EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000014161 (Gene tree)
Gene ID: 109515482
Gene Symbol: lyn
Alias: zgc:92124
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 8384 bases
Position: chrKV879929.1:853896-862279
Accession: 109515482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011371	Methyltransf_15	PF09445.10	1.8e-42	1	1
ENSHCOP00000011371	UPF0020	PF01170.18	7.6e-06	1	1
ENSHCOP00000011371	Met_10	PF02475.16	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018073	-	2751	XM_019869288	ENSHCOP00000011371	777 (aa)	XP_019724847	UPI00094E9CDC

Gene Model

Click here to download ENSHCOG00000014161's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014161	lyn	98	37.703	ENSG00000137574	TGS1	98	38.051	Homo_sapiens
ENSHCOG00000014161	lyn	67	51.053	ENSAPOG00000004321	-	98	50.785	Acanthochromis_polyacanthus
ENSHCOG00000014161	lyn	98	38.825	ENSAMEG00000001781	TGS1	98	38.710	Ailuropoda_melanoleuca
ENSHCOG00000014161	lyn	100	52.771	ENSAOCG00000022799	lyn	99	52.892	Amphiprion_ocellaris
ENSHCOG00000014161	lyn	81	53.382	ENSAPEG00000019723	TGS1	97	53.451	Amphiprion_percula
ENSHCOG00000014161	lyn	94	52.828	ENSATEG00000005927	lyn	93	53.009	Anabas_testudineus
ENSHCOG00000014161	lyn	80	38.849	ENSAPLG00000006073	-	99	38.993	Anas_platyrhynchos
ENSHCOG00000014161	lyn	99	36.261	ENSACAG00000017988	TGS1	93	36.476	Anolis_carolinensis
ENSHCOG00000014161	lyn	98	38.386	ENSANAG00000035525	TGS1	98	38.061	Aotus_nancymaae
ENSHCOG00000014161	lyn	99	52.190	ENSACLG00000000261	lyn	99	52.190	Astatotilapia_calliptera
ENSHCOG00000014161	lyn	100	45.305	ENSAMXG00000014086	lyn	99	46.053	Astyanax_mexicanus
ENSHCOG00000014161	lyn	97	40.095	ENSBTAG00000005898	TGS1	97	38.908	Bos_taurus
ENSHCOG00000014161	lyn	98	38.754	ENSCJAG00000016657	TGS1	97	38.657	Callithrix_jacchus
ENSHCOG00000014161	lyn	98	39.631	ENSCAFG00000007011	TGS1	98	39.464	Canis_familiaris
ENSHCOG00000014161	lyn	98	38.985	ENSCAFG00020015485	TGS1	98	38.811	Canis_lupus_dingo
ENSHCOG00000014161	lyn	97	37.816	ENSCHIG00000013976	TGS1	97	37.785	Capra_hircus
ENSHCOG00000014161	lyn	96	38.889	ENSTSYG00000000171	TGS1	96	38.771	Carlito_syrichta
ENSHCOG00000014161	lyn	90	41.667	ENSCAPG00000013732	TGS1	93	42.126	Cavia_aperea
ENSHCOG00000014161	lyn	98	41.190	ENSCPOG00000009713	TGS1	98	41.472	Cavia_porcellus
ENSHCOG00000014161	lyn	98	37.875	ENSCCAG00000030476	TGS1	97	38.453	Cebus_capucinus
ENSHCOG00000014161	lyn	99	38.279	ENSCATG00000035375	TGS1	99	38.523	Cercocebus_atys
ENSHCOG00000014161	lyn	98	38.941	ENSCLAG00000009468	TGS1	98	38.525	Chinchilla_lanigera
ENSHCOG00000014161	lyn	92	35.472	ENSCSAG00000014611	TGS1	99	35.723	Chlorocebus_sabaeus
ENSHCOG00000014161	lyn	98	36.659	ENSCHOG00000001462	TGS1	98	36.659	Choloepus_hoffmanni
ENSHCOG00000014161	lyn	99	37.012	ENSCPBG00000004958	TGS1	99	37.710	Chrysemys_picta_bellii
ENSHCOG00000014161	lyn	99	38.128	ENSCANG00000041389	TGS1	99	38.356	Colobus_angolensis_palliatus
ENSHCOG00000014161	lyn	99	38.895	ENSCGRG00001019470	Tgs1	99	37.832	Cricetulus_griseus_chok1gshd
ENSHCOG00000014161	lyn	99	37.457	ENSCGRG00000008981	Tgs1	99	36.596	Cricetulus_griseus_crigri
ENSHCOG00000014161	lyn	99	44.192	ENSDARG00000107511	lyn	99	83.425	Danio_rerio
ENSHCOG00000014161	lyn	98	38.728	ENSDNOG00000008353	TGS1	98	38.426	Dasypus_novemcinctus
ENSHCOG00000014161	lyn	98	39.120	ENSDORG00000012484	Tgs1	98	39.120	Dipodomys_ordii
ENSHCOG00000014161	lyn	69	36.627	ENSETEG00000005126	TGS1	69	36.684	Echinops_telfairi
ENSHCOG00000014161	lyn	91	35.837	ENSEASG00005016371	TGS1	94	35.970	Equus_asinus_asinus
ENSHCOG00000014161	lyn	98	38.613	ENSECAG00000019399	TGS1	98	38.747	Equus_caballus
ENSHCOG00000014161	lyn	68	78.182	ENSEEUG00000001735	TGS1	68	78.182	Erinaceus_europaeus
ENSHCOG00000014161	lyn	99	45.711	ENSELUG00000012537	lyn	99	46.298	Esox_lucius
ENSHCOG00000014161	lyn	98	38.728	ENSFCAG00000011478	TGS1	98	38.844	Felis_catus
ENSHCOG00000014161	lyn	90	39.926	ENSFALG00000010249	TGS1	99	39.312	Ficedula_albicollis
ENSHCOG00000014161	lyn	98	40.471	ENSFDAG00000011405	TGS1	98	40.164	Fukomys_damarensis
ENSHCOG00000014161	lyn	99	37.984	ENSGALG00000015340	TGS1	99	38.598	Gallus_gallus
ENSHCOG00000014161	lyn	99	36.302	ENSGAGG00000019590	TGS1	99	37.430	Gopherus_agassizii
ENSHCOG00000014161	lyn	98	37.803	ENSGGOG00000008624	TGS1	98	37.919	Gorilla_gorilla
ENSHCOG00000014161	lyn	72	49.150	ENSHBUG00000003518	lyn	100	49.322	Haplochromis_burtoni
ENSHCOG00000014161	lyn	71	67.647	ENSHGLG00000000284	TGS1	87	67.647	Heterocephalus_glaber_female
ENSHCOG00000014161	lyn	81	45.521	ENSIPUG00000002294	tgs1	99	42.509	Ictalurus_punctatus
ENSHCOG00000014161	lyn	98	38.363	ENSSTOG00000009597	TGS1	98	38.650	Ictidomys_tridecemlineatus
ENSHCOG00000014161	lyn	99	37.614	ENSJJAG00000016239	Tgs1	99	37.045	Jaculus_jaculus
ENSHCOG00000014161	lyn	99	55.736	ENSLBEG00000027341	-	99	56.429	Labrus_bergylta
ENSHCOG00000014161	lyn	99	38.435	ENSLACG00000008074	TGS1	100	38.488	Latimeria_chalumnae
ENSHCOG00000014161	lyn	99	42.421	ENSLOCG00000005492	lyn	98	42.706	Lepisosteus_oculatus
ENSHCOG00000014161	lyn	98	38.328	ENSLAFG00000015386	TGS1	98	38.863	Loxodonta_africana
ENSHCOG00000014161	lyn	99	38.549	ENSMFAG00000029838	TGS1	99	38.400	Macaca_fascicularis
ENSHCOG00000014161	lyn	99	38.052	ENSMMUG00000005478	TGS1	99	38.182	Macaca_mulatta
ENSHCOG00000014161	lyn	99	38.662	ENSMNEG00000023719	TGS1	99	38.514	Macaca_nemestrina
ENSHCOG00000014161	lyn	99	38.732	ENSMLEG00000034807	TGS1	99	38.977	Mandrillus_leucophaeus
ENSHCOG00000014161	lyn	100	55.936	ENSMAMG00000009542	TGS1	100	56.426	Mastacembelus_armatus
ENSHCOG00000014161	lyn	99	52.315	ENSMZEG00005015681	lyn	99	52.130	Maylandia_zebra
ENSHCOG00000014161	lyn	85	39.286	ENSMGAG00000010966	TGS1	96	39.657	Meleagris_gallopavo
ENSHCOG00000014161	lyn	99	39.607	ENSMAUG00000009875	Tgs1	99	38.194	Mesocricetus_auratus
ENSHCOG00000014161	lyn	98	39.220	ENSMICG00000011199	TGS1	98	39.302	Microcebus_murinus
ENSHCOG00000014161	lyn	99	39.931	ENSMOCG00000019560	Tgs1	99	39.516	Microtus_ochrogaster
ENSHCOG00000014161	lyn	77	78.761	ENSMMOG00000021495	lyn	92	79.018	Mola_mola
ENSHCOG00000014161	lyn	79	43.685	ENSMODG00000009174	TGS1	86	43.685	Monodelphis_domestica
ENSHCOG00000014161	lyn	50	40.943	ENSMALG00000021440	lyn	99	54.316	Monopterus_albus
ENSHCOG00000014161	lyn	99	39.175	MGP_CAROLIEiJ_G0025779	-	98	38.870	Mus_caroli
ENSHCOG00000014161	lyn	99	39.195	ENSMUSG00000028233	Tgs1	98	38.657	Mus_musculus
ENSHCOG00000014161	lyn	99	38.710	MGP_PahariEiJ_G0023901	-	98	38.293	Mus_pahari
ENSHCOG00000014161	lyn	99	38.946	MGP_SPRETEiJ_G0026727	-	98	38.524	Mus_spretus
ENSHCOG00000014161	lyn	53	65.581	MGP_SPRETEiJ_G0026726	-	70	65.581	Mus_spretus
ENSHCOG00000014161	lyn	91	35.068	ENSMPUG00000010475	TGS1	99	34.826	Mustela_putorius_furo
ENSHCOG00000014161	lyn	98	38.603	ENSMLUG00000014857	TGS1	98	38.488	Myotis_lucifugus
ENSHCOG00000014161	lyn	99	37.832	ENSNGAG00000019532	Tgs1	99	37.860	Nannospalax_galili
ENSHCOG00000014161	lyn	98	37.963	ENSNLEG00000001101	TGS1	98	38.310	Nomascus_leucogenys
ENSHCOG00000014161	lyn	92	38.161	ENSMEUG00000001697	TGS1	96	38.846	Notamacropus_eugenii
ENSHCOG00000014161	lyn	86	37.517	ENSODEG00000002948	TGS1	94	37.517	Octodon_degus
ENSHCOG00000014161	lyn	89	50.137	ENSONIG00000006339	lyn	99	50.617	Oreochromis_niloticus
ENSHCOG00000014161	lyn	90	39.147	ENSOANG00000021853	TGS1	98	39.497	Ornithorhynchus_anatinus
ENSHCOG00000014161	lyn	98	38.256	ENSOCUG00000017522	TGS1	98	38.256	Oryctolagus_cuniculus
ENSHCOG00000014161	lyn	100	47.491	ENSORLG00000004299	lyn	96	48.344	Oryzias_latipes
ENSHCOG00000014161	lyn	100	45.176	ENSORLG00020004200	lyn	96	46.263	Oryzias_latipes_hni
ENSHCOG00000014161	lyn	90	47.067	ENSORLG00015007251	lyn	96	49.185	Oryzias_latipes_hsok
ENSHCOG00000014161	lyn	100	48.399	ENSOMEG00000020174	lyn	99	49.323	Oryzias_melastigma
ENSHCOG00000014161	lyn	97	38.698	ENSOARG00000014613	TGS1	97	38.035	Ovis_aries
ENSHCOG00000014161	lyn	98	37.616	ENSPPAG00000039058	TGS1	98	37.963	Pan_paniscus
ENSHCOG00000014161	lyn	98	38.283	ENSPPRG00000000677	TGS1	98	38.283	Panthera_pardus
ENSHCOG00000014161	lyn	98	38.391	ENSPTIG00000005122	TGS1	98	38.470	Panthera_tigris_altaica
ENSHCOG00000014161	lyn	98	37.616	ENSPTRG00000020262	TGS1	98	37.963	Pan_troglodytes
ENSHCOG00000014161	lyn	99	38.845	ENSPANG00000018910	TGS1	99	38.750	Papio_anubis
ENSHCOG00000014161	lyn	99	46.377	ENSPKIG00000005454	lyn	88	46.275	Paramormyrops_kingsleyae
ENSHCOG00000014161	lyn	99	37.345	ENSPSIG00000014983	TGS1	99	38.341	Pelodiscus_sinensis
ENSHCOG00000014161	lyn	82	74.370	ENSPMGG00000012711	lyn	89	79.817	Periophthalmus_magnuspinnatus
ENSHCOG00000014161	lyn	99	38.222	ENSPEMG00000007957	Tgs1	99	38.035	Peromyscus_maniculatus_bairdii
ENSHCOG00000014161	lyn	99	38.927	ENSPCIG00000016232	TGS1	97	38.838	Phascolarctos_cinereus
ENSHCOG00000014161	lyn	80	48.050	ENSPFOG00000001545	-	99	47.731	Poecilia_formosa
ENSHCOG00000014161	lyn	92	44.920	ENSPREG00000012261	-	99	44.684	Poecilia_reticulata
ENSHCOG00000014161	lyn	98	38.426	ENSPPYG00000018597	TGS1	98	38.310	Pongo_abelii
ENSHCOG00000014161	lyn	98	38.293	ENSPCAG00000000143	TGS1	98	37.716	Procavia_capensis
ENSHCOG00000014161	lyn	99	39.155	ENSPCOG00000013537	TGS1	99	39.041	Propithecus_coquereli
ENSHCOG00000014161	lyn	85	73.023	ENSPVAG00000016399	TGS1	86	73.023	Pteropus_vampyrus
ENSHCOG00000014161	lyn	95	52.474	ENSPNYG00000023004	lyn	92	52.727	Pundamilia_nyererei
ENSHCOG00000014161	lyn	99	45.888	ENSPNAG00000022249	lyn	99	46.318	Pygocentrus_nattereri
ENSHCOG00000014161	lyn	99	38.330	ENSRNOG00000008156	Tgs1	99	38.594	Rattus_norvegicus
ENSHCOG00000014161	lyn	99	37.457	ENSRBIG00000041893	TGS1	99	37.629	Rhinopithecus_bieti
ENSHCOG00000014161	lyn	99	38.706	ENSRROG00000035127	TGS1	99	38.977	Rhinopithecus_roxellana
ENSHCOG00000014161	lyn	95	36.158	ENSSBOG00000024469	TGS1	99	36.320	Saimiri_boliviensis_boliviensis
ENSHCOG00000014161	lyn	99	39.171	ENSSHAG00000012878	TGS1	99	36.914	Sarcophilus_harrisii
ENSHCOG00000014161	lyn	97	42.891	ENSSFOG00015001308	tgs1	96	43.060	Scleropages_formosus
ENSHCOG00000014161	lyn	100	55.477	ENSSMAG00000019469	lyn	99	55.713	Scophthalmus_maximus
ENSHCOG00000014161	lyn	64	83.333	ENSSLDG00000009024	lyn	86	83.333	Seriola_lalandi_dorsalis
ENSHCOG00000014161	lyn	95	50.063	ENSSPAG00000002170	lyn	97	50.187	Stegastes_partitus
ENSHCOG00000014161	lyn	90	34.898	ENSSSCG00000006251	TGS1	98	35.480	Sus_scrofa
ENSHCOG00000014161	lyn	96	38.963	ENSTGUG00000011050	TGS1	100	38.647	Taeniopygia_guttata
ENSHCOG00000014161	lyn	79	46.288	ENSTRUG00000009532	lyn	86	45.656	Takifugu_rubripes
ENSHCOG00000014161	lyn	90	47.769	ENSTNIG00000018133	lyn	99	48.825	Tetraodon_nigroviridis
ENSHCOG00000014161	lyn	83	78.182	ENSTBEG00000010953	TGS1	84	78.182	Tupaia_belangeri
ENSHCOG00000014161	lyn	79	41.888	ENSTTRG00000017239	TGS1	76	42.152	Tursiops_truncatus
ENSHCOG00000014161	lyn	98	38.300	ENSUAMG00000027718	TGS1	98	38.184	Ursus_americanus
ENSHCOG00000014161	lyn	91	35.866	ENSUMAG00000009761	TGS1	99	35.866	Ursus_maritimus
ENSHCOG00000014161	lyn	67	75.349	ENSVPAG00000001166	TGS1	79	40.560	Vicugna_pacos
ENSHCOG00000014161	lyn	91	36.579	ENSVVUG00000017821	TGS1	99	36.454	Vulpes_vulpes
ENSHCOG00000014161	lyn	99	37.472	ENSXETG00000005648	tgs1	99	36.830	Xenopus_tropicalis