EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000013459 (Gene tree)
Gene ID: 109520136
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2979 bases
Position: chrKV880083.1:147185-150163
Accession: 109520136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000024275	tRNA_Me_trans	PF03054.16	1.1e-136	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026333	-	1977	XM_019877119	ENSHCOP00000024275	415 (aa)	XP_019732678	UPI00094EE372

Gene Model

Click here to download ENSHCOG00000013459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000013459	trmu	99	69.175	ENSG00000100416	TRMU	100	78.571	Homo_sapiens
ENSHCOG00000013459	trmu	99	84.096	ENSAPOG00000014458	trmu	99	84.096	Acanthochromis_polyacanthus
ENSHCOG00000013459	trmu	96	70.927	ENSAMEG00000003319	TRMU	96	70.927	Ailuropoda_melanoleuca
ENSHCOG00000013459	trmu	99	83.333	ENSACIG00000002101	trmu	99	83.333	Amphilophus_citrinellus
ENSHCOG00000013459	trmu	99	84.337	ENSAOCG00000013155	trmu	99	84.337	Amphiprion_ocellaris
ENSHCOG00000013459	trmu	99	84.096	ENSAPEG00000013350	trmu	99	84.096	Amphiprion_percula
ENSHCOG00000013459	trmu	99	83.614	ENSATEG00000007814	trmu	99	83.614	Anabas_testudineus
ENSHCOG00000013459	trmu	93	71.762	ENSAPLG00000016380	TRMU	98	71.762	Anas_platyrhynchos
ENSHCOG00000013459	trmu	99	70.316	ENSACAG00000007720	TRMU	99	70.316	Anolis_carolinensis
ENSHCOG00000013459	trmu	99	69.660	ENSANAG00000038053	TRMU	98	69.660	Aotus_nancymaae
ENSHCOG00000013459	trmu	99	84.783	ENSACLG00000005395	trmu	98	86.721	Astatotilapia_calliptera
ENSHCOG00000013459	trmu	99	78.883	ENSAMXG00000005282	trmu	99	78.883	Astyanax_mexicanus
ENSHCOG00000013459	trmu	99	69.343	ENSBTAG00000005595	TRMU	99	69.343	Bos_taurus
ENSHCOG00000013459	trmu	92	41.131	WBGene00007114	mttu-1	98	41.131	Caenorhabditis_elegans
ENSHCOG00000013459	trmu	99	68.204	ENSCJAG00000000198	TRMU	98	68.204	Callithrix_jacchus
ENSHCOG00000013459	trmu	96	71.000	ENSCAFG00000000779	TRMU	94	71.000	Canis_familiaris
ENSHCOG00000013459	trmu	96	71.000	ENSCAFG00020009184	TRMU	94	71.000	Canis_lupus_dingo
ENSHCOG00000013459	trmu	99	68.856	ENSCHIG00000017074	TRMU	99	68.856	Capra_hircus
ENSHCOG00000013459	trmu	96	72.040	ENSTSYG00000003853	TRMU	94	72.040	Carlito_syrichta
ENSHCOG00000013459	trmu	96	65.542	ENSCAPG00000013034	TRMU	97	65.542	Cavia_aperea
ENSHCOG00000013459	trmu	99	69.586	ENSCPOG00000020780	TRMU	98	69.586	Cavia_porcellus
ENSHCOG00000013459	trmu	99	68.765	ENSCCAG00000021641	TRMU	98	68.765	Cebus_capucinus
ENSHCOG00000013459	trmu	99	68.447	ENSCATG00000032800	TRMU	98	68.447	Cercocebus_atys
ENSHCOG00000013459	trmu	96	72.544	ENSCLAG00000017269	TRMU	94	72.544	Chinchilla_lanigera
ENSHCOG00000013459	trmu	99	68.689	ENSCSAG00000005279	TRMU	98	68.689	Chlorocebus_sabaeus
ENSHCOG00000013459	trmu	92	71.802	ENSCPBG00000011621	TRMU	96	71.802	Chrysemys_picta_bellii
ENSHCOG00000013459	trmu	92	48.825	ENSCING00000019371	-	94	48.825	Ciona_intestinalis
ENSHCOG00000013459	trmu	99	68.689	ENSCANG00000041645	TRMU	98	68.689	Colobus_angolensis_palliatus
ENSHCOG00000013459	trmu	96	71.285	ENSCGRG00001001739	Trmu	95	71.285	Cricetulus_griseus_chok1gshd
ENSHCOG00000013459	trmu	96	65.995	ENSCGRG00000002781	Trmu	95	65.995	Cricetulus_griseus_crigri
ENSHCOG00000013459	trmu	99	79.518	ENSCSEG00000012382	trmu	99	79.518	Cynoglossus_semilaevis
ENSHCOG00000013459	trmu	99	85.783	ENSCVAG00000001366	trmu	99	85.783	Cyprinodon_variegatus
ENSHCOG00000013459	trmu	99	75.121	ENSDARG00000043734	trmu	99	75.121	Danio_rerio
ENSHCOG00000013459	trmu	55	63.436	ENSDNOG00000047245	-	83	61.603	Dasypus_novemcinctus
ENSHCOG00000013459	trmu	99	69.586	ENSDORG00000007455	Trmu	100	69.586	Dipodomys_ordii
ENSHCOG00000013459	trmu	93	44.560	FBgn0040337	CG3021	99	43.392	Drosophila_melanogaster
ENSHCOG00000013459	trmu	95	56.281	ENSEBUG00000007454	trmu	99	56.281	Eptatretus_burgeri
ENSHCOG00000013459	trmu	96	71.500	ENSEASG00005021725	TRMU	95	71.500	Equus_asinus_asinus
ENSHCOG00000013459	trmu	96	71.500	ENSECAG00000000467	TRMU	95	71.500	Equus_caballus
ENSHCOG00000013459	trmu	68	54.577	ENSEEUG00000000074	-	74	81.481	Erinaceus_europaeus
ENSHCOG00000013459	trmu	99	79.036	ENSELUG00000009464	trmu	99	82.065	Esox_lucius
ENSHCOG00000013459	trmu	96	72.040	ENSFCAG00000006533	TRMU	94	72.040	Felis_catus
ENSHCOG00000013459	trmu	93	70.483	ENSFALG00000010035	TRMU	97	70.483	Ficedula_albicollis
ENSHCOG00000013459	trmu	92	69.191	ENSFDAG00000017472	TRMU	97	69.191	Fukomys_damarensis
ENSHCOG00000013459	trmu	99	84.096	ENSFHEG00000003162	trmu	98	86.376	Fundulus_heteroclitus
ENSHCOG00000013459	trmu	97	71.990	ENSGMOG00000001323	trmu	99	71.990	Gadus_morhua
ENSHCOG00000013459	trmu	99	71.770	ENSGALG00000031922	TRMU	99	71.770	Gallus_gallus
ENSHCOG00000013459	trmu	99	85.366	ENSGAFG00000013331	trmu	98	85.366	Gambusia_affinis
ENSHCOG00000013459	trmu	99	81.280	ENSGACG00000019024	trmu	99	81.280	Gasterosteus_aculeatus
ENSHCOG00000013459	trmu	99	69.175	ENSGGOG00000000203	TRMU	98	69.175	Gorilla_gorilla
ENSHCOG00000013459	trmu	99	84.300	ENSHBUG00000023421	trmu	98	86.179	Haplochromis_burtoni
ENSHCOG00000013459	trmu	99	68.613	ENSHGLG00000009278	TRMU	98	68.613	Heterocephalus_glaber_female
ENSHCOG00000013459	trmu	99	68.613	ENSHGLG00100018863	TRMU	98	68.613	Heterocephalus_glaber_male
ENSHCOG00000013459	trmu	96	81.864	ENSIPUG00000009785	trmu	98	81.864	Ictalurus_punctatus
ENSHCOG00000013459	trmu	96	72.040	ENSSTOG00000010993	TRMU	94	72.040	Ictidomys_tridecemlineatus
ENSHCOG00000013459	trmu	99	68.856	ENSJJAG00000000667	Trmu	99	68.856	Jaculus_jaculus
ENSHCOG00000013459	trmu	99	82.367	ENSKMAG00000008516	trmu	99	82.367	Kryptolebias_marmoratus
ENSHCOG00000013459	trmu	99	83.614	ENSLBEG00000018831	trmu	99	83.614	Labrus_bergylta
ENSHCOG00000013459	trmu	99	76.386	ENSLACG00000013713	TRMU	99	76.386	Latimeria_chalumnae
ENSHCOG00000013459	trmu	97	80.693	ENSLOCG00000016066	trmu	97	80.693	Lepisosteus_oculatus
ENSHCOG00000013459	trmu	96	62.531	ENSLAFG00000005129	TRMU	96	62.531	Loxodonta_africana
ENSHCOG00000013459	trmu	99	68.689	ENSMFAG00000039767	TRMU	98	68.689	Macaca_fascicularis
ENSHCOG00000013459	trmu	99	68.689	ENSMMUG00000000807	TRMU	98	68.689	Macaca_mulatta
ENSHCOG00000013459	trmu	99	68.689	ENSMNEG00000028164	TRMU	98	68.689	Macaca_nemestrina
ENSHCOG00000013459	trmu	99	68.447	ENSMLEG00000033884	TRMU	98	68.447	Mandrillus_leucophaeus
ENSHCOG00000013459	trmu	99	84.783	ENSMAMG00000004717	trmu	99	84.783	Mastacembelus_armatus
ENSHCOG00000013459	trmu	99	84.783	ENSMZEG00005015797	trmu	99	84.783	Maylandia_zebra
ENSHCOG00000013459	trmu	80	70.381	ENSMGAG00000007550	TRMU	99	70.381	Meleagris_gallopavo
ENSHCOG00000013459	trmu	99	68.613	ENSMAUG00000022282	Trmu	99	68.613	Mesocricetus_auratus
ENSHCOG00000013459	trmu	96	71.537	ENSMICG00000029046	TRMU	96	71.537	Microcebus_murinus
ENSHCOG00000013459	trmu	96	70.750	ENSMOCG00000014641	Trmu	96	70.750	Microtus_ochrogaster
ENSHCOG00000013459	trmu	99	82.567	ENSMMOG00000007229	trmu	99	82.567	Mola_mola
ENSHCOG00000013459	trmu	99	65.144	ENSMODG00000007433	TRMU	97	65.144	Monodelphis_domestica
ENSHCOG00000013459	trmu	99	81.687	ENSMALG00000007721	trmu	99	81.687	Monopterus_albus
ENSHCOG00000013459	trmu	96	70.781	MGP_CAROLIEiJ_G0020134	Trmu	83	84.146	Mus_caroli
ENSHCOG00000013459	trmu	96	71.033	ENSMUSG00000022386	Trmu	83	84.146	Mus_musculus
ENSHCOG00000013459	trmu	96	70.781	MGP_PahariEiJ_G0020139	Trmu	83	84.146	Mus_pahari
ENSHCOG00000013459	trmu	96	71.033	MGP_SPRETEiJ_G0021031	Trmu	83	84.146	Mus_spretus
ENSHCOG00000013459	trmu	99	68.856	ENSMPUG00000002523	TRMU	98	68.856	Mustela_putorius_furo
ENSHCOG00000013459	trmu	99	69.734	ENSNGAG00000005132	Trmu	99	69.734	Nannospalax_galili
ENSHCOG00000013459	trmu	99	84.300	ENSNBRG00000022690	trmu	98	85.678	Neolamprologus_brichardi
ENSHCOG00000013459	trmu	99	69.175	ENSNLEG00000015773	TRMU	98	69.175	Nomascus_leucogenys
ENSHCOG00000013459	trmu	79	60.061	ENSMEUG00000000216	TRMU	99	60.061	Notamacropus_eugenii
ENSHCOG00000013459	trmu	99	69.492	ENSODEG00000014745	TRMU	99	69.492	Octodon_degus
ENSHCOG00000013459	trmu	99	84.541	ENSONIG00000009821	trmu	99	84.541	Oreochromis_niloticus
ENSHCOG00000013459	trmu	92	67.102	ENSOANG00000001891	TRMU	97	67.102	Ornithorhynchus_anatinus
ENSHCOG00000013459	trmu	89	70.811	ENSOCUG00000003664	TRMU	93	69.588	Oryctolagus_cuniculus
ENSHCOG00000013459	trmu	100	78.072	ENSORLG00000019015	trmu	100	78.072	Oryzias_latipes
ENSHCOG00000013459	trmu	100	78.554	ENSORLG00020006830	trmu	100	78.554	Oryzias_latipes_hni
ENSHCOG00000013459	trmu	100	78.554	ENSORLG00015003907	trmu	100	78.554	Oryzias_latipes_hsok
ENSHCOG00000013459	trmu	54	83.556	ENSOMEG00000015541	trmu	81	83.556	Oryzias_melastigma
ENSHCOG00000013459	trmu	96	70.781	ENSOGAG00000008096	TRMU	95	70.781	Otolemur_garnettii
ENSHCOG00000013459	trmu	92	68.158	ENSOARG00000019475	TRMU	93	68.158	Ovis_aries
ENSHCOG00000013459	trmu	99	68.932	ENSPPAG00000033944	TRMU	98	68.932	Pan_paniscus
ENSHCOG00000013459	trmu	97	70.968	ENSPPRG00000004197	TRMU	98	69.830	Panthera_pardus
ENSHCOG00000013459	trmu	67	71.841	ENSPTIG00000014122	TRMU	97	73.485	Panthera_tigris_altaica
ENSHCOG00000013459	trmu	99	68.932	ENSPTRG00000014510	TRMU	98	68.932	Pan_troglodytes
ENSHCOG00000013459	trmu	95	70.633	ENSPANG00000023074	TRMU	97	68.493	Papio_anubis
ENSHCOG00000013459	trmu	99	76.329	ENSPKIG00000002849	trmu	99	76.329	Paramormyrops_kingsleyae
ENSHCOG00000013459	trmu	90	72.800	ENSPSIG00000013020	TRMU	98	72.800	Pelodiscus_sinensis
ENSHCOG00000013459	trmu	99	84.578	ENSPMGG00000004083	trmu	99	84.578	Periophthalmus_magnuspinnatus
ENSHCOG00000013459	trmu	99	69.343	ENSPEMG00000014007	Trmu	99	69.343	Peromyscus_maniculatus_bairdii
ENSHCOG00000013459	trmu	95	67.595	ENSPCIG00000009923	TRMU	94	67.419	Phascolarctos_cinereus
ENSHCOG00000013459	trmu	97	81.481	ENSPFOG00000008197	trmu	91	81.481	Poecilia_formosa
ENSHCOG00000013459	trmu	99	84.819	ENSPLAG00000008414	trmu	99	84.819	Poecilia_latipinna
ENSHCOG00000013459	trmu	99	85.060	ENSPMEG00000004326	trmu	99	85.060	Poecilia_mexicana
ENSHCOG00000013459	trmu	99	84.819	ENSPREG00000007980	trmu	99	84.819	Poecilia_reticulata
ENSHCOG00000013459	trmu	99	69.175	ENSPPYG00000011949	TRMU	98	69.175	Pongo_abelii
ENSHCOG00000013459	trmu	89	64.499	ENSPCAG00000013462	TRMU	95	64.499	Procavia_capensis
ENSHCOG00000013459	trmu	96	71.285	ENSPCOG00000016539	TRMU	95	71.285	Propithecus_coquereli
ENSHCOG00000013459	trmu	96	64.750	ENSPVAG00000013202	TRMU	96	64.750	Pteropus_vampyrus
ENSHCOG00000013459	trmu	99	84.300	ENSPNYG00000005629	trmu	99	84.300	Pundamilia_nyererei
ENSHCOG00000013459	trmu	99	78.398	ENSPNAG00000006339	trmu	97	78.398	Pygocentrus_nattereri
ENSHCOG00000013459	trmu	96	70.529	ENSRNOG00000016465	Trmu	95	70.529	Rattus_norvegicus
ENSHCOG00000013459	trmu	99	68.204	ENSRBIG00000038973	TRMU	98	68.204	Rhinopithecus_bieti
ENSHCOG00000013459	trmu	99	68.447	ENSRROG00000004267	TRMU	98	68.447	Rhinopithecus_roxellana
ENSHCOG00000013459	trmu	93	33.007	YDL033C	SLM3	93	33.007	Saccharomyces_cerevisiae
ENSHCOG00000013459	trmu	99	69.417	ENSSBOG00000030184	TRMU	98	69.417	Saimiri_boliviensis_boliviensis
ENSHCOG00000013459	trmu	91	75.000	ENSSFOG00015020664	trmu	99	75.000	Scleropages_formosus
ENSHCOG00000013459	trmu	99	83.051	ENSSMAG00000019450	trmu	99	83.051	Scophthalmus_maximus
ENSHCOG00000013459	trmu	99	85.301	ENSSDUG00000011913	trmu	99	85.301	Seriola_dumerili
ENSHCOG00000013459	trmu	99	85.060	ENSSLDG00000011684	trmu	99	85.060	Seriola_lalandi_dorsalis
ENSHCOG00000013459	trmu	95	62.087	ENSSPUG00000017123	TRMU	93	62.087	Sphenodon_punctatus
ENSHCOG00000013459	trmu	99	80.918	ENSSPAG00000021875	trmu	99	80.918	Stegastes_partitus
ENSHCOG00000013459	trmu	97	70.223	ENSSSCG00000000007	TRMU	96	70.223	Sus_scrofa
ENSHCOG00000013459	trmu	89	73.046	ENSTGUG00000003663	-	99	73.046	Taeniopygia_guttata
ENSHCOG00000013459	trmu	99	85.819	ENSTRUG00000001231	trmu	99	85.819	Takifugu_rubripes
ENSHCOG00000013459	trmu	100	82.775	ENSTNIG00000010484	trmu	99	82.775	Tetraodon_nigroviridis
ENSHCOG00000013459	trmu	71	56.637	ENSTBEG00000011276	-	75	56.637	Tupaia_belangeri
ENSHCOG00000013459	trmu	95	72.010	ENSTTRG00000004160	TRMU	93	72.010	Tursiops_truncatus
ENSHCOG00000013459	trmu	71	72.881	ENSUAMG00000024825	TRMU	98	72.881	Ursus_americanus
ENSHCOG00000013459	trmu	95	58.987	ENSUMAG00000019079	TRMU	97	73.152	Ursus_maritimus
ENSHCOG00000013459	trmu	53	63.014	ENSVPAG00000000685	-	100	63.014	Vicugna_pacos
ENSHCOG00000013459	trmu	99	68.613	ENSVVUG00000024963	TRMU	98	68.613	Vulpes_vulpes
ENSHCOG00000013459	trmu	96	75.377	ENSXETG00000023304	trmu	93	75.377	Xenopus_tropicalis
ENSHCOG00000013459	trmu	99	83.254	ENSXCOG00000015105	trmu	99	83.254	Xiphophorus_couchianus
ENSHCOG00000013459	trmu	99	85.542	ENSXMAG00000006697	trmu	99	85.542	Xiphophorus_maculatus