EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000014288 (Gene tree)
Gene ID: 109523441
Gene Symbol: pus1
Alias: wu:fb98h11|zgc:103516
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2723 bases
Position: chrKV880191.1:271482-274204
Accession: 109523441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000024729	PseudoU_synth_1	PF01416.20	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018209	-	1686	XM_019882610	ENSHCOP00000024729	433 (aa)	XP_019738169	UPI00094E06CA

Gene Model

Click here to download ENSHCOG00000014288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014288	pus1	79	71.345	ENSG00000177192	PUS1	88	71.345	Homo_sapiens
ENSHCOG00000014288	pus1	96	77.435	ENSAPOG00000007254	pus1	100	77.435	Acanthochromis_polyacanthus
ENSHCOG00000014288	pus1	90	64.122	ENSAMEG00000013715	PUS1	95	64.122	Ailuropoda_melanoleuca
ENSHCOG00000014288	pus1	95	75.604	ENSACIG00000009169	pus1	99	75.604	Amphilophus_citrinellus
ENSHCOG00000014288	pus1	96	76.247	ENSAOCG00000022207	pus1	100	76.247	Amphiprion_ocellaris
ENSHCOG00000014288	pus1	96	76.247	ENSAPEG00000006039	pus1	99	78.772	Amphiprion_percula
ENSHCOG00000014288	pus1	89	80.051	ENSATEG00000020688	pus1	100	80.051	Anabas_testudineus
ENSHCOG00000014288	pus1	80	70.201	ENSACAG00000007367	PUS1	93	70.201	Anolis_carolinensis
ENSHCOG00000014288	pus1	70	72.277	ENSANAG00000036192	PUS1	93	72.277	Aotus_nancymaae
ENSHCOG00000014288	pus1	96	75.772	ENSACLG00000020868	pus1	100	78.261	Astatotilapia_calliptera
ENSHCOG00000014288	pus1	95	69.398	ENSAMXG00000008710	pus1	96	69.398	Astyanax_mexicanus
ENSHCOG00000014288	pus1	85	66.396	ENSBTAG00000012990	PUS1	92	66.396	Bos_taurus
ENSHCOG00000014288	pus1	82	38.544	WBGene00004248	pus-1	87	38.544	Caenorhabditis_elegans
ENSHCOG00000014288	pus1	59	70.079	ENSCJAG00000003720	PUS1	70	69.767	Callithrix_jacchus
ENSHCOG00000014288	pus1	81	68.555	ENSCAFG00000006429	PUS1	88	68.555	Canis_familiaris
ENSHCOG00000014288	pus1	81	68.555	ENSCAFG00020010737	PUS1	82	68.555	Canis_lupus_dingo
ENSHCOG00000014288	pus1	86	66.400	ENSCHIG00000000487	PUS1	93	66.400	Capra_hircus
ENSHCOG00000014288	pus1	78	71.471	ENSTSYG00000032605	PUS1	93	71.221	Carlito_syrichta
ENSHCOG00000014288	pus1	69	70.903	ENSCAPG00000006421	PUS1	94	70.627	Cavia_aperea
ENSHCOG00000014288	pus1	75	70.462	ENSCPOG00000001027	PUS1	90	62.857	Cavia_porcellus
ENSHCOG00000014288	pus1	78	71.006	ENSCCAG00000015879	PUS1	84	71.803	Cebus_capucinus
ENSHCOG00000014288	pus1	79	71.053	ENSCATG00000032870	PUS1	83	71.803	Cercocebus_atys
ENSHCOG00000014288	pus1	83	65.746	ENSCLAG00000011689	PUS1	86	65.574	Chinchilla_lanigera
ENSHCOG00000014288	pus1	79	71.345	ENSCSAG00000001879	PUS1	79	71.345	Chlorocebus_sabaeus
ENSHCOG00000014288	pus1	73	69.745	ENSCPBG00000024715	PUS1	93	67.781	Chrysemys_picta_bellii
ENSHCOG00000014288	pus1	79	44.606	ENSCING00000009426	-	91	44.606	Ciona_intestinalis
ENSHCOG00000014288	pus1	79	42.330	ENSCSAVG00000003751	-	72	42.330	Ciona_savignyi
ENSHCOG00000014288	pus1	79	62.573	ENSCANG00000035561	PUS1	83	64.610	Colobus_angolensis_palliatus
ENSHCOG00000014288	pus1	80	70.435	ENSCGRG00001019592	Pus1	81	70.435	Cricetulus_griseus_chok1gshd
ENSHCOG00000014288	pus1	80	70.435	ENSCGRG00000004048	Pus1	87	70.435	Cricetulus_griseus_crigri
ENSHCOG00000014288	pus1	96	71.021	ENSCSEG00000003629	pus1	100	71.021	Cynoglossus_semilaevis
ENSHCOG00000014288	pus1	96	75.540	ENSCVAG00000001265	pus1	100	75.540	Cyprinodon_variegatus
ENSHCOG00000014288	pus1	82	70.027	ENSDARG00000045562	pus1	97	74.265	Danio_rerio
ENSHCOG00000014288	pus1	75	70.370	ENSDNOG00000045576	PUS1	94	70.261	Dasypus_novemcinctus
ENSHCOG00000014288	pus1	75	67.890	ENSDORG00000011455	Pus1	100	67.890	Dipodomys_ordii
ENSHCOG00000014288	pus1	80	45.272	FBgn0038811	PUS1	83	45.272	Drosophila_melanogaster
ENSHCOG00000014288	pus1	90	63.333	ENSETEG00000019160	PUS1	96	63.104	Echinops_telfairi
ENSHCOG00000014288	pus1	74	44.315	ENSEBUG00000000368	-	65	43.333	Eptatretus_burgeri
ENSHCOG00000014288	pus1	80	69.452	ENSEASG00005016535	PUS1	80	69.452	Equus_asinus_asinus
ENSHCOG00000014288	pus1	81	69.122	ENSECAG00000006965	PUS1	88	69.122	Equus_caballus
ENSHCOG00000014288	pus1	91	69.727	ENSELUG00000010424	pus1	99	70.332	Esox_lucius
ENSHCOG00000014288	pus1	83	68.245	ENSFCAG00000010780	PUS1	84	68.245	Felis_catus
ENSHCOG00000014288	pus1	89	64.646	ENSFALG00000008273	PUS1	93	64.646	Ficedula_albicollis
ENSHCOG00000014288	pus1	76	71.429	ENSFDAG00000012518	PUS1	80	71.429	Fukomys_damarensis
ENSHCOG00000014288	pus1	96	75.418	ENSFHEG00000010504	pus1	100	75.418	Fundulus_heteroclitus
ENSHCOG00000014288	pus1	86	73.600	ENSGMOG00000008143	pus1	96	73.600	Gadus_morhua
ENSHCOG00000014288	pus1	92	65.347	ENSGALG00000002354	PUS1	97	65.347	Gallus_gallus
ENSHCOG00000014288	pus1	96	75.895	ENSGAFG00000006578	pus1	100	75.895	Gambusia_affinis
ENSHCOG00000014288	pus1	96	74.822	ENSGACG00000017566	pus1	99	78.005	Gasterosteus_aculeatus
ENSHCOG00000014288	pus1	76	67.781	ENSGAGG00000016730	-	94	67.781	Gopherus_agassizii
ENSHCOG00000014288	pus1	79	72.222	ENSGGOG00000009178	PUS1	81	73.115	Gorilla_gorilla
ENSHCOG00000014288	pus1	96	76.247	ENSHBUG00000001316	pus1	100	78.772	Haplochromis_burtoni
ENSHCOG00000014288	pus1	83	65.278	ENSHGLG00000016086	PUS1	98	62.760	Heterocephalus_glaber_female
ENSHCOG00000014288	pus1	83	65.000	ENSHGLG00100019362	PUS1	98	62.500	Heterocephalus_glaber_male
ENSHCOG00000014288	pus1	89	74.677	ENSIPUG00000010387	pus1	91	77.686	Ictalurus_punctatus
ENSHCOG00000014288	pus1	77	70.783	ENSSTOG00000011245	PUS1	78	70.783	Ictidomys_tridecemlineatus
ENSHCOG00000014288	pus1	90	63.959	ENSJJAG00000000088	Pus1	93	63.959	Jaculus_jaculus
ENSHCOG00000014288	pus1	96	73.397	ENSKMAG00000012702	pus1	100	73.397	Kryptolebias_marmoratus
ENSHCOG00000014288	pus1	93	73.956	ENSLBEG00000002845	pus1	99	73.956	Labrus_bergylta
ENSHCOG00000014288	pus1	83	64.463	ENSLACG00000018598	PUS1	94	62.533	Latimeria_chalumnae
ENSHCOG00000014288	pus1	74	57.321	ENSLACG00000016044	-	97	57.321	Latimeria_chalumnae
ENSHCOG00000014288	pus1	88	66.580	ENSLOCG00000006127	pus1	97	66.580	Lepisosteus_oculatus
ENSHCOG00000014288	pus1	80	68.986	ENSLAFG00000028731	PUS1	92	68.986	Loxodonta_africana
ENSHCOG00000014288	pus1	79	71.053	ENSMFAG00000041194	PUS1	83	72.131	Macaca_fascicularis
ENSHCOG00000014288	pus1	79	71.345	ENSMMUG00000031463	PUS1	87	72.131	Macaca_mulatta
ENSHCOG00000014288	pus1	79	71.345	ENSMNEG00000002814	PUS1	83	72.131	Macaca_nemestrina
ENSHCOG00000014288	pus1	70	72.277	ENSMLEG00000043560	PUS1	93	72.277	Mandrillus_leucophaeus
ENSHCOG00000014288	pus1	96	74.109	ENSMAMG00000007371	pus1	100	74.109	Mastacembelus_armatus
ENSHCOG00000014288	pus1	96	76.010	ENSMZEG00005017746	pus1	100	76.010	Maylandia_zebra
ENSHCOG00000014288	pus1	59	30.325	ENSMGAG00000000851	PUS3	65	30.325	Meleagris_gallopavo
ENSHCOG00000014288	pus1	72	73.718	ENSMGAG00000001958	PUS1	95	73.718	Meleagris_gallopavo
ENSHCOG00000014288	pus1	80	70.725	ENSMAUG00000001482	Pus1	81	70.725	Mesocricetus_auratus
ENSHCOG00000014288	pus1	81	69.516	ENSMICG00000030980	PUS1	83	71.772	Microcebus_murinus
ENSHCOG00000014288	pus1	78	71.091	ENSMOCG00000022311	Pus1	80	71.091	Microtus_ochrogaster
ENSHCOG00000014288	pus1	89	74.677	ENSMMOG00000021022	pus1	99	74.677	Mola_mola
ENSHCOG00000014288	pus1	76	68.580	ENSMODG00000015551	PUS1	78	66.667	Monodelphis_domestica
ENSHCOG00000014288	pus1	96	75.000	ENSMALG00000013202	pus1	99	75.000	Monopterus_albus
ENSHCOG00000014288	pus1	80	70.725	MGP_CAROLIEiJ_G0027551	Pus1	87	70.725	Mus_caroli
ENSHCOG00000014288	pus1	80	70.725	ENSMUSG00000029507	Pus1	87	70.725	Mus_musculus
ENSHCOG00000014288	pus1	80	70.690	MGP_PahariEiJ_G0024133	Pus1	88	70.690	Mus_pahari
ENSHCOG00000014288	pus1	80	70.725	MGP_SPRETEiJ_G0028549	Pus1	87	70.725	Mus_spretus
ENSHCOG00000014288	pus1	80	68.497	ENSMPUG00000002314	PUS1	88	68.497	Mustela_putorius_furo
ENSHCOG00000014288	pus1	81	66.571	ENSMLUG00000015790	PUS1	96	66.571	Myotis_lucifugus
ENSHCOG00000014288	pus1	80	71.014	ENSNGAG00000012976	Pus1	81	71.014	Nannospalax_galili
ENSHCOG00000014288	pus1	89	78.517	ENSNBRG00000020502	pus1	99	79.733	Neolamprologus_brichardi
ENSHCOG00000014288	pus1	79	69.591	ENSNLEG00000008505	PUS1	92	72.789	Nomascus_leucogenys
ENSHCOG00000014288	pus1	55	30.435	ENSMEUG00000014040	PUS3	50	30.435	Notamacropus_eugenii
ENSHCOG00000014288	pus1	75	63.077	ENSMEUG00000002825	PUS1	88	63.077	Notamacropus_eugenii
ENSHCOG00000014288	pus1	77	60.778	ENSOPRG00000002701	-	87	60.778	Ochotona_princeps
ENSHCOG00000014288	pus1	87	64.737	ENSODEG00000008248	PUS1	96	66.120	Octodon_degus
ENSHCOG00000014288	pus1	90	77.834	ENSONIG00000003803	pus1	100	77.834	Oreochromis_niloticus
ENSHCOG00000014288	pus1	80	68.103	ENSOANG00000010619	PUS1	96	60.900	Ornithorhynchus_anatinus
ENSHCOG00000014288	pus1	76	70.303	ENSOCUG00000007310	PUS1	72	69.760	Oryctolagus_cuniculus
ENSHCOG00000014288	pus1	96	74.524	ENSORLG00000010787	pus1	100	74.524	Oryzias_latipes
ENSHCOG00000014288	pus1	96	74.524	ENSORLG00020011483	pus1	100	74.524	Oryzias_latipes_hni
ENSHCOG00000014288	pus1	96	74.524	ENSORLG00015023012	pus1	99	77.062	Oryzias_latipes_hsok
ENSHCOG00000014288	pus1	95	74.818	ENSOMEG00000022655	pus1	97	74.818	Oryzias_melastigma
ENSHCOG00000014288	pus1	76	72.036	ENSOGAG00000008720	PUS1	86	71.772	Otolemur_garnettii
ENSHCOG00000014288	pus1	86	66.400	ENSOARG00000013316	PUS1	86	66.400	Ovis_aries
ENSHCOG00000014288	pus1	79	71.637	ENSPPAG00000040971	PUS1	81	72.787	Pan_paniscus
ENSHCOG00000014288	pus1	80	69.364	ENSPPRG00000015456	PUS1	87	69.364	Panthera_pardus
ENSHCOG00000014288	pus1	80	69.452	ENSPTIG00000004201	PUS1	90	69.364	Panthera_tigris_altaica
ENSHCOG00000014288	pus1	78	71.554	ENSPTRG00000005643	PUS1	81	72.697	Pan_troglodytes
ENSHCOG00000014288	pus1	78	71.261	ENSPANG00000000376	PUS1	83	72.039	Papio_anubis
ENSHCOG00000014288	pus1	78	69.027	ENSPKIG00000019369	pus1	78	68.406	Paramormyrops_kingsleyae
ENSHCOG00000014288	pus1	86	65.092	ENSPSIG00000016432	PUS1	94	63.275	Pelodiscus_sinensis
ENSHCOG00000014288	pus1	86	76.944	ENSPMGG00000004522	pus1	97	76.819	Periophthalmus_magnuspinnatus
ENSHCOG00000014288	pus1	80	70.145	ENSPEMG00000013448	Pus1	81	70.145	Peromyscus_maniculatus_bairdii
ENSHCOG00000014288	pus1	75	60.308	ENSPMAG00000004636	pus1	98	60.308	Petromyzon_marinus
ENSHCOG00000014288	pus1	70	60.465	ENSPCIG00000022609	-	75	58.413	Phascolarctos_cinereus
ENSHCOG00000014288	pus1	96	74.940	ENSPFOG00000019669	pus1	100	74.940	Poecilia_formosa
ENSHCOG00000014288	pus1	96	74.940	ENSPLAG00000007185	pus1	100	74.940	Poecilia_latipinna
ENSHCOG00000014288	pus1	96	74.940	ENSPLAG00000002692	-	100	74.940	Poecilia_latipinna
ENSHCOG00000014288	pus1	96	74.702	ENSPMEG00000011115	PUS1	100	74.702	Poecilia_mexicana
ENSHCOG00000014288	pus1	94	75.061	ENSPMEG00000006038	pus1	98	76.456	Poecilia_mexicana
ENSHCOG00000014288	pus1	91	76.203	ENSPREG00000007231	pus1	99	79.666	Poecilia_reticulata
ENSHCOG00000014288	pus1	78	70.968	ENSPPYG00000005132	PUS1	79	70.968	Pongo_abelii
ENSHCOG00000014288	pus1	61	66.541	ENSPCAG00000009110	-	65	66.541	Procavia_capensis
ENSHCOG00000014288	pus1	74	65.517	ENSPCOG00000015595	PUS1	81	63.554	Propithecus_coquereli
ENSHCOG00000014288	pus1	96	76.010	ENSPNYG00000013571	pus1	100	76.010	Pundamilia_nyererei
ENSHCOG00000014288	pus1	88	72.987	ENSPNAG00000003938	pus1	91	72.987	Pygocentrus_nattereri
ENSHCOG00000014288	pus1	80	70.145	ENSRNOG00000037500	Pus1	81	70.145	Rattus_norvegicus
ENSHCOG00000014288	pus1	79	71.345	ENSRBIG00000043177	PUS1	85	72.459	Rhinopithecus_bieti
ENSHCOG00000014288	pus1	79	71.345	ENSRROG00000039744	PUS1	82	72.954	Rhinopithecus_roxellana
ENSHCOG00000014288	pus1	76	43.836	YPL212C	-	60	43.836	Saccharomyces_cerevisiae
ENSHCOG00000014288	pus1	59	30.450	ENSSBOG00000022433	PUS3	53	30.450	Saimiri_boliviensis_boliviensis
ENSHCOG00000014288	pus1	79	70.725	ENSSBOG00000023593	PUS1	87	71.475	Saimiri_boliviensis_boliviensis
ENSHCOG00000014288	pus1	59	30.976	ENSSHAG00000001382	PUS3	54	30.976	Sarcophilus_harrisii
ENSHCOG00000014288	pus1	82	66.572	ENSSHAG00000013193	PUS1	86	66.572	Sarcophilus_harrisii
ENSHCOG00000014288	pus1	92	64.439	ENSSFOG00015003463	pus1	94	64.439	Scleropages_formosus
ENSHCOG00000014288	pus1	96	74.109	ENSSMAG00000019075	pus1	100	74.109	Scophthalmus_maximus
ENSHCOG00000014288	pus1	96	75.297	ENSSDUG00000007102	pus1	100	75.297	Seriola_dumerili
ENSHCOG00000014288	pus1	96	74.822	ENSSLDG00000022850	pus1	100	74.822	Seriola_lalandi_dorsalis
ENSHCOG00000014288	pus1	70	61.716	ENSSARG00000008367	PUS1	98	61.716	Sorex_araneus
ENSHCOG00000014288	pus1	87	66.667	ENSSPUG00000010009	PUS1	95	66.667	Sphenodon_punctatus
ENSHCOG00000014288	pus1	89	81.074	ENSSPAG00000006272	pus1	99	81.074	Stegastes_partitus
ENSHCOG00000014288	pus1	80	69.540	ENSSSCG00000009741	PUS1	87	69.540	Sus_scrofa
ENSHCOG00000014288	pus1	76	72.340	ENSTGUG00000008068	PUS1	99	72.340	Taeniopygia_guttata
ENSHCOG00000014288	pus1	83	78.552	ENSTRUG00000002198	pus1	89	79.827	Takifugu_rubripes
ENSHCOG00000014288	pus1	89	71.503	ENSTNIG00000003942	pus1	94	73.458	Tetraodon_nigroviridis
ENSHCOG00000014288	pus1	81	66.761	ENSTTRG00000000632	PUS1	83	66.761	Tursiops_truncatus
ENSHCOG00000014288	pus1	79	69.388	ENSUAMG00000017197	PUS1	87	69.388	Ursus_americanus
ENSHCOG00000014288	pus1	79	69.388	ENSUMAG00000002831	PUS1	95	71.519	Ursus_maritimus
ENSHCOG00000014288	pus1	81	68.466	ENSVVUG00000004199	PUS1	80	68.466	Vulpes_vulpes
ENSHCOG00000014288	pus1	61	30.450	ENSXETG00000024532	pus3	50	30.450	Xenopus_tropicalis
ENSHCOG00000014288	pus1	74	50.000	ENSXETG00000033640	-	99	50.000	Xenopus_tropicalis
ENSHCOG00000014288	pus1	82	66.667	ENSXETG00000002030	pus1	89	66.667	Xenopus_tropicalis
ENSHCOG00000014288	pus1	91	77.975	ENSXCOG00000004722	pus1	97	80.106	Xiphophorus_couchianus
ENSHCOG00000014288	pus1	96	76.134	ENSXMAG00000000988	pus1	100	76.134	Xiphophorus_maculatus