EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000014119 (Gene tree)
Gene ID: 109522782
Gene Symbol: -
Alias: -
Full Name: threonine--tRNA ligase%2C cytoplasmic-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11368 bases
Position: chrKV880155.1:550789-562156
Accession: 109522782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011332	tRNA_SAD	PF07973.14	2.2e-05	1	1
ENSHCOP00000011332	HGTP_anticodon	PF03129.20	2.3e-18	1	1
ENSHCOP00000011332	tRNA-synt_2b	PF00587.25	2.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018018	-	2769	XM_019881574	ENSHCOP00000011332	698 (aa)	XP_019737133	UPI00094E2418

Gene Model

Click here to download ENSHCOG00000014119's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000014119	-	81	63.235	ENSHCOG00000019262	tars	93	63.235
ENSHCOG00000014119	-	95	51.560	ENSHCOG00000001263	tarsl2	99	61.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014119	-	94	52.232	ENSG00000185418	TARSL2	99	47.260	Homo_sapiens
ENSHCOG00000014119	-	61	77.882	ENSAPOG00000015706	-	100	77.882	Acanthochromis_polyacanthus
ENSHCOG00000014119	-	94	52.167	ENSAMEG00000003074	TARSL2	85	52.167	Ailuropoda_melanoleuca
ENSHCOG00000014119	-	63	85.194	ENSACIG00000007759	-	95	85.194	Amphilophus_citrinellus
ENSHCOG00000014119	-	61	82.477	ENSAOCG00000012359	-	99	82.477	Amphiprion_ocellaris
ENSHCOG00000014119	-	61	79.294	ENSAPEG00000007512	-	100	79.294	Amphiprion_percula
ENSHCOG00000014119	-	96	80.477	ENSATEG00000023568	-	97	80.477	Anabas_testudineus
ENSHCOG00000014119	-	94	51.198	ENSAPLG00000008485	TARSL2	93	51.198	Anas_platyrhynchos
ENSHCOG00000014119	-	95	51.479	ENSACAG00000003076	-	99	51.479	Anolis_carolinensis
ENSHCOG00000014119	-	94	39.248	ENSACAG00000000199	TARSL2	87	39.248	Anolis_carolinensis
ENSHCOG00000014119	-	94	49.185	ENSANAG00000020687	TARSL2	84	50.558	Aotus_nancymaae
ENSHCOG00000014119	-	99	77.122	ENSACLG00000020262	-	100	77.122	Astatotilapia_calliptera
ENSHCOG00000014119	-	99	67.147	ENSAMXG00000012533	-	99	67.147	Astyanax_mexicanus
ENSHCOG00000014119	-	94	51.556	ENSBTAG00000007651	TARSL2	84	51.556	Bos_taurus
ENSHCOG00000014119	-	94	61.576	ENSCJAG00000017350	TARSL2	77	61.576	Callithrix_jacchus
ENSHCOG00000014119	-	94	51.970	ENSCAFG00000010453	TARSL2	82	51.970	Canis_familiaris
ENSHCOG00000014119	-	97	50.805	ENSCAFG00020020868	TARSL2	97	54.077	Canis_lupus_dingo
ENSHCOG00000014119	-	83	53.469	ENSCHIG00000015264	TARSL2	81	53.469	Capra_hircus
ENSHCOG00000014119	-	94	51.045	ENSTSYG00000004538	TARSL2	95	51.045	Carlito_syrichta
ENSHCOG00000014119	-	93	45.706	ENSCAPG00000004815	TARSL2	98	45.706	Cavia_aperea
ENSHCOG00000014119	-	94	51.493	ENSCPOG00000008850	TARSL2	95	51.493	Cavia_porcellus
ENSHCOG00000014119	-	94	52.296	ENSCCAG00000030068	TARSL2	83	52.296	Cebus_capucinus
ENSHCOG00000014119	-	94	52.096	ENSCATG00000037383	TARSL2	86	52.096	Cercocebus_atys
ENSHCOG00000014119	-	94	51.194	ENSCLAG00000016873	TARSL2	87	51.194	Chinchilla_lanigera
ENSHCOG00000014119	-	94	52.096	ENSCSAG00000016828	TARSL2	83	52.096	Chlorocebus_sabaeus
ENSHCOG00000014119	-	88	51.115	ENSCHOG00000001319	TARSL2	95	51.115	Choloepus_hoffmanni
ENSHCOG00000014119	-	94	51.420	ENSCPBG00000010792	TARSL2	84	51.420	Chrysemys_picta_bellii
ENSHCOG00000014119	-	94	52.246	ENSCANG00000035438	TARSL2	93	52.246	Colobus_angolensis_palliatus
ENSHCOG00000014119	-	94	51.111	ENSCGRG00001020827	Tarsl2	84	51.111	Cricetulus_griseus_chok1gshd
ENSHCOG00000014119	-	94	51.111	ENSCGRG00000011398	Tarsl2	93	51.111	Cricetulus_griseus_crigri
ENSHCOG00000014119	-	99	73.669	ENSCSEG00000002562	-	100	82.436	Cynoglossus_semilaevis
ENSHCOG00000014119	-	61	84.149	ENSCVAG00000009253	-	99	84.149	Cyprinodon_variegatus
ENSHCOG00000014119	-	60	76.722	ENSDARG00000075385	LO017852.1	99	76.722	Danio_rerio
ENSHCOG00000014119	-	94	50.671	ENSDNOG00000046161	TARSL2	96	50.671	Dasypus_novemcinctus
ENSHCOG00000014119	-	94	52.167	ENSDORG00000009653	Tarsl2	95	52.167	Dipodomys_ordii
ENSHCOG00000014119	-	94	52.000	ENSEASG00005017718	TARSL2	84	52.000	Equus_asinus_asinus
ENSHCOG00000014119	-	94	52.000	ENSECAG00000024315	TARSL2	84	52.000	Equus_caballus
ENSHCOG00000014119	-	86	53.808	ENSEEUG00000014117	TARSL2	98	53.808	Erinaceus_europaeus
ENSHCOG00000014119	-	98	72.741	ENSELUG00000013552	-	98	72.741	Esox_lucius
ENSHCOG00000014119	-	94	52.000	ENSFCAG00000008836	TARSL2	82	53.397	Felis_catus
ENSHCOG00000014119	-	94	52.395	ENSFALG00000012444	TARSL2	90	52.395	Ficedula_albicollis
ENSHCOG00000014119	-	95	49.629	ENSFDAG00000002767	TARSL2	96	49.629	Fukomys_damarensis
ENSHCOG00000014119	-	63	83.973	ENSFHEG00000021877	-	81	83.973	Fundulus_heteroclitus
ENSHCOG00000014119	-	96	72.836	ENSGMOG00000006184	-	97	72.836	Gadus_morhua
ENSHCOG00000014119	-	94	51.647	ENSGALG00000003985	TARSL2	85	51.647	Gallus_gallus
ENSHCOG00000014119	-	95	52.695	ENSGALG00000043416	-	95	63.171	Gallus_gallus
ENSHCOG00000014119	-	99	76.301	ENSGAFG00000012691	-	100	76.301	Gambusia_affinis
ENSHCOG00000014119	-	99	77.681	ENSGACG00000011734	-	100	77.681	Gasterosteus_aculeatus
ENSHCOG00000014119	-	94	51.570	ENSGAGG00000010775	TARSL2	84	51.570	Gopherus_agassizii
ENSHCOG00000014119	-	94	52.083	ENSGGOG00000007839	TARSL2	86	52.083	Gorilla_gorilla
ENSHCOG00000014119	-	99	77.410	ENSHBUG00000003411	-	100	77.410	Haplochromis_burtoni
ENSHCOG00000014119	-	94	51.271	ENSHGLG00000011618	TARSL2	85	51.271	Heterocephalus_glaber_female
ENSHCOG00000014119	-	94	51.271	ENSHGLG00100016769	TARSL2	95	51.271	Heterocephalus_glaber_male
ENSHCOG00000014119	-	61	70.588	ENSIPUG00000000099	-	100	70.588	Ictalurus_punctatus
ENSHCOG00000014119	-	94	51.940	ENSSTOG00000032725	TARSL2	84	51.940	Ictidomys_tridecemlineatus
ENSHCOG00000014119	-	99	75.758	ENSKMAG00000001354	-	100	75.758	Kryptolebias_marmoratus
ENSHCOG00000014119	-	61	80.941	ENSLBEG00000026238	-	100	80.941	Labrus_bergylta
ENSHCOG00000014119	-	94	51.791	ENSLAFG00000011941	TARSL2	99	51.791	Loxodonta_africana
ENSHCOG00000014119	-	94	52.096	ENSMFAG00000001902	TARSL2	83	52.096	Macaca_fascicularis
ENSHCOG00000014119	-	94	52.096	ENSMMUG00000000278	TARSL2	83	52.096	Macaca_mulatta
ENSHCOG00000014119	-	94	51.946	ENSMNEG00000034952	TARSL2	83	51.946	Macaca_nemestrina
ENSHCOG00000014119	-	94	52.246	ENSMLEG00000035535	TARSL2	95	52.246	Mandrillus_leucophaeus
ENSHCOG00000014119	-	99	77.986	ENSMAMG00000015032	-	100	77.986	Mastacembelus_armatus
ENSHCOG00000014119	-	99	77.122	ENSMZEG00005015989	-	100	77.122	Maylandia_zebra
ENSHCOG00000014119	-	86	58.989	ENSMGAG00000004951	TARSL2	96	58.989	Meleagris_gallopavo
ENSHCOG00000014119	-	86	59.481	ENSMAUG00000015756	Tarsl2	83	59.481	Mesocricetus_auratus
ENSHCOG00000014119	-	94	51.940	ENSMICG00000013039	TARSL2	97	51.940	Microcebus_murinus
ENSHCOG00000014119	-	94	51.642	ENSMOCG00000014909	Tarsl2	85	51.642	Microtus_ochrogaster
ENSHCOG00000014119	-	63	82.688	ENSMMOG00000016135	-	100	82.688	Mola_mola
ENSHCOG00000014119	-	94	50.898	ENSMODG00000011941	TARSL2	83	50.898	Monodelphis_domestica
ENSHCOG00000014119	-	94	79.514	ENSMALG00000007340	-	94	79.514	Monopterus_albus
ENSHCOG00000014119	-	94	50.972	MGP_CAROLIEiJ_G0029834	Tarsl2	85	50.972	Mus_caroli
ENSHCOG00000014119	-	94	50.815	ENSMUSG00000030515	Tarsl2	85	50.815	Mus_musculus
ENSHCOG00000014119	-	94	50.822	MGP_PahariEiJ_G0013059	Tarsl2	85	50.815	Mus_pahari
ENSHCOG00000014119	-	94	52.444	ENSMPUG00000011032	TARSL2	86	52.444	Mustela_putorius_furo
ENSHCOG00000014119	-	79	51.687	ENSMLUG00000024482	-	94	51.687	Myotis_lucifugus
ENSHCOG00000014119	-	94	51.194	ENSMLUG00000012870	-	84	51.194	Myotis_lucifugus
ENSHCOG00000014119	-	94	50.822	ENSNGAG00000020451	Tarsl2	88	49.356	Nannospalax_galili
ENSHCOG00000014119	-	95	79.279	ENSNBRG00000003429	-	97	79.279	Neolamprologus_brichardi
ENSHCOG00000014119	-	94	51.488	ENSNLEG00000000541	TARSL2	88	50.000	Nomascus_leucogenys
ENSHCOG00000014119	-	81	47.535	ENSMEUG00000002935	TARSL2	71	47.535	Notamacropus_eugenii
ENSHCOG00000014119	-	71	44.869	ENSOPRG00000002689	-	62	44.869	Ochotona_princeps
ENSHCOG00000014119	-	94	51.642	ENSODEG00000014454	TARSL2	84	51.642	Octodon_degus
ENSHCOG00000014119	-	95	78.261	ENSONIG00000006402	-	99	78.711	Oreochromis_niloticus
ENSHCOG00000014119	-	94	50.375	ENSOANG00000013263	TARSL2	99	50.375	Ornithorhynchus_anatinus
ENSHCOG00000014119	-	94	51.420	ENSOCUG00000010740	TARSL2	94	51.420	Oryctolagus_cuniculus
ENSHCOG00000014119	-	99	73.247	ENSORLG00000010391	-	100	73.247	Oryzias_latipes
ENSHCOG00000014119	-	99	74.601	ENSORLG00020008928	-	100	74.601	Oryzias_latipes_hni
ENSHCOG00000014119	-	99	74.601	ENSORLG00015014897	-	100	74.601	Oryzias_latipes_hsok
ENSHCOG00000014119	-	99	76.052	ENSOMEG00000009022	-	100	76.052	Oryzias_melastigma
ENSHCOG00000014119	-	94	50.523	ENSOGAG00000014311	TARSL2	83	50.523	Otolemur_garnettii
ENSHCOG00000014119	-	94	52.012	ENSOARG00000016573	TARSL2	95	52.012	Ovis_aries
ENSHCOG00000014119	-	94	51.935	ENSPPAG00000040066	TARSL2	97	51.935	Pan_paniscus
ENSHCOG00000014119	-	94	52.000	ENSPPRG00000017275	TARSL2	83	53.397	Panthera_pardus
ENSHCOG00000014119	-	94	52.000	ENSPTIG00000015184	TARSL2	84	52.000	Panthera_tigris_altaica
ENSHCOG00000014119	-	94	52.232	ENSPTRG00000007516	TARSL2	83	52.232	Pan_troglodytes
ENSHCOG00000014119	-	94	50.221	ENSPANG00000022401	TARSL2	83	50.000	Papio_anubis
ENSHCOG00000014119	-	96	66.418	ENSPKIG00000010658	-	99	74.353	Paramormyrops_kingsleyae
ENSHCOG00000014119	-	82	53.114	ENSPSIG00000008419	TARSL2	99	53.114	Pelodiscus_sinensis
ENSHCOG00000014119	-	62	81.567	ENSPMGG00000007785	-	99	81.567	Periophthalmus_magnuspinnatus
ENSHCOG00000014119	-	94	51.121	ENSPEMG00000019852	Tarsl2	90	51.121	Peromyscus_maniculatus_bairdii
ENSHCOG00000014119	-	94	50.449	ENSPCIG00000022481	TARSL2	83	50.449	Phascolarctos_cinereus
ENSHCOG00000014119	-	95	77.143	ENSPFOG00000013444	-	100	77.143	Poecilia_formosa
ENSHCOG00000014119	-	99	76.301	ENSPLAG00000018145	-	100	76.301	Poecilia_latipinna
ENSHCOG00000014119	-	99	76.445	ENSPMEG00000023625	-	100	76.445	Poecilia_mexicana
ENSHCOG00000014119	-	61	83.765	ENSPREG00000017312	-	100	83.765	Poecilia_reticulata
ENSHCOG00000014119	-	82	59.381	ENSPPYG00000006830	TARSL2	81	59.381	Pongo_abelii
ENSHCOG00000014119	-	86	49.835	ENSPCAG00000011132	TARSL2	76	49.835	Procavia_capensis
ENSHCOG00000014119	-	84	61.044	ENSPCOG00000026095	TARSL2	80	61.044	Propithecus_coquereli
ENSHCOG00000014119	-	93	39.788	ENSPVAG00000012240	TARSL2	83	39.788	Pteropus_vampyrus
ENSHCOG00000014119	-	99	77.266	ENSPNYG00000004232	-	100	77.266	Pundamilia_nyererei
ENSHCOG00000014119	-	99	67.294	ENSPNAG00000002308	-	100	67.294	Pygocentrus_nattereri
ENSHCOG00000014119	-	59	46.262	ENSRNOG00000024460	Tarsl2	76	46.262	Rattus_norvegicus
ENSHCOG00000014119	-	94	52.545	ENSRBIG00000035707	TARSL2	86	52.545	Rhinopithecus_bieti
ENSHCOG00000014119	-	94	52.545	ENSRROG00000029492	TARSL2	84	60.430	Rhinopithecus_roxellana
ENSHCOG00000014119	-	94	52.000	ENSSBOG00000029807	TARSL2	97	52.000	Saimiri_boliviensis_boliviensis
ENSHCOG00000014119	-	94	51.271	ENSSHAG00000010266	TARSL2	89	51.271	Sarcophilus_harrisii
ENSHCOG00000014119	-	96	65.522	ENSSFOG00015022086	tars2	88	75.414	Scleropages_formosus
ENSHCOG00000014119	-	95	77.928	ENSSMAG00000015682	-	99	76.197	Scophthalmus_maximus
ENSHCOG00000014119	-	61	86.916	ENSSDUG00000007180	-	99	86.916	Seriola_dumerili
ENSHCOG00000014119	-	61	87.119	ENSSLDG00000015367	-	100	87.119	Seriola_lalandi_dorsalis
ENSHCOG00000014119	-	61	62.150	ENSSPUG00000001523	TARSL2	99	62.150	Sphenodon_punctatus
ENSHCOG00000014119	-	99	74.058	ENSSPAG00000018887	-	100	74.058	Stegastes_partitus
ENSHCOG00000014119	-	91	51.014	ENSSSCG00000005781	TARSL2	98	50.152	Sus_scrofa
ENSHCOG00000014119	-	61	58.974	ENSTGUG00000004602	-	99	58.974	Taeniopygia_guttata
ENSHCOG00000014119	-	94	51.647	ENSTGUG00000005726	TARSL2	99	51.647	Taeniopygia_guttata
ENSHCOG00000014119	-	61	85.579	ENSTRUG00000015004	-	99	85.579	Takifugu_rubripes
ENSHCOG00000014119	-	98	70.213	ENSTNIG00000008060	-	99	70.213	Tetraodon_nigroviridis
ENSHCOG00000014119	-	70	57.382	ENSTBEG00000001134	-	73	57.382	Tupaia_belangeri
ENSHCOG00000014119	-	94	51.791	ENSTTRG00000016207	TARSL2	95	51.791	Tursiops_truncatus
ENSHCOG00000014119	-	94	52.000	ENSUMAG00000024371	TARSL2	99	55.437	Ursus_maritimus
ENSHCOG00000014119	-	95	51.642	ENSVVUG00000014742	TARSL2	95	52.121	Vulpes_vulpes
ENSHCOG00000014119	-	66	81.385	ENSXCOG00000019508	-	100	84.112	Xiphophorus_couchianus
ENSHCOG00000014119	-	99	76.012	ENSXMAG00000016382	-	100	76.012	Xiphophorus_maculatus