EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000014046 (Gene tree)
Gene ID: 109520100
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1017 bases
Position: chrKV880082.1:521943-522959
Accession: 109520100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011273	MRP-S32	PF10210.9	5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000017933	-	564	XM_019877067	ENSHCOP00000011273	144 (aa)	XP_019732626	UPI00094ED11F

Gene Model

Click here to download ENSHCOG00000014046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014046	mrpl42	100	65.068	ENSAPOG00000010677	mrpl42	100	65.068	Acanthochromis_polyacanthus
ENSHCOG00000014046	mrpl42	100	67.586	ENSAOCG00000011620	mrpl42	100	67.586	Amphiprion_ocellaris
ENSHCOG00000014046	mrpl42	100	66.667	ENSAPEG00000019516	mrpl42	100	66.667	Amphiprion_percula
ENSHCOG00000014046	mrpl42	90	68.182	ENSATEG00000014106	mrpl42	100	68.182	Anabas_testudineus
ENSHCOG00000014046	mrpl42	67	72.917	ENSACAG00000012606	MRPL42	66	72.917	Anolis_carolinensis
ENSHCOG00000014046	mrpl42	100	65.753	ENSACLG00000026856	mrpl42	100	65.753	Astatotilapia_calliptera
ENSHCOG00000014046	mrpl42	88	49.206	ENSAMXG00000035149	mrpl42	85	49.206	Astyanax_mexicanus
ENSHCOG00000014046	mrpl42	99	59.155	ENSCSEG00000010067	mrpl42	98	59.155	Cynoglossus_semilaevis
ENSHCOG00000014046	mrpl42	100	65.068	ENSCVAG00000002612	mrpl42	100	65.068	Cyprinodon_variegatus
ENSHCOG00000014046	mrpl42	100	55.556	ENSDARG00000079391	mrpl42	100	55.556	Danio_rerio
ENSHCOG00000014046	mrpl42	67	46.078	ENSEBUG00000005581	mrpl42	76	46.078	Eptatretus_burgeri
ENSHCOG00000014046	mrpl42	99	64.828	ENSELUG00000001973	mrpl42	99	64.828	Esox_lucius
ENSHCOG00000014046	mrpl42	100	60.959	ENSFHEG00000018696	mrpl42	100	60.959	Fundulus_heteroclitus
ENSHCOG00000014046	mrpl42	67	73.958	ENSGMOG00000002972	mrpl42	99	73.958	Gadus_morhua
ENSHCOG00000014046	mrpl42	100	65.306	ENSGAFG00000018373	mrpl42	100	65.306	Gambusia_affinis
ENSHCOG00000014046	mrpl42	67	77.320	ENSGACG00000018811	mrpl42	100	77.320	Gasterosteus_aculeatus
ENSHCOG00000014046	mrpl42	100	65.753	ENSHBUG00000015960	mrpl42	100	65.753	Haplochromis_burtoni
ENSHCOG00000014046	mrpl42	83	51.613	ENSIPUG00000015395	mrpl42	84	51.613	Ictalurus_punctatus
ENSHCOG00000014046	mrpl42	100	65.278	ENSKMAG00000013671	mrpl42	100	65.278	Kryptolebias_marmoratus
ENSHCOG00000014046	mrpl42	100	62.329	ENSLBEG00000028618	mrpl42	99	62.329	Labrus_bergylta
ENSHCOG00000014046	mrpl42	100	67.361	ENSMAMG00000009737	mrpl42	100	67.361	Mastacembelus_armatus
ENSHCOG00000014046	mrpl42	100	65.753	ENSMZEG00005008545	mrpl42	96	65.753	Maylandia_zebra
ENSHCOG00000014046	mrpl42	84	68.033	ENSMMOG00000002317	mrpl42	78	68.033	Mola_mola
ENSHCOG00000014046	mrpl42	100	61.538	ENSMALG00000015794	mrpl42	96	61.538	Monopterus_albus
ENSHCOG00000014046	mrpl42	100	64.384	ENSNBRG00000003307	mrpl42	100	64.384	Neolamprologus_brichardi
ENSHCOG00000014046	mrpl42	100	65.753	ENSONIG00000011753	mrpl42	100	65.753	Oreochromis_niloticus
ENSHCOG00000014046	mrpl42	93	48.529	ENSOANG00000019984	-	92	48.529	Ornithorhynchus_anatinus
ENSHCOG00000014046	mrpl42	100	60.959	ENSORLG00000013500	mrpl42	85	60.959	Oryzias_latipes
ENSHCOG00000014046	mrpl42	100	61.644	ENSORLG00020000548	mrpl42	100	61.644	Oryzias_latipes_hni
ENSHCOG00000014046	mrpl42	100	62.069	ENSORLG00015016984	mrpl42	100	62.069	Oryzias_latipes_hsok
ENSHCOG00000014046	mrpl42	100	62.069	ENSOMEG00000010700	mrpl42	100	62.069	Oryzias_melastigma
ENSHCOG00000014046	mrpl42	100	58.904	ENSPKIG00000025457	mrpl42	100	58.904	Paramormyrops_kingsleyae
ENSHCOG00000014046	mrpl42	68	76.531	ENSPMGG00000019705	mrpl42	69	76.531	Periophthalmus_magnuspinnatus
ENSHCOG00000014046	mrpl42	82	51.240	ENSPMAG00000008091	mrpl42	77	51.240	Petromyzon_marinus
ENSHCOG00000014046	mrpl42	100	63.946	ENSPFOG00000016539	mrpl42	99	63.946	Poecilia_formosa
ENSHCOG00000014046	mrpl42	100	63.946	ENSPLAG00000001255	mrpl42	100	63.946	Poecilia_latipinna
ENSHCOG00000014046	mrpl42	100	63.946	ENSPMEG00000016462	mrpl42	100	63.946	Poecilia_mexicana
ENSHCOG00000014046	mrpl42	89	60.769	ENSPREG00000012053	mrpl42	95	60.769	Poecilia_reticulata
ENSHCOG00000014046	mrpl42	100	65.753	ENSPNYG00000009586	mrpl42	100	65.753	Pundamilia_nyererei
ENSHCOG00000014046	mrpl42	98	43.972	ENSPNAG00000020753	mrpl42	97	43.972	Pygocentrus_nattereri
ENSHCOG00000014046	mrpl42	100	66.438	ENSSMAG00000000262	mrpl42	100	66.438	Scophthalmus_maximus
ENSHCOG00000014046	mrpl42	100	71.233	ENSSDUG00000005949	mrpl42	100	71.233	Seriola_dumerili
ENSHCOG00000014046	mrpl42	100	71.034	ENSSLDG00000010159	mrpl42	100	71.034	Seriola_lalandi_dorsalis
ENSHCOG00000014046	mrpl42	100	65.068	ENSTRUG00000025949	mrpl42	99	65.068	Takifugu_rubripes
ENSHCOG00000014046	mrpl42	67	59.375	ENSXETG00000032902	mrpl42	77	59.375	Xenopus_tropicalis
ENSHCOG00000014046	mrpl42	100	59.722	ENSXCOG00000013875	mrpl42	98	59.722	Xiphophorus_couchianus