EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000013919 (Gene tree)
Gene ID
109516157
Gene Symbol
rab23
Alias
zgc:110261
Full Name
RAB23%2C member RAS oncogene family
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
2352 bases
Position
chrKV879954.1:625762-628113
Accession
109516157
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000011147MMR_HSR1PF01926.232.3e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000017784-615XM_019870428ENSHCOP00000011147204 (aa)XP_019725987-
Gene Model
Click here to download ENSHCOG00000013919's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000013919's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000013919rab238337.356ENSHCOG00000004225-7337.584
ENSHCOG00000013919rab237135.762ENSHCOG00000012834-5933.813
ENSHCOG00000013919rab237938.650ENSHCOG00000017123-6740.278
ENSHCOG00000013919rab237135.374ENSHCOG00000013807rheb7335.294
ENSHCOG00000013919rab239330.732ENSHCOG00000019709rasl11a6132.026
ENSHCOG00000013919rab238930.653ENSHCOG00000019224rab146435.507
ENSHCOG00000013919rab237635.669ENSHCOG00000014428rab2a6835.862
ENSHCOG00000013919rab239634.466ENSHCOG00000016322RAB7A7137.584
ENSHCOG00000013919rab237437.500ENSHCOG00000003667rhebl17636.879
ENSHCOG00000013919rab237536.774ENSHCOG00000013095rab25a6735.664
ENSHCOG00000013919rab237336.364ENSHCOG00000004086rab9a7035.211
ENSHCOG00000013919rab239332.683ENSHCOG00000005652rab11a6737.241
ENSHCOG00000013919rab237734.375ENSHCOG00000003981RAB39B6934.459
ENSHCOG00000013919rab237436.842ENSHCOG00000004404rab416636.429
ENSHCOG00000013919rab239033.511ENSHCOG00000000232rab11al6434.783
ENSHCOG00000013919rab237434.868ENSHCOG00000020238-6433.571
ENSHCOG00000013919rab237934.969ENSHCOG00000000954-6935.417
ENSHCOG00000013919rab237435.526ENSHCOG00000004662rab5c6334.286
ENSHCOG00000013919rab236531.618ENSHCOG00000018456si:ch73-116o1.26731.915
ENSHCOG00000013919rab237436.129ENSHCOG00000005024rab9b7134.965
ENSHCOG00000013919rab237432.903ENSHCOG00000005802RAB9A6831.034
ENSHCOG00000013919rab237030.556ENSHCOG00000011080kras7630.556
ENSHCOG00000013919rab239831.683ENSHCOG00000019468rab1ba6936.957
ENSHCOG00000013919rab239932.692ENSHCOG00000002217rab18b7535.714
ENSHCOG00000013919rab238138.554ENSHCOG00000007187rab25b6239.310
ENSHCOG00000013919rab238430.899ENSHCOG00000004726rab33a5830.882
ENSHCOG00000013919rab238330.588ENSHCOG00000001145rab22a7230.714
ENSHCOG00000013919rab237935.583ENSHCOG00000002423rab11bb6636.111
ENSHCOG00000013919rab236935.211ENSHCOG00000002043rras27035.211
ENSHCOG00000013919rab238333.529ENSHCOG00000010023-6935.461
ENSHCOG00000013919rab237632.051ENSHCOG00000009757ran7132.051
ENSHCOG00000013919rab237432.911ENSHCOG00000015692si:dkey-34d22.56633.562
ENSHCOG00000013919rab239831.034ENSHCOG00000001137rab1ab6836.232
ENSHCOG00000013919rab238131.609ENSHCOG00000017086RAB156433.333
ENSHCOG00000013919rab237933.537ENSHCOG00000003569rab33ba5634.074
ENSHCOG00000013919rab237436.076ENSHCOG00000012376rab125836.986
ENSHCOG00000013919rab239433.990ENSHCOG00000020527rab34a5536.301
ENSHCOG00000013919rab239636.181ENSHCOG00000007440rab139036.364
ENSHCOG00000013919rab237438.158ENSHCOG00000006550-6737.857
ENSHCOG00000013919rab239434.184ENSHCOG00000013130rab6bb6739.286
ENSHCOG00000013919rab237335.526ENSHCOG00000019732-6635.714
ENSHCOG00000013919rab238533.908ENSHCOG00000000985-7135.417
ENSHCOG00000013919rab235838.333ENSHCOG00000010707rab306538.333
ENSHCOG00000013919rab239434.184ENSHCOG00000014711rab6ba6739.286
ENSHCOG00000013919rab237135.811ENSHCOG00000009133zgc:1015595835.294
ENSHCOG00000013919rab237834.375ENSHCOG00000006538si:dkey-16l2.166735.252
ENSHCOG00000013919rab237534.839ENSHCOG00000013180-6535.714
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000013919rab239970.763ENSG00000112210RAB239970.339Homo_sapiens
ENSHCOG00000013919rab2310080.000ENSAPOG00000008892rab2310080.000Acanthochromis_polyacanthus
ENSHCOG00000013919rab239971.186ENSAMEG00000006825RAB239970.763Ailuropoda_melanoleuca
ENSHCOG00000013919rab2310092.647ENSACIG00000020496rab2310092.157Amphilophus_citrinellus
ENSHCOG00000013919rab2310092.647ENSAOCG00000004234rab2310092.647Amphiprion_ocellaris
ENSHCOG00000013919rab2310092.647ENSAPEG00000019758rab2310092.647Amphiprion_percula
ENSHCOG00000013919rab2310092.647ENSATEG00000020913rab2310092.647Anabas_testudineus
ENSHCOG00000013919rab237889.375ENSAPLG00000003715RAB239089.375Anas_platyrhynchos
ENSHCOG00000013919rab239969.620ENSACAG00000006656RAB239968.776Anolis_carolinensis
ENSHCOG00000013919rab239970.763ENSANAG00000027052-9970.763Aotus_nancymaae
ENSHCOG00000013919rab2310081.277ENSACLG00000002819rab2310081.277Astatotilapia_calliptera
ENSHCOG00000013919rab2310087.864ENSAMXG00000014960rab2310087.864Astyanax_mexicanus
ENSHCOG00000013919rab239969.492ENSBTAG00000005362RAB239969.068Bos_taurus
ENSHCOG00000013919rab239970.763ENSCJAG00000010247RAB239970.763Callithrix_jacchus
ENSHCOG00000013919rab239971.186ENSCAFG00000002459RAB239970.763Canis_familiaris
ENSHCOG00000013919rab239971.186ENSCAFG00020015900RAB239970.763Canis_lupus_dingo
ENSHCOG00000013919rab239969.492ENSCHIG00000009815RAB239969.068Capra_hircus
ENSHCOG00000013919rab2310071.308ENSTSYG00000029126RAB2310070.886Carlito_syrichta
ENSHCOG00000013919rab239969.787ENSCPOG00000030218RAB239969.787Cavia_porcellus
ENSHCOG00000013919rab239970.339ENSCCAG00000020364RAB239970.339Cebus_capucinus
ENSHCOG00000013919rab239971.186ENSCATG00000027876RAB239970.763Cercocebus_atys
ENSHCOG00000013919rab239969.915ENSCLAG00000000797RAB239969.068Chinchilla_lanigera
ENSHCOG00000013919rab239970.763ENSCSAG00000013438RAB239970.339Chlorocebus_sabaeus
ENSHCOG00000013919rab239971.186ENSCPBG00000022640RAB239971.186Chrysemys_picta_bellii
ENSHCOG00000013919rab2310061.317ENSCING00000001155-10060.905Ciona_intestinalis
ENSHCOG00000013919rab237878.261ENSCSAVG00000001356-6778.261Ciona_savignyi
ENSHCOG00000013919rab239970.339ENSCANG00000031065RAB239969.915Colobus_angolensis_palliatus
ENSHCOG00000013919rab239971.186ENSCGRG00001008994Rab239970.763Cricetulus_griseus_chok1gshd
ENSHCOG00000013919rab239970.213ENSCGRG00000013630Rab239969.787Cricetulus_griseus_crigri
ENSHCOG00000013919rab2310090.686ENSCSEG00000010565rab2310090.686Cynoglossus_semilaevis
ENSHCOG00000013919rab2310090.686ENSCVAG00000020501rab2310090.686Cyprinodon_variegatus
ENSHCOG00000013919rab2310074.684ENSDARG00000004151rab2310074.684Danio_rerio
ENSHCOG00000013919rab239969.915ENSDNOG00000015501RAB239969.915Dasypus_novemcinctus
ENSHCOG00000013919rab2310070.763ENSDORG00000028344Rab2310070.763Dipodomys_ordii
ENSHCOG00000013919rab237773.418FBgn0037364Rab235973.418Drosophila_melanogaster
ENSHCOG00000013919rab239757.391ENSEBUG00000010861-9257.391Eptatretus_burgeri
ENSHCOG00000013919rab239970.339ENSEASG00005003529RAB239970.339Equus_asinus_asinus
ENSHCOG00000013919rab239971.186ENSECAG00000013427RAB239970.763Equus_caballus
ENSHCOG00000013919rab2310070.464ENSEEUG00000015045RAB2310069.620Erinaceus_europaeus
ENSHCOG00000013919rab2310077.447ENSELUG00000020788rab2310077.447Esox_lucius
ENSHCOG00000013919rab239971.610ENSFCAG00000044358RAB239971.186Felis_catus
ENSHCOG00000013919rab239970.339ENSFALG00000001708RAB239969.915Ficedula_albicollis
ENSHCOG00000013919rab239969.492ENSFDAG00000014834RAB239969.492Fukomys_damarensis
ENSHCOG00000013919rab2310079.574ENSFHEG00000023069rab2310079.574Fundulus_heteroclitus
ENSHCOG00000013919rab2310078.298ENSGMOG00000005102rab2310078.298Gadus_morhua
ENSHCOG00000013919rab239971.186ENSGALG00000016279RAB239970.763Gallus_gallus
ENSHCOG00000013919rab2310091.667ENSGAFG00000007684rab2310091.667Gambusia_affinis
ENSHCOG00000013919rab2310079.574ENSGACG00000006151rab2310079.574Gasterosteus_aculeatus
ENSHCOG00000013919rab239971.610ENSGAGG00000012709RAB239971.610Gopherus_agassizii
ENSHCOG00000013919rab2310093.627ENSHBUG00000007966rab2310093.627Haplochromis_burtoni
ENSHCOG00000013919rab239957.500ENSHGLG00000009371-9955.000Heterocephalus_glaber_female
ENSHCOG00000013919rab239971.186ENSHGLG00000013030-9970.763Heterocephalus_glaber_female
ENSHCOG00000013919rab239957.500ENSHGLG00100017177-9955.000Heterocephalus_glaber_male
ENSHCOG00000013919rab239971.186ENSHGLG00100005945-9970.763Heterocephalus_glaber_male
ENSHCOG00000013919rab2310085.922ENSIPUG00000016494rab2310085.922Ictalurus_punctatus
ENSHCOG00000013919rab239971.610ENSSTOG00000010962RAB239971.186Ictidomys_tridecemlineatus
ENSHCOG00000013919rab239970.339ENSJJAG00000020094Rab239970.339Jaculus_jaculus
ENSHCOG00000013919rab2310079.149ENSKMAG00000018270rab2310079.149Kryptolebias_marmoratus
ENSHCOG00000013919rab2310092.647ENSLBEG00000013176rab2310092.647Labrus_bergylta
ENSHCOG00000013919rab2310073.418ENSLACG00000004025RAB2310072.996Latimeria_chalumnae
ENSHCOG00000013919rab2310072.500ENSLOCG00000016999rab2310072.500Lepisosteus_oculatus
ENSHCOG00000013919rab239971.610ENSLAFG00000007209RAB239971.186Loxodonta_africana
ENSHCOG00000013919rab239971.186ENSMFAG00000032369RAB239970.763Macaca_fascicularis
ENSHCOG00000013919rab239971.186ENSMMUG00000018003RAB239970.763Macaca_mulatta
ENSHCOG00000013919rab239971.186ENSMNEG00000037012RAB239970.763Macaca_nemestrina
ENSHCOG00000013919rab239971.186ENSMLEG00000042429RAB239970.763Mandrillus_leucophaeus
ENSHCOG00000013919rab2310090.686ENSMAMG00000015456rab2310090.686Mastacembelus_armatus
ENSHCOG00000013919rab2310093.627ENSMZEG00005005441rab2310093.627Maylandia_zebra
ENSHCOG00000013919rab239971.610ENSMGAG00000013882RAB239971.186Meleagris_gallopavo
ENSHCOG00000013919rab239971.610ENSMICG00000014037RAB239971.186Microcebus_murinus
ENSHCOG00000013919rab239970.339ENSMOCG00000000444Rab239969.915Microtus_ochrogaster
ENSHCOG00000013919rab2310091.176ENSMMOG00000007703rab2310091.176Mola_mola
ENSHCOG00000013919rab239971.186ENSMODG00000018720RAB239970.763Monodelphis_domestica
ENSHCOG00000013919rab2310091.176ENSMALG00000002136rab2310091.176Monopterus_albus
ENSHCOG00000013919rab239971.186MGP_CAROLIEiJ_G0014015Rab239970.763Mus_caroli
ENSHCOG00000013919rab239970.763ENSMUSG00000004768Rab239970.339Mus_musculus
ENSHCOG00000013919rab239970.763MGP_PahariEiJ_G0027261Rab239970.339Mus_pahari
ENSHCOG00000013919rab239970.763MGP_SPRETEiJ_G0014820Rab239970.339Mus_spretus
ENSHCOG00000013919rab239970.464ENSMPUG00000002642RAB239970.042Mustela_putorius_furo
ENSHCOG00000013919rab239971.610ENSMLUG00000004058RAB239970.763Myotis_lucifugus
ENSHCOG00000013919rab239969.915ENSNGAG00000018038Rab239969.915Nannospalax_galili
ENSHCOG00000013919rab2310093.627ENSNBRG00000013691rab2310093.627Neolamprologus_brichardi
ENSHCOG00000013919rab239971.186ENSNLEG00000027830RAB239970.763Nomascus_leucogenys
ENSHCOG00000013919rab239970.339ENSODEG00000016056RAB239969.915Octodon_degus
ENSHCOG00000013919rab2310080.508ENSONIG00000009749rab2310080.508Oreochromis_niloticus
ENSHCOG00000013919rab239971.610ENSOANG00000001398RAB239971.186Ornithorhynchus_anatinus
ENSHCOG00000013919rab239971.186ENSOCUG00000004816RAB239970.763Oryctolagus_cuniculus
ENSHCOG00000013919rab2310089.706ENSORLG00000010115rab2310089.706Oryzias_latipes
ENSHCOG00000013919rab2310089.706ENSORLG00020020220rab2310089.706Oryzias_latipes_hni
ENSHCOG00000013919rab2310089.706ENSORLG00015004033rab2310089.706Oryzias_latipes_hsok
ENSHCOG00000013919rab2310091.176ENSOMEG00000001706rab2310091.176Oryzias_melastigma
ENSHCOG00000013919rab239969.915ENSOGAG00000005675RAB239969.915Otolemur_garnettii
ENSHCOG00000013919rab239969.492ENSOARG00000005749RAB239969.068Ovis_aries
ENSHCOG00000013919rab239971.186ENSPPAG00000010023RAB239970.763Pan_paniscus
ENSHCOG00000013919rab239971.186ENSPPRG00000012453RAB239970.763Panthera_pardus
ENSHCOG00000013919rab239971.610ENSPTIG00000009435RAB239971.186Panthera_tigris_altaica
ENSHCOG00000013919rab239971.186ENSPTRG00000043341RAB239970.763Pan_troglodytes
ENSHCOG00000013919rab239971.186ENSPANG00000017772RAB239970.763Papio_anubis
ENSHCOG00000013919rab237893.125ENSPKIG00000024310rab237993.125Paramormyrops_kingsleyae
ENSHCOG00000013919rab239971.610ENSPSIG00000015579RAB239971.610Pelodiscus_sinensis
ENSHCOG00000013919rab2310089.216ENSPMGG00000008577rab2310087.255Periophthalmus_magnuspinnatus
ENSHCOG00000013919rab239970.339ENSPEMG00000023271Rab239969.915Peromyscus_maniculatus_bairdii
ENSHCOG00000013919rab2310059.402ENSPMAG00000006835-10059.402Petromyzon_marinus
ENSHCOG00000013919rab239971.610ENSPCIG00000007267RAB239971.186Phascolarctos_cinereus
ENSHCOG00000013919rab2310080.426ENSPFOG00000011493rab2310080.426Poecilia_formosa
ENSHCOG00000013919rab2310092.157ENSPLAG00000011697rab2310092.157Poecilia_latipinna
ENSHCOG00000013919rab2310092.157ENSPMEG00000017300rab2310092.157Poecilia_mexicana
ENSHCOG00000013919rab2310092.647ENSPREG00000022509rab2310092.647Poecilia_reticulata
ENSHCOG00000013919rab239971.186ENSPPYG00000016739RAB239970.763Pongo_abelii
ENSHCOG00000013919rab239971.610ENSPCOG00000028471RAB239971.186Propithecus_coquereli
ENSHCOG00000013919rab239970.763ENSPVAG00000017693RAB239970.763Pteropus_vampyrus
ENSHCOG00000013919rab2310093.627ENSPNYG00000019639rab2310093.627Pundamilia_nyererei
ENSHCOG00000013919rab2310087.379ENSPNAG00000024728rab2310087.379Pygocentrus_nattereri
ENSHCOG00000013919rab239971.186ENSRNOG00000012629Rab239970.763Rattus_norvegicus
ENSHCOG00000013919rab239969.710ENSRBIG00000030547RAB239969.295Rhinopithecus_bieti
ENSHCOG00000013919rab239971.186ENSRROG00000035920RAB239970.763Rhinopithecus_roxellana
ENSHCOG00000013919rab239970.339ENSSBOG00000033237RAB239970.339Saimiri_boliviensis_boliviensis
ENSHCOG00000013919rab239970.763ENSSHAG00000006379RAB239970.763Sarcophilus_harrisii
ENSHCOG00000013919rab2310087.864ENSSFOG00015012604rab2310087.379Scleropages_formosus
ENSHCOG00000013919rab2310091.667ENSSMAG00000006341rab2310091.667Scophthalmus_maximus
ENSHCOG00000013919rab2310093.137ENSSDUG00000023508rab2310093.137Seriola_dumerili
ENSHCOG00000013919rab2310093.137ENSSLDG00000000287rab2310093.137Seriola_lalandi_dorsalis
ENSHCOG00000013919rab239969.915ENSSARG00000013689RAB239969.915Sorex_araneus
ENSHCOG00000013919rab239972.034ENSSPUG00000006274RAB239971.610Sphenodon_punctatus
ENSHCOG00000013919rab2310092.647ENSSPAG00000010373rab2310092.647Stegastes_partitus
ENSHCOG00000013919rab239979.024ENSSSCG00000029539RAB239979.024Sus_scrofa
ENSHCOG00000013919rab239970.339ENSTGUG00000012794RAB239969.492Taeniopygia_guttata
ENSHCOG00000013919rab2310089.216ENSTRUG00000015697rab2310089.216Takifugu_rubripes
ENSHCOG00000013919rab2310078.205ENSTNIG00000016575rab2310078.205Tetraodon_nigroviridis
ENSHCOG00000013919rab239971.610ENSUAMG00000013367RAB239971.186Ursus_americanus
ENSHCOG00000013919rab239971.610ENSUMAG00000018629RAB239971.186Ursus_maritimus
ENSHCOG00000013919rab237861.875ENSVPAG00000006805RAB238461.875Vicugna_pacos
ENSHCOG00000013919rab239971.610ENSVVUG00000008535RAB239971.186Vulpes_vulpes
ENSHCOG00000013919rab2310065.126ENSXETG00000004449rab2310063.866Xenopus_tropicalis
ENSHCOG00000013919rab2310079.574ENSXCOG00000011864rab2310079.574Xiphophorus_couchianus
ENSHCOG00000013919rab2310080.000ENSXMAG00000009387rab2310080.000Xiphophorus_maculatus

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