EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000014066 (Gene tree)
Gene ID: 109512246
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4454 bases
Position: chrKV879817.1:13839-18292
Accession: 109512246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011290	zf-U11-48K	PF05253.12	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000017973	-	1530	XM_019863852	ENSHCOP00000011290	343 (aa)	XP_019719411	UPI00094E1F0D

Gene Model

Click here to download ENSHCOG00000014066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014066	snrnp48	81	45.139	ENSG00000168566	SNRNP48	72	47.154	Homo_sapiens
ENSHCOG00000014066	snrnp48	95	69.697	ENSAPOG00000021430	snrnp48	75	75.099	Acanthochromis_polyacanthus
ENSHCOG00000014066	snrnp48	94	41.159	ENSAMEG00000017349	SNRNP48	72	46.000	Ailuropoda_melanoleuca
ENSHCOG00000014066	snrnp48	88	66.776	ENSACIG00000002032	snrnp48	75	71.146	Amphilophus_citrinellus
ENSHCOG00000014066	snrnp48	94	70.336	ENSAOCG00000010562	snrnp48	75	75.099	Amphiprion_ocellaris
ENSHCOG00000014066	snrnp48	94	70.031	ENSAPEG00000003231	snrnp48	75	75.099	Amphiprion_percula
ENSHCOG00000014066	snrnp48	93	69.375	ENSATEG00000020210	snrnp48	81	71.014	Anabas_testudineus
ENSHCOG00000014066	snrnp48	81	46.713	ENSACAG00000002811	SNRNP48	62	52.736	Anolis_carolinensis
ENSHCOG00000014066	snrnp48	81	45.486	ENSANAG00000033538	SNRNP48	72	47.561	Aotus_nancymaae
ENSHCOG00000014066	snrnp48	94	54.407	ENSAMXG00000015309	snrnp48	77	59.843	Astyanax_mexicanus
ENSHCOG00000014066	snrnp48	91	40.798	ENSBTAG00000001123	SNRNP48	71	44.898	Bos_taurus
ENSHCOG00000014066	snrnp48	81	45.833	ENSCJAG00000021330	SNRNP48	72	47.967	Callithrix_jacchus
ENSHCOG00000014066	snrnp48	92	40.909	ENSCAFG00000009574	SNRNP48	59	45.679	Canis_familiaris
ENSHCOG00000014066	snrnp48	92	40.909	ENSCAFG00020013203	SNRNP48	71	45.679	Canis_lupus_dingo
ENSHCOG00000014066	snrnp48	91	41.411	ENSCHIG00000015216	SNRNP48	71	45.714	Capra_hircus
ENSHCOG00000014066	snrnp48	81	45.833	ENSTSYG00000000698	SNRNP48	72	47.561	Carlito_syrichta
ENSHCOG00000014066	snrnp48	86	42.492	ENSCAPG00000006768	SNRNP48	72	47.768	Cavia_aperea
ENSHCOG00000014066	snrnp48	92	42.687	ENSCPOG00000007910	SNRNP48	72	47.561	Cavia_porcellus
ENSHCOG00000014066	snrnp48	78	45.126	ENSCCAG00000035652	SNRNP48	73	46.614	Cebus_capucinus
ENSHCOG00000014066	snrnp48	92	41.742	ENSCATG00000033947	SNRNP48	72	47.154	Cercocebus_atys
ENSHCOG00000014066	snrnp48	81	45.804	ENSCLAG00000003765	SNRNP48	72	48.374	Chinchilla_lanigera
ENSHCOG00000014066	snrnp48	81	45.833	ENSCSAG00000007409	SNRNP48	72	47.967	Chlorocebus_sabaeus
ENSHCOG00000014066	snrnp48	81	44.746	ENSCPBG00000019146	SNRNP48	64	51.208	Chrysemys_picta_bellii
ENSHCOG00000014066	snrnp48	81	45.833	ENSCANG00000030017	SNRNP48	72	47.967	Colobus_angolensis_palliatus
ENSHCOG00000014066	snrnp48	84	39.535	ENSCGRG00001008805	-	72	42.060	Cricetulus_griseus_chok1gshd
ENSHCOG00000014066	snrnp48	92	41.983	ENSCGRG00001001076	-	72	47.561	Cricetulus_griseus_chok1gshd
ENSHCOG00000014066	snrnp48	92	41.983	ENSCGRG00000007781	Snrnp48	72	47.561	Cricetulus_griseus_crigri
ENSHCOG00000014066	snrnp48	76	69.231	ENSCSEG00000000722	snrnp48	72	69.841	Cynoglossus_semilaevis
ENSHCOG00000014066	snrnp48	95	64.832	ENSCVAG00000019829	snrnp48	65	73.622	Cyprinodon_variegatus
ENSHCOG00000014066	snrnp48	94	50.301	ENSDARG00000039989	snrnp48	74	55.952	Danio_rerio
ENSHCOG00000014066	snrnp48	80	44.406	ENSDNOG00000014978	SNRNP48	87	36.667	Dasypus_novemcinctus
ENSHCOG00000014066	snrnp48	92	41.071	ENSDORG00000015140	Snrnp48	72	44.939	Dipodomys_ordii
ENSHCOG00000014066	snrnp48	81	45.804	ENSEASG00005012021	SNRNP48	72	47.561	Equus_asinus_asinus
ENSHCOG00000014066	snrnp48	81	45.804	ENSECAG00000026937	SNRNP48	72	47.561	Equus_caballus
ENSHCOG00000014066	snrnp48	80	44.561	ENSFCAG00000018853	SNRNP48	71	46.502	Felis_catus
ENSHCOG00000014066	snrnp48	81	48.649	ENSFALG00000007797	SNRNP48	64	56.650	Ficedula_albicollis
ENSHCOG00000014066	snrnp48	92	42.470	ENSFDAG00000009231	SNRNP48	72	46.988	Fukomys_damarensis
ENSHCOG00000014066	snrnp48	59	78.818	ENSFHEG00000014647	snrnp48	70	78.713	Fundulus_heteroclitus
ENSHCOG00000014066	snrnp48	90	60.252	ENSGMOG00000018599	-	77	68.548	Gadus_morhua
ENSHCOG00000014066	snrnp48	76	50.186	ENSGALG00000013005	SNRNP48	67	56.436	Gallus_gallus
ENSHCOG00000014066	snrnp48	94	63.804	ENSGAFG00000021639	snrnp48	74	72.047	Gambusia_affinis
ENSHCOG00000014066	snrnp48	72	73.092	ENSGACG00000017756	-	74	73.092	Gasterosteus_aculeatus
ENSHCOG00000014066	snrnp48	81	44.407	ENSGAGG00000000865	SNRNP48	67	50.725	Gopherus_agassizii
ENSHCOG00000014066	snrnp48	81	45.486	ENSGGOG00000013220	SNRNP48	72	47.561	Gorilla_gorilla
ENSHCOG00000014066	snrnp48	93	69.969	ENSHBUG00000017066	snrnp48	73	75.494	Haplochromis_burtoni
ENSHCOG00000014066	snrnp48	81	44.755	ENSHGLG00000015241	SNRNP48	72	47.154	Heterocephalus_glaber_female
ENSHCOG00000014066	snrnp48	81	44.755	ENSHGLG00100010027	SNRNP48	72	47.154	Heterocephalus_glaber_male
ENSHCOG00000014066	snrnp48	81	44.792	ENSSTOG00000014635	SNRNP48	72	46.748	Ictidomys_tridecemlineatus
ENSHCOG00000014066	snrnp48	81	44.406	ENSJJAG00000011495	Snrnp48	71	47.521	Jaculus_jaculus
ENSHCOG00000014066	snrnp48	94	66.361	ENSKMAG00000016514	snrnp48	74	73.123	Kryptolebias_marmoratus
ENSHCOG00000014066	snrnp48	82	70.318	ENSLBEG00000026249	snrnp48	81	69.286	Labrus_bergylta
ENSHCOG00000014066	snrnp48	97	47.181	ENSLACG00000003958	SNRNP48	73	51.600	Latimeria_chalumnae
ENSHCOG00000014066	snrnp48	83	56.098	ENSLOCG00000004187	snrnp48	73	59.109	Lepisosteus_oculatus
ENSHCOG00000014066	snrnp48	81	43.206	ENSLAFG00000011152	SNRNP48	72	45.749	Loxodonta_africana
ENSHCOG00000014066	snrnp48	81	45.833	ENSMFAG00000045216	SNRNP48	72	47.967	Macaca_fascicularis
ENSHCOG00000014066	snrnp48	81	45.833	ENSMMUG00000014785	SNRNP48	72	47.967	Macaca_mulatta
ENSHCOG00000014066	snrnp48	81	45.833	ENSMNEG00000042269	SNRNP48	72	47.967	Macaca_nemestrina
ENSHCOG00000014066	snrnp48	81	45.833	ENSMLEG00000034004	SNRNP48	72	47.967	Mandrillus_leucophaeus
ENSHCOG00000014066	snrnp48	94	67.485	ENSMAMG00000018673	snrnp48	66	73.810	Mastacembelus_armatus
ENSHCOG00000014066	snrnp48	81	48.986	ENSMGAG00000006037	SNRNP48	67	56.931	Meleagris_gallopavo
ENSHCOG00000014066	snrnp48	92	40.816	ENSMAUG00000011944	Snrnp48	73	46.748	Mesocricetus_auratus
ENSHCOG00000014066	snrnp48	83	43.836	ENSMICG00000012497	SNRNP48	73	45.635	Microcebus_murinus
ENSHCOG00000014066	snrnp48	92	41.279	ENSMOCG00000015555	Snrnp48	76	45.525	Microtus_ochrogaster
ENSHCOG00000014066	snrnp48	55	77.895	ENSMMOG00000003072	-	60	77.895	Mola_mola
ENSHCOG00000014066	snrnp48	85	43.000	ENSMODG00000009996	SNRNP48	68	45.098	Monodelphis_domestica
ENSHCOG00000014066	snrnp48	82	70.567	ENSMALG00000005725	snrnp48	75	74.603	Monopterus_albus
ENSHCOG00000014066	snrnp48	92	41.399	MGP_CAROLIEiJ_G0018441	Snrnp48	72	47.154	Mus_caroli
ENSHCOG00000014066	snrnp48	92	41.399	ENSMUSG00000021431	Snrnp48	72	47.154	Mus_musculus
ENSHCOG00000014066	snrnp48	92	42.274	MGP_PahariEiJ_G0019509	Snrnp48	72	47.561	Mus_pahari
ENSHCOG00000014066	snrnp48	92	41.399	MGP_SPRETEiJ_G0019321	Snrnp48	72	47.154	Mus_spretus
ENSHCOG00000014066	snrnp48	92	41.983	ENSNGAG00000004849	Snrnp48	72	48.780	Nannospalax_galili
ENSHCOG00000014066	snrnp48	93	69.659	ENSNBRG00000012127	snrnp48	74	75.099	Neolamprologus_brichardi
ENSHCOG00000014066	snrnp48	81	45.486	ENSNLEG00000011667	SNRNP48	72	47.561	Nomascus_leucogenys
ENSHCOG00000014066	snrnp48	87	41.304	ENSOPRG00000015471	SNRNP48	75	45.902	Ochotona_princeps
ENSHCOG00000014066	snrnp48	93	69.659	ENSONIG00000001520	snrnp48	74	75.099	Oreochromis_niloticus
ENSHCOG00000014066	snrnp48	53	35.437	ENSOANG00000019888	-	98	35.437	Ornithorhynchus_anatinus
ENSHCOG00000014066	snrnp48	79	43.011	ENSOCUG00000005168	SNRNP48	82	44.622	Oryctolagus_cuniculus
ENSHCOG00000014066	snrnp48	88	66.885	ENSORLG00000015654	snrnp48	73	71.654	Oryzias_latipes
ENSHCOG00000014066	snrnp48	88	66.557	ENSORLG00020015976	snrnp48	68	67.376	Oryzias_latipes_hni
ENSHCOG00000014066	snrnp48	88	66.885	ENSORLG00015022379	snrnp48	68	67.730	Oryzias_latipes_hsok
ENSHCOG00000014066	snrnp48	93	65.432	ENSOMEG00000022007	snrnp48	74	70.356	Oryzias_melastigma
ENSHCOG00000014066	snrnp48	82	42.907	ENSOGAG00000005275	SNRNP48	76	44.882	Otolemur_garnettii
ENSHCOG00000014066	snrnp48	82	43.448	ENSOARG00000017319	SNRNP48	71	48.792	Ovis_aries
ENSHCOG00000014066	snrnp48	81	45.486	ENSPPAG00000032873	SNRNP48	72	47.561	Pan_paniscus
ENSHCOG00000014066	snrnp48	81	44.792	ENSPPRG00000004283	SNRNP48	72	46.748	Panthera_pardus
ENSHCOG00000014066	snrnp48	70	47.131	ENSPTIG00000013502	SNRNP48	70	50.000	Panthera_tigris_altaica
ENSHCOG00000014066	snrnp48	81	45.486	ENSPTRG00000017703	SNRNP48	72	47.561	Pan_troglodytes
ENSHCOG00000014066	snrnp48	81	45.833	ENSPANG00000000771	SNRNP48	72	47.967	Papio_anubis
ENSHCOG00000014066	snrnp48	72	60.000	ENSPKIG00000013703	snrnp48	66	51.746	Paramormyrops_kingsleyae
ENSHCOG00000014066	snrnp48	83	44.816	ENSPSIG00000002213	SNRNP48	63	52.451	Pelodiscus_sinensis
ENSHCOG00000014066	snrnp48	79	60.072	ENSPMGG00000008120	snrnp48	91	63.566	Periophthalmus_magnuspinnatus
ENSHCOG00000014066	snrnp48	92	41.983	ENSPEMG00000008872	Snrnp48	72	47.561	Peromyscus_maniculatus_bairdii
ENSHCOG00000014066	snrnp48	94	66.265	ENSPFOG00000003578	snrnp48	74	73.228	Poecilia_formosa
ENSHCOG00000014066	snrnp48	69	71.730	ENSPLAG00000002290	snrnp48	82	71.730	Poecilia_latipinna
ENSHCOG00000014066	snrnp48	94	66.265	ENSPMEG00000018033	snrnp48	74	73.228	Poecilia_mexicana
ENSHCOG00000014066	snrnp48	73	72.835	ENSPREG00000018541	snrnp48	74	72.835	Poecilia_reticulata
ENSHCOG00000014066	snrnp48	81	45.486	ENSPPYG00000016209	SNRNP48	72	47.561	Pongo_abelii
ENSHCOG00000014066	snrnp48	69	32.661	ENSPCAG00000011991	SNRNP48	90	33.745	Procavia_capensis
ENSHCOG00000014066	snrnp48	81	44.948	ENSPVAG00000002854	SNRNP48	72	46.939	Pteropus_vampyrus
ENSHCOG00000014066	snrnp48	92	70.253	ENSPNYG00000015399	snrnp48	81	75.494	Pundamilia_nyererei
ENSHCOG00000014066	snrnp48	92	41.908	ENSRNOG00000013756	Snrnp48	72	47.791	Rattus_norvegicus
ENSHCOG00000014066	snrnp48	81	45.833	ENSRBIG00000043856	SNRNP48	77	47.967	Rhinopithecus_bieti
ENSHCOG00000014066	snrnp48	81	45.833	ENSRROG00000043229	SNRNP48	72	47.967	Rhinopithecus_roxellana
ENSHCOG00000014066	snrnp48	81	45.833	ENSSBOG00000019486	SNRNP48	72	47.967	Saimiri_boliviensis_boliviensis
ENSHCOG00000014066	snrnp48	82	43.986	ENSSHAG00000014483	SNRNP48	70	46.341	Sarcophilus_harrisii
ENSHCOG00000014066	snrnp48	71	58.268	ENSSFOG00015006610	snrnp48	59	58.498	Scleropages_formosus
ENSHCOG00000014066	snrnp48	94	67.178	ENSSDUG00000014953	snrnp48	81	68.571	Seriola_dumerili
ENSHCOG00000014066	snrnp48	94	67.178	ENSSLDG00000005989	snrnp48	81	68.571	Seriola_lalandi_dorsalis
ENSHCOG00000014066	snrnp48	85	45.779	ENSSPUG00000006257	SNRNP48	57	53.465	Sphenodon_punctatus
ENSHCOG00000014066	snrnp48	94	71.865	ENSSPAG00000006454	snrnp48	75	77.075	Stegastes_partitus
ENSHCOG00000014066	snrnp48	82	47.635	ENSTGUG00000007575	SNRNP48	66	55.769	Taeniopygia_guttata
ENSHCOG00000014066	snrnp48	74	70.588	ENSTRUG00000007031	snrnp48	75	70.866	Takifugu_rubripes
ENSHCOG00000014066	snrnp48	98	60.355	ENSTNIG00000012977	-	77	69.685	Tetraodon_nigroviridis
ENSHCOG00000014066	snrnp48	74	45.038	ENSTBEG00000015620	SNRNP48	74	45.020	Tupaia_belangeri
ENSHCOG00000014066	snrnp48	91	41.641	ENSTTRG00000016715	SNRNP48	71	46.914	Tursiops_truncatus
ENSHCOG00000014066	snrnp48	92	41.033	ENSUAMG00000003690	SNRNP48	71	46.281	Ursus_americanus
ENSHCOG00000014066	snrnp48	71	46.586	ENSVPAG00000003557	SNRNP48	70	50.739	Vicugna_pacos
ENSHCOG00000014066	snrnp48	92	40.909	ENSVVUG00000004996	SNRNP48	71	45.679	Vulpes_vulpes
ENSHCOG00000014066	snrnp48	90	42.532	ENSXETG00000020447	snrnp48	70	47.257	Xenopus_tropicalis
ENSHCOG00000014066	snrnp48	69	70.588	ENSXCOG00000004478	snrnp48	73	70.588	Xiphophorus_couchianus
ENSHCOG00000014066	snrnp48	94	65.361	ENSXMAG00000013595	snrnp48	74	72.047	Xiphophorus_maculatus