EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000013439 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2667 bases
Position: chrKV879954.1:1259093-1261759
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000024264	SpoU_methylase	PF00588.19	4.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026318	-	546	-	ENSHCOP00000024264	182 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000013439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013439	si:dkey-85a20.4	99	87.222	ENSACIG00000020931	si:dkey-85a20.4	99	87.222	Amphilophus_citrinellus
ENSHCOG00000013439	si:dkey-85a20.4	100	89.071	ENSAOCG00000009950	si:dkey-85a20.4	99	89.071	Amphiprion_ocellaris
ENSHCOG00000013439	si:dkey-85a20.4	100	89.011	ENSAPEG00000012906	si:dkey-85a20.4	99	89.011	Amphiprion_percula
ENSHCOG00000013439	si:dkey-85a20.4	99	86.667	ENSACLG00000002018	si:dkey-85a20.4	99	86.667	Astatotilapia_calliptera
ENSHCOG00000013439	si:dkey-85a20.4	100	82.418	ENSAMXG00000018028	si:dkey-85a20.4	95	82.418	Astyanax_mexicanus
ENSHCOG00000013439	si:dkey-85a20.4	85	51.923	ENSCING00000006232	-	60	51.923	Ciona_intestinalis
ENSHCOG00000013439	si:dkey-85a20.4	85	89.032	ENSCVAG00000011124	-	100	89.032	Cyprinodon_variegatus
ENSHCOG00000013439	si:dkey-85a20.4	100	79.348	ENSDARG00000092550	si:dkey-85a20.4	95	79.348	Danio_rerio
ENSHCOG00000013439	si:dkey-85a20.4	88	93.750	ENSLBEG00000008830	-	100	93.750	Labrus_bergylta
ENSHCOG00000013439	si:dkey-85a20.4	100	66.310	MGP_CAROLIEiJ_G0031729	Tarbp1	55	66.310	Mus_caroli
ENSHCOG00000013439	si:dkey-85a20.4	99	86.111	ENSNBRG00000014368	si:dkey-85a20.4	99	86.111	Neolamprologus_brichardi
ENSHCOG00000013439	si:dkey-85a20.4	100	89.560	ENSOMEG00000001519	-	99	89.560	Oryzias_melastigma
ENSHCOG00000013439	si:dkey-85a20.4	100	85.714	ENSPMGG00000019801	si:dkey-85a20.4	99	85.714	Periophthalmus_magnuspinnatus
ENSHCOG00000013439	si:dkey-85a20.4	76	78.014	ENSPNAG00000019497	si:dkey-85a20.4	100	78.014	Pygocentrus_nattereri
ENSHCOG00000013439	si:dkey-85a20.4	86	88.050	ENSTRUG00000021368	si:dkey-85a20.4	99	88.050	Takifugu_rubripes