84	73.671	Macaca_nemestrina
ENSHCOG00000013275	riok1	90	70.423	ENSMLEG00000026327	RIOK1	88	69.141	Mandrillus_leucophaeus
ENSHCOG00000013275	riok1	92	78.776	ENSMAMG00000019557	riok1	89	78.776	Mastacembelus_armatus
ENSHCOG00000013275	riok1	92	79.192	ENSMZEG00005019482	riok1	90	79.192	Maylandia_zebra
ENSHCOG00000013275	riok1	88	71.368	ENSMGAG00000003816	RIOK1	88	69.261	Meleagris_gallopavo
ENSHCOG00000013275	riok1	94	67.573	ENSMAUG00000012751	Riok1	88	67.451	Mesocricetus_auratus
ENSHCOG00000013275	riok1	90	70.161	ENSMICG00000044301	RIOK1	74	69.739	Microcebus_murinus
ENSHCOG00000013275	riok1	96	64.896	ENSMOCG00000017032	Riok1	88	67.400	Microtus_ochrogaster
ENSHCOG00000013275	riok1	88	70.000	ENSMMOG00000020598	riok1	87	70.200	Mola_mola
ENSHCOG00000013275	riok1	91	69.777	ENSMODG00000009964	RIOK1	87	69.400	Monodelphis_domestica
ENSHCOG00000013275	riok1	92	68.712	ENSMALG00000019982	riok1	92	69.121	Monopterus_albus
ENSHCOG00000013275	riok1	91	68.000	MGP_CAROLIEiJ_G0018439	Riok1	88	67.262	Mus_caroli
ENSHCOG00000013275	riok1	91	68.000	ENSMUSG00000021428	Riok1	99	64.390	Mus_musculus
ENSHCOG00000013275	riok1	91	67.600	MGP_PahariEiJ_G0019507	Riok1	88	66.865	Mus_pahari
ENSHCOG00000013275	riok1	91	67.465	MGP_SPRETEiJ_G0019319	Riok1	88	66.865	Mus_spretus
ENSHCOG00000013275	riok1	90	70.423	ENSMPUG00000000570	RIOK1	88	69.200	Mustela_putorius_furo
ENSHCOG00000013275	riok1	90	70.707	ENSMLUG00000015312	RIOK1	88	69.841	Myotis_lucifugus
ENSHCOG00000013275	riok1	90	69.838	ENSNGAG00000021734	Riok1	88	69.339	Nannospalax_galili
ENSHCOG00000013275	riok1	76	82.324	ENSNBRG00000017489	riok1	80	82.452	Neolamprologus_brichardi
ENSHCOG00000013275	riok1	90	63.711	ENSNLEG00000011621	RIOK1	87	62.398	Nomascus_leucogenys
ENSHCOG00000013275	riok1	88	46.723	ENSMEUG00000006679	-	84	46.723	Notamacropus_eugenii
ENSHCOG00000013275	riok1	69	66.307	ENSOPRG00000009524	RIOK1	100	66.307	Ochotona_princeps
ENSHCOG00000013275	riok1	58	66.129	ENSODEG00000005663	RIOK1	81	63.554	Octodon_degus
ENSHCOG00000013275	riok1	92	79.592	ENSONIG00000014010	riok1	88	79.592	Oreochromis_niloticus
ENSHCOG00000013275	riok1	85	70.878	ENSOANG00000012553	RIOK1	99	72.826	Ornithorhynchus_anatinus
ENSHCOG00000013275	riok1	88	70.686	ENSOCUG00000011824	RIOK1	88	69.048	Oryctolagus_cuniculus
ENSHCOG00000013275	riok1	92	76.735	ENSORLG00000008221	riok1	89	76.735	Oryzias_latipes
ENSHCOG00000013275	riok1	99	71.917	ENSORLG00020013838	riok1	68	71.917	Oryzias_latipes_hni
ENSHCOG00000013275	riok1	99	73.245	ENSORLG00015009817	riok1	96	73.157	Oryzias_latipes_hsok
ENSHCOG00000013275	riok1	92	77.551	ENSOMEG00000002758	riok1	81	77.551	Oryzias_melastigma
ENSHCOG00000013275	riok1	90	63.747	ENSOGAG00000010192	RIOK1	88	62.253	Otolemur_garnettii
ENSHCOG00000013275	riok1	92	68.588	ENSOARG00000017747	RIOK1	88	68.463	Ovis_aries
ENSHCOG00000013275	riok1	90	61.355	ENSPPAG00000016349	RIOK1	100	65.060	Pan_paniscus
ENSHCOG00000013275	riok1	90	69.636	ENSPPRG00000001932	RIOK1	87	69.062	Panthera_pardus
ENSHCOG00000013275	riok1	90	69.636	ENSPTIG00000018545	RIOK1	87	69.062	Panthera_tigris_altaica
ENSHCOG00000013275	riok1	90	70.741	ENSPTRG00000017700	RIOK1	88	69.763	Pan_troglodytes
ENSHCOG00000013275	riok1	90	70.968	ENSPANG00000016522	RIOK1	88	69.336	Papio_anubis
ENSHCOG00000013275	riok1	90	73.045	ENSPKIG00000006442	riok1	89	72.414	Paramormyrops_kingsleyae
ENSHCOG00000013275	riok1	90	71.690	ENSPSIG00000006488	RIOK1	87	70.179	Pelodiscus_sinensis
ENSHCOG00000013275	riok1	73	74.359	ENSPMGG00000017807	riok1	96	72.145	Periophthalmus_magnuspinnatus
ENSHCOG00000013275	riok1	90	68.952	ENSPEMG00000017844	Riok1	88	67.659	Peromyscus_maniculatus_bairdii
ENSHCOG00000013275	riok1	62	72.973	ENSPMAG00000006351	riok1	81	71.930	Petromyzon_marinus
ENSHCOG00000013275	riok1	79	70.892	ENSPCIG00000012653	RIOK1	75	72.381	Phascolarctos_cinereus
ENSHCOG00000013275	riok1	90	74.120	ENSPFOG00000011532	riok1	90	73.469	Poecilia_formosa
ENSHCOG00000013275	riok1	90	74.327	ENSPLAG00000001341	riok1	90	73.673	Poecilia_latipinna
ENSHCOG00000013275	riok1	90	74.327	ENSPMEG00000007710	riok1	92	73.673	Poecilia_mexicana
ENSHCOG00000013275	riok1	90	73.706	ENSPREG00000009237	riok1	91	73.061	Poecilia_reticulata
ENSHCOG00000013275	riok1	90	70.732	ENSPPYG00000016207	RIOK1	88	69.565	Pongo_abelii
ENSHCOG00000013275	riok1	91	58.918	ENSPCAG00000007892	RIOK1	90	58.730	Procavia_capensis
ENSHCOG00000013275	riok1	90	71.602	ENSPVAG00000014091	RIOK1	87	71.000	Pteropus_vampyrus
ENSHCOG00000013275	riok1	60	79.624	ENSPNYG00000004465	riok1	100	79.937	Pundamilia_nyererei
ENSHCOG00000013275	riok1	91	73.320	ENSPNAG00000015435	riok1	87	73.279	Pygocentrus_nattereri
ENSHCOG00000013275	riok1	95	66.346	ENSRNOG00000014049	Riok1	99	70.043	Rattus_norvegicus
ENSHCOG00000013275	riok1	90	70.423	ENSRBIG00000036685	RIOK1	88	69.006	Rhinopithecus_bieti
ENSHCOG00000013275	riok1	90	70.423	ENSRROG00000036611	RIOK1	88	69.006	Rhinopithecus_roxellana
ENSHCOG00000013275	riok1	63	40.503	YOR119C	RIO1	95	38.809	Saccharomyces_cerevisiae
ENSHCOG00000013275	riok1	90	70.624	ENSSBOG00000012588	RIOK1	88	69.539	Saimiri_boliviensis_boliviensis
ENSHCOG00000013275	riok1	73	75.127	ENSSHAG00000003091	RIOK1	80	72.837	Sarcophilus_harrisii
ENSHCOG00000013275	riok1	91	73.211	ENSSFOG00015001035	riok1	89	73.038	Scleropages_formosus
ENSHCOG00000013275	riok1	60	78.683	ENSSDUG00000007291	riok1	100	78.683	Seriola_dumerili
ENSHCOG00000013275	riok1	92	82.004	ENSSLDG00000017657	riok1	89	82.004	Seriola_lalandi_dorsalis
ENSHCOG00000013275	riok1	89	62.208	ENSSPUG00000007624	RIOK1	85	60.575	Sphenodon_punctatus
ENSHCOG00000013275	riok1	99	76.181	ENSSPAG00000022710	riok1	90	80.777	Stegastes_partitus
ENSHCOG00000013275	riok1	90	67.735	ENSSSCG00000001024	RIOK1	88	67.131	Sus_scrofa
ENSHCOG00000013275	riok1	90	70.061	ENSTGUG00000002331	RIOK1	88	69.478	Taeniopygia_guttata
ENSHCOG00000013275	riok1	54	66.897	ENSTRUG00000001575	-	98	67.368	Takifugu_rubripes
ENSHCOG00000013275	riok1	79	65.403	ENSTRUG00000002854	riok1	91	67.560	Takifugu_rubripes
ENSHCOG00000013275	riok1	92	69.697	ENSTNIG00000003078	riok1	88	68.889	Tetraodon_nigroviridis
ENSHCOG00000013275	riok1	90	67.276	ENSTBEG00000016730	RIOK1	88	66.733	Tupaia_belangeri
ENSHCOG00000013275	riok1	72	75.515	ENSTTRG00000017335	RIOK1	81	75.515	Tursiops_truncatus
ENSHCOG00000013275	riok1	80	72.045	ENSUAMG00000003721	RIOK1	75	73.986	Ursus_americanus
ENSHCOG00000013275	riok1	90	70.423	ENSUMAG00000018461	RIOK1	88	69.600	Ursus_maritimus
ENSHCOG00000013275	riok1	60	78.571	ENSVPAG00000010813	-	50	82.143	Vicugna_pacos
ENSHCOG00000013275	riok1	90	70.385	ENSVVUG00000005018	RIOK1	88	69.800	Vulpes_vulpes
ENSHCOG00000013275	riok1	92	67.480	ENSXETG00000020436	riok1	88	67.480	Xenopus_tropicalis
ENSHCOG00000013275	riok1	88	71.154	ENSXCOG00000000245	riok1	100	71.154	Xiphophorus_couchianus
ENSHCOG00000013275	riok1	76	76.716	ENSXMAG00000014572	riok1	82	75.592	Xiphophorus_maculatus