EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000014058 (Gene tree)
Gene ID: 109522801
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5782 bases
Position: chrKV880155.1:579697-585478
Accession: 109522801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011279	PRP3	PF08572.10	1e-76	1	1
ENSHCOP00000011279	PWI	PF01480.17	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026497	-	2713	XM_019881613	ENSHCOP00000011279	699 (aa)	XP_019737172	UPI00094E97E3

Gene Model

Click here to download ENSHCOG00000014058's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014058	prpf3	99	68.279	ENSG00000117360	PRPF3	100	68.563	Homo_sapiens
ENSHCOG00000014058	prpf3	100	82.764	ENSAPOG00000015584	prpf3	100	82.764	Acanthochromis_polyacanthus
ENSHCOG00000014058	prpf3	99	68.279	ENSAMEG00000001630	PRPF3	100	68.563	Ailuropoda_melanoleuca
ENSHCOG00000014058	prpf3	100	80.932	ENSACIG00000007876	prpf3	100	80.791	Amphilophus_citrinellus
ENSHCOG00000014058	prpf3	100	82.336	ENSAOCG00000011449	prpf3	100	82.336	Amphiprion_ocellaris
ENSHCOG00000014058	prpf3	100	82.336	ENSATEG00000023583	prpf3	100	81.909	Anabas_testudineus
ENSHCOG00000014058	prpf3	99	68.839	ENSAPLG00000002440	PRPF3	100	68.839	Anas_platyrhynchos
ENSHCOG00000014058	prpf3	99	67.660	ENSACAG00000003176	PRPF3	100	68.028	Anolis_carolinensis
ENSHCOG00000014058	prpf3	99	68.279	ENSANAG00000026138	PRPF3	100	68.563	Aotus_nancymaae
ENSHCOG00000014058	prpf3	100	80.830	ENSACLG00000020127	prpf3	100	80.687	Astatotilapia_calliptera
ENSHCOG00000014058	prpf3	100	76.880	ENSAMXG00000007306	prpf3	100	75.978	Astyanax_mexicanus
ENSHCOG00000014058	prpf3	99	68.279	ENSBTAG00000013946	PRPF3	100	68.563	Bos_taurus
ENSHCOG00000014058	prpf3	79	39.459	WBGene00010844	prp-3	81	38.989	Caenorhabditis_elegans
ENSHCOG00000014058	prpf3	99	68.279	ENSCJAG00000009926	PRPF3	100	68.563	Callithrix_jacchus
ENSHCOG00000014058	prpf3	99	68.279	ENSCAFG00000011820	PRPF3	100	68.563	Canis_familiaris
ENSHCOG00000014058	prpf3	81	67.549	ENSCAFG00020019653	PRPF3	100	68.078	Canis_lupus_dingo
ENSHCOG00000014058	prpf3	99	68.279	ENSCHIG00000015434	PRPF3	100	68.563	Capra_hircus
ENSHCOG00000014058	prpf3	99	68.421	ENSTSYG00000001383	PRPF3	100	68.706	Carlito_syrichta
ENSHCOG00000014058	prpf3	93	59.847	ENSCAPG00000017812	PRPF3	95	60.153	Cavia_aperea
ENSHCOG00000014058	prpf3	99	68.563	ENSCPOG00000008068	PRPF3	100	68.848	Cavia_porcellus
ENSHCOG00000014058	prpf3	99	68.279	ENSCCAG00000026380	PRPF3	100	68.563	Cebus_capucinus
ENSHCOG00000014058	prpf3	99	56.073	ENSCATG00000041778	PRPF3	100	56.356	Cercocebus_atys
ENSHCOG00000014058	prpf3	99	68.421	ENSCLAG00000015009	PRPF3	100	68.706	Chinchilla_lanigera
ENSHCOG00000014058	prpf3	76	81.250	ENSCHOG00000011645	PRPF3	75	80.882	Choloepus_hoffmanni
ENSHCOG00000014058	prpf3	99	68.706	ENSCPBG00000008216	PRPF3	100	68.990	Chrysemys_picta_bellii
ENSHCOG00000014058	prpf3	59	58.072	ENSCING00000003312	-	99	57.831	Ciona_intestinalis
ENSHCOG00000014058	prpf3	79	52.585	ENSCSAVG00000008720	-	94	52.763	Ciona_savignyi
ENSHCOG00000014058	prpf3	99	67.710	ENSCANG00000036769	PRPF3	100	67.994	Colobus_angolensis_palliatus
ENSHCOG00000014058	prpf3	99	68.279	ENSCGRG00001019100	Prpf3	100	68.563	Cricetulus_griseus_chok1gshd
ENSHCOG00000014058	prpf3	99	68.279	ENSCGRG00000007322	Prpf3	100	68.563	Cricetulus_griseus_crigri
ENSHCOG00000014058	prpf3	100	80.028	ENSCSEG00000002532	prpf3	100	79.606	Cynoglossus_semilaevis
ENSHCOG00000014058	prpf3	100	82.882	ENSCVAG00000009318	prpf3	100	82.596	Cyprinodon_variegatus
ENSHCOG00000014058	prpf3	100	76.379	ENSDARG00000086425	prpf3	100	75.672	Danio_rerio
ENSHCOG00000014058	prpf3	89	72.432	ENSDNOG00000005904	PRPF3	100	72.252	Dasypus_novemcinctus
ENSHCOG00000014058	prpf3	93	68.189	ENSDORG00000008664	Prpf3	99	68.598	Dipodomys_ordii
ENSHCOG00000014058	prpf3	79	51.693	FBgn0036915	Prp3	99	51.455	Drosophila_melanogaster
ENSHCOG00000014058	prpf3	99	68.697	ENSETEG00000019124	PRPF3	100	69.122	Echinops_telfairi
ENSHCOG00000014058	prpf3	99	59.517	ENSEBUG00000011680	prpf3	99	59.329	Eptatretus_burgeri
ENSHCOG00000014058	prpf3	99	68.137	ENSEASG00005001566	PRPF3	100	68.421	Equus_asinus_asinus
ENSHCOG00000014058	prpf3	99	68.279	ENSECAG00000019840	PRPF3	100	68.563	Equus_caballus
ENSHCOG00000014058	prpf3	84	71.882	ENSEEUG00000007338	PRPF3	85	71.655	Erinaceus_europaeus
ENSHCOG00000014058	prpf3	100	68.644	ENSELUG00000013624	prpf3	100	68.776	Esox_lucius
ENSHCOG00000014058	prpf3	99	68.279	ENSFCAG00000013940	PRPF3	100	68.563	Felis_catus
ENSHCOG00000014058	prpf3	99	68.706	ENSFDAG00000010365	PRPF3	100	68.990	Fukomys_damarensis
ENSHCOG00000014058	prpf3	100	82.571	ENSFHEG00000021746	prpf3	100	82.571	Fundulus_heteroclitus
ENSHCOG00000014058	prpf3	100	78.076	ENSGMOG00000008535	prpf3	100	78.076	Gadus_morhua
ENSHCOG00000014058	prpf3	99	68.980	ENSGALG00000028205	PRPF3	100	68.980	Gallus_gallus
ENSHCOG00000014058	prpf3	100	82.714	ENSGAFG00000012671	prpf3	100	82.143	Gambusia_affinis
ENSHCOG00000014058	prpf3	100	82.861	ENSGACG00000011792	prpf3	100	82.861	Gasterosteus_aculeatus
ENSHCOG00000014058	prpf3	99	68.706	ENSGAGG00000013765	PRPF3	100	72.662	Gopherus_agassizii
ENSHCOG00000014058	prpf3	86	76.106	ENSGGOG00000013174	PRPF3	100	75.811	Gorilla_gorilla
ENSHCOG00000014058	prpf3	100	81.402	ENSHBUG00000003493	prpf3	100	81.259	Haplochromis_burtoni
ENSHCOG00000014058	prpf3	99	50.427	ENSHGLG00000016033	-	100	50.071	Heterocephalus_glaber_female
ENSHCOG00000014058	prpf3	99	68.421	ENSHGLG00000016569	PRPF3	100	68.706	Heterocephalus_glaber_female
ENSHCOG00000014058	prpf3	99	68.421	ENSHGLG00100007590	PRPF3	100	68.706	Heterocephalus_glaber_male
ENSHCOG00000014058	prpf3	99	50.356	ENSHGLG00100008951	-	100	50.000	Heterocephalus_glaber_male
ENSHCOG00000014058	prpf3	100	76.771	ENSIPUG00000000902	PRPF3	100	75.527	Ictalurus_punctatus
ENSHCOG00000014058	prpf3	99	68.279	ENSSTOG00000001889	PRPF3	100	68.563	Ictidomys_tridecemlineatus
ENSHCOG00000014058	prpf3	100	81.624	ENSKMAG00000001390	prpf3	100	81.624	Kryptolebias_marmoratus
ENSHCOG00000014058	prpf3	100	83.428	ENSLBEG00000026310	prpf3	100	83.569	Labrus_bergylta
ENSHCOG00000014058	prpf3	93	63.374	ENSLACG00000010541	PRPF3	100	63.070	Latimeria_chalumnae
ENSHCOG00000014058	prpf3	99	68.279	ENSLAFG00000004713	PRPF3	100	68.563	Loxodonta_africana
ENSHCOG00000014058	prpf3	99	68.279	ENSMFAG00000039791	PRPF3	100	68.563	Macaca_fascicularis
ENSHCOG00000014058	prpf3	92	67.913	ENSMMUG00000016301	PRPF3	97	69.316	Macaca_mulatta
ENSHCOG00000014058	prpf3	99	68.279	ENSMNEG00000038161	PRPF3	100	68.563	Macaca_nemestrina
ENSHCOG00000014058	prpf3	99	46.991	ENSMLEG00000041065	-	98	46.848	Mandrillus_leucophaeus
ENSHCOG00000014058	prpf3	86	76.106	ENSMLEG00000040609	PRPF3	100	75.811	Mandrillus_leucophaeus
ENSHCOG00000014058	prpf3	100	82.153	ENSMAMG00000014968	prpf3	100	83.696	Mastacembelus_armatus
ENSHCOG00000014058	prpf3	100	81.754	ENSMZEG00005015970	prpf3	100	84.783	Maylandia_zebra
ENSHCOG00000014058	prpf3	99	68.980	ENSMGAG00000000707	PRPF3	100	68.980	Meleagris_gallopavo
ENSHCOG00000014058	prpf3	99	68.137	ENSMAUG00000017112	Prpf3	100	68.563	Mesocricetus_auratus
ENSHCOG00000014058	prpf3	99	68.137	ENSMICG00000015386	PRPF3	100	72.122	Microcebus_murinus
ENSHCOG00000014058	prpf3	99	68.137	ENSMOCG00000000242	Prpf3	100	68.421	Microtus_ochrogaster
ENSHCOG00000014058	prpf3	100	76.858	ENSMMOG00000016131	prpf3	100	76.297	Mola_mola
ENSHCOG00000014058	prpf3	99	68.563	ENSMODG00000018774	PRPF3	100	68.848	Monodelphis_domestica
ENSHCOG00000014058	prpf3	100	78.205	ENSMALG00000007257	prpf3	100	77.857	Monopterus_albus
ENSHCOG00000014058	prpf3	99	67.994	MGP_CAROLIEiJ_G0025354	Prpf3	100	68.279	Mus_caroli
ENSHCOG00000014058	prpf3	99	67.994	ENSMUSG00000015748	Prpf3	100	68.279	Mus_musculus
ENSHCOG00000014058	prpf3	99	68.040	MGP_PahariEiJ_G0026798	Prpf3	100	68.324	Mus_pahari
ENSHCOG00000014058	prpf3	99	67.994	MGP_SPRETEiJ_G0026298	Prpf3	100	68.279	Mus_spretus
ENSHCOG00000014058	prpf3	99	66.714	ENSMPUG00000005080	PRPF3	100	66.999	Mustela_putorius_furo
ENSHCOG00000014058	prpf3	99	68.466	ENSMLUG00000004646	-	100	68.750	Myotis_lucifugus
ENSHCOG00000014058	prpf3	99	68.279	ENSNGAG00000000910	Prpf3	100	68.563	Nannospalax_galili
ENSHCOG00000014058	prpf3	100	80.559	ENSNBRG00000003462	prpf3	100	80.559	Neolamprologus_brichardi
ENSHCOG00000014058	prpf3	90	68.839	ENSNLEG00000009841	PRPF3	99	69.316	Nomascus_leucogenys
ENSHCOG00000014058	prpf3	83	62.537	ENSMEUG00000008733	PRPF3	89	62.242	Notamacropus_eugenii
ENSHCOG00000014058	prpf3	99	68.130	ENSOPRG00000010139	PRPF3	100	68.414	Ochotona_princeps
ENSHCOG00000014058	prpf3	99	51.690	ENSODEG00000014412	-	100	51.690	Octodon_degus
ENSHCOG00000014058	prpf3	99	68.279	ENSODEG00000011363	-	100	68.563	Octodon_degus
ENSHCOG00000014058	prpf3	100	82.037	ENSONIG00000006394	prpf3	100	82.037	Oreochromis_niloticus
ENSHCOG00000014058	prpf3	99	53.058	ENSOANG00000015441	PRPF3	100	52.707	Ornithorhynchus_anatinus
ENSHCOG00000014058	prpf3	99	68.279	ENSOCUG00000011760	PRPF3	100	68.563	Oryctolagus_cuniculus
ENSHCOG00000014058	prpf3	100	82.286	ENSORLG00000010330	prpf3	100	81.571	Oryzias_latipes
ENSHCOG00000014058	prpf3	100	82.429	ENSORLG00020009054	prpf3	100	81.571	Oryzias_latipes_hni
ENSHCOG00000014058	prpf3	100	82.000	ENSORLG00015015016	prpf3	100	81.143	Oryzias_latipes_hsok
ENSHCOG00000014058	prpf3	100	82.976	ENSOMEG00000000940	prpf3	100	82.546	Oryzias_melastigma
ENSHCOG00000014058	prpf3	99	64.681	ENSOGAG00000005352	PRPF3	100	64.965	Otolemur_garnettii
ENSHCOG00000014058	prpf3	99	68.279	ENSOARG00000020798	PRPF3	100	68.563	Ovis_aries
ENSHCOG00000014058	prpf3	99	68.279	ENSPPAG00000030983	PRPF3	100	68.563	Pan_paniscus
ENSHCOG00000014058	prpf3	98	53.468	ENSPPAG00000043769	-	99	52.814	Pan_paniscus
ENSHCOG00000014058	prpf3	99	68.279	ENSPPRG00000000731	PRPF3	100	68.563	Panthera_pardus
ENSHCOG00000014058	prpf3	99	68.279	ENSPTIG00000005516	PRPF3	100	68.563	Panthera_tigris_altaica
ENSHCOG00000014058	prpf3	99	68.279	ENSPTRG00000001254	PRPF3	100	68.563	Pan_troglodytes
ENSHCOG00000014058	prpf3	98	52.601	ENSPTRG00000047819	-	99	51.948	Pan_troglodytes
ENSHCOG00000014058	prpf3	99	68.421	ENSPANG00000000499	PRPF3	100	68.706	Papio_anubis
ENSHCOG00000014058	prpf3	100	77.369	ENSPKIG00000010501	prpf3	100	76.945	Paramormyrops_kingsleyae
ENSHCOG00000014058	prpf3	99	69.088	ENSPSIG00000014877	PRPF3	100	69.088	Pelodiscus_sinensis
ENSHCOG00000014058	prpf3	100	72.688	ENSPMGG00000007776	prpf3	100	81.522	Periophthalmus_magnuspinnatus
ENSHCOG00000014058	prpf3	99	68.279	ENSPEMG00000011672	Prpf3	100	68.563	Peromyscus_maniculatus_bairdii
ENSHCOG00000014058	prpf3	61	70.439	ENSPMAG00000005588	prpf3	96	70.439	Petromyzon_marinus
ENSHCOG00000014058	prpf3	99	68.563	ENSPCIG00000008795	PRPF3	100	68.848	Phascolarctos_cinereus
ENSHCOG00000014058	prpf3	100	82.295	ENSPFOG00000013638	prpf3	100	81.586	Poecilia_formosa
ENSHCOG00000014058	prpf3	100	82.571	ENSPLAG00000018103	prpf3	100	81.857	Poecilia_latipinna
ENSHCOG00000014058	prpf3	100	82.714	ENSPMEG00000023546	prpf3	100	82.000	Poecilia_mexicana
ENSHCOG00000014058	prpf3	100	83.000	ENSPREG00000017216	prpf3	100	82.286	Poecilia_reticulata
ENSHCOG00000014058	prpf3	76	59.850	ENSPPYG00000018646	-	99	59.888	Pongo_abelii
ENSHCOG00000014058	prpf3	93	67.176	ENSPPYG00000000900	PRPF3	99	67.481	Pongo_abelii
ENSHCOG00000014058	prpf3	87	69.722	ENSPCAG00000014908	PRPF3	87	70.049	Procavia_capensis
ENSHCOG00000014058	prpf3	99	68.137	ENSPCOG00000013828	PRPF3	100	68.421	Propithecus_coquereli
ENSHCOG00000014058	prpf3	99	67.847	ENSPVAG00000013472	PRPF3	100	68.130	Pteropus_vampyrus
ENSHCOG00000014058	prpf3	100	81.259	ENSPNYG00000004279	prpf3	100	81.116	Pundamilia_nyererei
ENSHCOG00000014058	prpf3	100	76.117	ENSPNAG00000001799	prpf3	100	83.696	Pygocentrus_nattereri
ENSHCOG00000014058	prpf3	99	68.137	ENSRNOG00000025629	Prpf3	100	68.421	Rattus_norvegicus
ENSHCOG00000014058	prpf3	82	71.324	ENSRBIG00000028854	PRPF3	98	70.588	Rhinopithecus_bieti
ENSHCOG00000014058	prpf3	99	68.279	ENSRROG00000027464	PRPF3	100	68.563	Rhinopithecus_roxellana
ENSHCOG00000014058	prpf3	99	62.020	ENSSBOG00000033104	PRPF3	100	62.304	Saimiri_boliviensis_boliviensis
ENSHCOG00000014058	prpf3	99	68.182	ENSSHAG00000009548	PRPF3	100	68.466	Sarcophilus_harrisii
ENSHCOG00000014058	prpf3	100	76.709	ENSSFOG00015022014	prpf3	100	75.872	Scleropages_formosus
ENSHCOG00000014058	prpf3	100	81.653	ENSSMAG00000015739	prpf3	100	80.812	Scophthalmus_maximus
ENSHCOG00000014058	prpf3	100	77.396	ENSSDUG00000006840	prpf3	100	77.825	Seriola_dumerili
ENSHCOG00000014058	prpf3	100	81.399	ENSSLDG00000015423	prpf3	100	81.678	Seriola_lalandi_dorsalis
ENSHCOG00000014058	prpf3	99	68.279	ENSSARG00000011064	PRPF3	100	68.563	Sorex_araneus
ENSHCOG00000014058	prpf3	99	68.296	ENSSPUG00000000809	PRPF3	100	68.443	Sphenodon_punctatus
ENSHCOG00000014058	prpf3	100	81.135	ENSSPAG00000018721	prpf3	100	81.560	Stegastes_partitus
ENSHCOG00000014058	prpf3	99	68.279	ENSSSCG00000030119	PRPF3	100	72.302	Sus_scrofa
ENSHCOG00000014058	prpf3	99	58.592	ENSTGUG00000004552	PRPF3	100	58.732	Taeniopygia_guttata
ENSHCOG00000014058	prpf3	100	78.970	ENSTRUG00000014923	prpf3	100	78.857	Takifugu_rubripes
ENSHCOG00000014058	prpf3	99	78.984	ENSTNIG00000008058	prpf3	100	78.702	Tetraodon_nigroviridis
ENSHCOG00000014058	prpf3	81	70.068	ENSTBEG00000014072	PRPF3	87	71.202	Tupaia_belangeri
ENSHCOG00000014058	prpf3	99	63.158	ENSTTRG00000010616	PRPF3	100	63.442	Tursiops_truncatus
ENSHCOG00000014058	prpf3	79	72.482	ENSUAMG00000009345	PRPF3	100	72.302	Ursus_americanus
ENSHCOG00000014058	prpf3	99	68.279	ENSUMAG00000003720	PRPF3	100	68.563	Ursus_maritimus
ENSHCOG00000014058	prpf3	88	75.964	ENSVPAG00000005425	PRPF3	89	75.737	Vicugna_pacos
ENSHCOG00000014058	prpf3	99	68.279	ENSVVUG00000007933	PRPF3	100	72.333	Vulpes_vulpes
ENSHCOG00000014058	prpf3	99	68.175	ENSXETG00000018654	prpf3	100	68.175	Xenopus_tropicalis
ENSHCOG00000014058	prpf3	100	82.857	ENSXMAG00000016347	prpf3	100	82.609	Xiphophorus_maculatus