EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000014418 (Gene tree)
Gene ID: 109514854
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4729 bases
Position: chrKV879887.1:958364-963092
Accession: 109514854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000024779	GTP_EFTU	PF00009.27	3e-55	1	1
ENSHCOP00000011557	GTP_EFTU	PF00009.27	3.2e-55	1	1
ENSHCOP00000024779	GTP_EFTU_D2	PF03144.25	6.5e-14	1	1
ENSHCOP00000011557	GTP_EFTU_D2	PF03144.25	6.8e-14	1	1
ENSHCOP00000024779	GTP_EFTU_D3	PF03143.17	1.2e-25	1	1
ENSHCOP00000011557	GTP_EFTU_D3	PF03143.17	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018311	-	1751	XM_019868260	ENSHCOP00000011557	445 (aa)	XP_019723819	UPI00094E726A
ENSHCOT00000018295	-	1299	-	ENSHCOP00000024779	432 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000014418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000014418	tufm	90	31.333	ENSHCOG00000014718	eef1a1b	95	31.333
ENSHCOG00000014418	tufm	90	30.134	ENSHCOG00000008489	-	95	30.134
ENSHCOG00000014418	tufm	90	30.531	ENSHCOG00000008468	-	96	30.531
ENSHCOG00000014418	tufm	90	30.045	ENSHCOG00000001215	si:dkey-37o8.1	98	30.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014418	tufm	94	79.853	ENSG00000178952	TUFM	98	75.839	Homo_sapiens
ENSHCOG00000014418	tufm	99	93.034	ENSAPOG00000013385	tufm	99	93.034	Acanthochromis_polyacanthus
ENSHCOG00000014418	tufm	98	79.009	ENSAMEG00000015551	TUFM	93	79.009	Ailuropoda_melanoleuca
ENSHCOG00000014418	tufm	97	91.667	ENSACIG00000007388	tufm	97	91.667	Amphilophus_citrinellus
ENSHCOG00000014418	tufm	99	92.809	ENSAOCG00000001032	tufm	99	92.809	Amphiprion_ocellaris
ENSHCOG00000014418	tufm	99	92.809	ENSAPEG00000015751	tufm	99	92.809	Amphiprion_percula
ENSHCOG00000014418	tufm	99	90.787	ENSATEG00000002905	tufm	97	90.787	Anabas_testudineus
ENSHCOG00000014418	tufm	99	79.587	ENSACAG00000005399	TUFM	97	77.556	Anolis_carolinensis
ENSHCOG00000014418	tufm	99	76.636	ENSANAG00000022206	TUFM	98	74.049	Aotus_nancymaae
ENSHCOG00000014418	tufm	99	92.081	ENSACLG00000007403	tufm	92	92.081	Astatotilapia_calliptera
ENSHCOG00000014418	tufm	99	78.505	ENSBTAG00000019216	TUFM	99	76.063	Bos_taurus
ENSHCOG00000014418	tufm	97	56.368	WBGene00007000	tufm-1	86	55.944	Caenorhabditis_elegans
ENSHCOG00000014418	tufm	99	76.869	ENSCJAG00000006236	TUFM	99	74.165	Callithrix_jacchus
ENSHCOG00000014418	tufm	98	79.009	ENSCAFG00000017216	TUFM	99	76.286	Canis_familiaris
ENSHCOG00000014418	tufm	98	79.009	ENSCAFG00020017574	TUFM	99	76.286	Canis_lupus_dingo
ENSHCOG00000014418	tufm	99	78.738	ENSCHIG00000020583	TUFM	99	76.286	Capra_hircus
ENSHCOG00000014418	tufm	98	79.245	ENSTSYG00000026053	TUFM	98	76.510	Carlito_syrichta
ENSHCOG00000014418	tufm	98	79.245	ENSCPOG00000010534	TUFM	99	76.063	Cavia_porcellus
ENSHCOG00000014418	tufm	99	76.636	ENSCCAG00000033296	TUFM	98	74.273	Cebus_capucinus
ENSHCOG00000014418	tufm	98	78.774	ENSCATG00000035822	TUFM	99	75.501	Cercocebus_atys
ENSHCOG00000014418	tufm	99	78.271	ENSCLAG00000013969	TUFM	95	78.271	Chinchilla_lanigera
ENSHCOG00000014418	tufm	98	78.302	ENSCSAG00000006314	TUFM	93	78.302	Chlorocebus_sabaeus
ENSHCOG00000014418	tufm	98	79.717	ENSCHOG00000009077	TUFM	98	76.957	Choloepus_hoffmanni
ENSHCOG00000014418	tufm	95	83.252	ENSCPBG00000003874	TUFM	96	79.458	Chrysemys_picta_bellii
ENSHCOG00000014418	tufm	93	59.102	ENSCING00000002841	-	93	59.102	Ciona_intestinalis
ENSHCOG00000014418	tufm	99	57.859	ENSCSAVG00000009380	-	93	58.411	Ciona_savignyi
ENSHCOG00000014418	tufm	98	78.302	ENSCANG00000035829	TUFM	93	78.302	Colobus_angolensis_palliatus
ENSHCOG00000014418	tufm	98	78.538	ENSCGRG00001022949	Tufm	99	75.391	Cricetulus_griseus_chok1gshd
ENSHCOG00000014418	tufm	98	54.673	ENSCGRG00000013193	-	94	54.673	Cricetulus_griseus_crigri
ENSHCOG00000014418	tufm	98	78.538	ENSCGRG00000001868	-	99	75.391	Cricetulus_griseus_crigri
ENSHCOG00000014418	tufm	99	86.966	ENSCSEG00000013841	tufm	99	86.966	Cynoglossus_semilaevis
ENSHCOG00000014418	tufm	99	93.483	ENSCVAG00000006251	tufm	99	93.483	Cyprinodon_variegatus
ENSHCOG00000014418	tufm	99	82.393	ENSDARG00000104173	tufm	99	82.393	Danio_rerio
ENSHCOG00000014418	tufm	98	76.636	ENSDNOG00000047636	TUFM	99	74.058	Dasypus_novemcinctus
ENSHCOG00000014418	tufm	86	68.633	ENSDORG00000023544	-	89	68.633	Dipodomys_ordii
ENSHCOG00000014418	tufm	94	70.516	FBgn0024556	mEFTu1	83	70.516	Drosophila_melanogaster
ENSHCOG00000014418	tufm	87	64.628	ENSETEG00000009601	TUFM	94	64.628	Echinops_telfairi
ENSHCOG00000014418	tufm	94	72.840	ENSEBUG00000015907	tufm	66	73.086	Eptatretus_burgeri
ENSHCOG00000014418	tufm	98	78.774	ENSEASG00005015477	TUFM	98	76.457	Equus_asinus_asinus
ENSHCOG00000014418	tufm	98	78.774	ENSECAG00000019763	TUFM	99	76.457	Equus_caballus
ENSHCOG00000014418	tufm	86	76.613	ENSEEUG00000001402	TUFM	93	76.613	Erinaceus_europaeus
ENSHCOG00000014418	tufm	99	87.025	ENSELUG00000013410	tufm	96	87.025	Esox_lucius
ENSHCOG00000014418	tufm	98	78.774	ENSFCAG00000003103	TUFM	64	75.839	Felis_catus
ENSHCOG00000014418	tufm	91	74.619	ENSFDAG00000010881	TUFM	98	76.206	Fukomys_damarensis
ENSHCOG00000014418	tufm	97	85.680	ENSFHEG00000020646	tufm	93	85.680	Fundulus_heteroclitus
ENSHCOG00000014418	tufm	99	86.966	ENSGMOG00000014616	tufm	99	86.966	Gadus_morhua
ENSHCOG00000014418	tufm	99	92.135	ENSGAFG00000004682	tufm	99	92.135	Gambusia_affinis
ENSHCOG00000014418	tufm	99	90.315	ENSGACG00000012961	tufm	99	90.315	Gasterosteus_aculeatus
ENSHCOG00000014418	tufm	98	80.778	ENSGAGG00000006132	TUFM	99	83.791	Gopherus_agassizii
ENSHCOG00000014418	tufm	94	79.853	ENSGGOG00000014136	TUFM	98	75.839	Gorilla_gorilla
ENSHCOG00000014418	tufm	99	92.534	ENSHBUG00000019031	tufm	92	92.534	Haplochromis_burtoni
ENSHCOG00000014418	tufm	98	77.594	ENSHGLG00000006613	TUFM	94	77.594	Heterocephalus_glaber_female
ENSHCOG00000014418	tufm	98	73.821	ENSHGLG00100004096	TUFM	94	73.821	Heterocephalus_glaber_male
ENSHCOG00000014418	tufm	99	86.067	ENSIPUG00000022457	tufm	99	86.067	Ictalurus_punctatus
ENSHCOG00000014418	tufm	95	47.685	ENSIPUG00000020682	-	89	56.369	Ictalurus_punctatus
ENSHCOG00000014418	tufm	98	79.481	ENSSTOG00000011837	TUFM	99	76.063	Ictidomys_tridecemlineatus
ENSHCOG00000014418	tufm	98	78.538	ENSJJAG00000011840	Tufm	98	75.281	Jaculus_jaculus
ENSHCOG00000014418	tufm	99	88.539	ENSKMAG00000009794	tufm	99	88.539	Kryptolebias_marmoratus
ENSHCOG00000014418	tufm	99	89.865	ENSLBEG00000023735	tufm	99	89.865	Labrus_bergylta
ENSHCOG00000014418	tufm	97	83.452	ENSLACG00000008242	TUFM	97	80.995	Latimeria_chalumnae
ENSHCOG00000014418	tufm	98	75.472	ENSLAFG00000028911	TUFM	94	75.472	Loxodonta_africana
ENSHCOG00000014418	tufm	98	78.774	ENSMFAG00000033739	TUFM	99	75.501	Macaca_fascicularis
ENSHCOG00000014418	tufm	98	78.774	ENSMMUG00000003303	TUFM	99	75.501	Macaca_mulatta
ENSHCOG00000014418	tufm	98	78.774	ENSMNEG00000006031	TUFM	99	75.501	Macaca_nemestrina
ENSHCOG00000014418	tufm	98	78.774	ENSMLEG00000042133	TUFM	99	75.501	Mandrillus_leucophaeus
ENSHCOG00000014418	tufm	99	91.011	ENSMAMG00000002053	tufm	99	91.011	Mastacembelus_armatus
ENSHCOG00000014418	tufm	99	92.308	ENSMZEG00005010857	tufm	92	92.308	Maylandia_zebra
ENSHCOG00000014418	tufm	98	79.009	ENSMAUG00000010490	Tufm	99	75.839	Mesocricetus_auratus
ENSHCOG00000014418	tufm	98	78.404	ENSMICG00000007650	TUFM	99	75.501	Microcebus_murinus
ENSHCOG00000014418	tufm	98	78.538	ENSMOCG00000010051	Tufm	99	75.615	Microtus_ochrogaster
ENSHCOG00000014418	tufm	97	91.408	ENSMMOG00000012344	tufm	96	89.145	Mola_mola
ENSHCOG00000014418	tufm	96	79.759	ENSMODG00000015564	TUFM	92	79.759	Monodelphis_domestica
ENSHCOG00000014418	tufm	99	88.939	ENSMALG00000020254	tufm	99	88.939	Monopterus_albus
ENSHCOG00000014418	tufm	99	78.505	MGP_CAROLIEiJ_G0030449	-	99	75.839	Mus_caroli
ENSHCOG00000014418	tufm	99	78.505	MGP_CAROLIEiJ_G0030448	-	98	82.456	Mus_caroli
ENSHCOG00000014418	tufm	99	78.505	ENSMUSG00000073838	Tufm	98	82.456	Mus_musculus
ENSHCOG00000014418	tufm	99	78.738	MGP_PahariEiJ_G0013658	-	98	82.456	Mus_pahari
ENSHCOG00000014418	tufm	99	78.738	MGP_PahariEiJ_G0013659	-	99	76.063	Mus_pahari
ENSHCOG00000014418	tufm	99	78.738	MGP_SPRETEiJ_G0031562	-	98	83.333	Mus_spretus
ENSHCOG00000014418	tufm	99	72.473	MGP_SPRETEiJ_G0031563	-	99	70.248	Mus_spretus
ENSHCOG00000014418	tufm	83	79.722	ENSMPUG00000012816	TUFM	97	79.235	Mustela_putorius_furo
ENSHCOG00000014418	tufm	98	78.066	ENSMLUG00000012335	-	94	78.066	Myotis_lucifugus
ENSHCOG00000014418	tufm	98	78.774	ENSNGAG00000008610	Tufm	99	75.839	Nannospalax_galili
ENSHCOG00000014418	tufm	84	92.308	ENSNBRG00000006466	tufm	95	93.296	Neolamprologus_brichardi
ENSHCOG00000014418	tufm	98	73.882	ENSNLEG00000011063	TUFM	98	71.205	Nomascus_leucogenys
ENSHCOG00000014418	tufm	80	79.827	ENSMEUG00000011131	TUFM	100	79.827	Notamacropus_eugenii
ENSHCOG00000014418	tufm	98	68.160	ENSOPRG00000002318	-	97	65.541	Ochotona_princeps
ENSHCOG00000014418	tufm	99	92.584	ENSONIG00000019389	tufm	99	92.584	Oreochromis_niloticus
ENSHCOG00000014418	tufm	97	80.144	ENSOANG00000013114	TUFM	96	80.144	Ornithorhynchus_anatinus
ENSHCOG00000014418	tufm	99	78.505	ENSOCUG00000002683	TUFM	94	78.505	Oryctolagus_cuniculus
ENSHCOG00000014418	tufm	99	91.236	ENSORLG00000011497	tufm	99	91.236	Oryzias_latipes
ENSHCOG00000014418	tufm	99	91.461	ENSORLG00020013437	tufm	99	91.461	Oryzias_latipes_hni
ENSHCOG00000014418	tufm	99	91.461	ENSORLG00015003107	tufm	99	91.461	Oryzias_latipes_hsok
ENSHCOG00000014418	tufm	99	91.910	ENSOMEG00000016958	tufm	99	91.910	Oryzias_melastigma
ENSHCOG00000014418	tufm	98	79.009	ENSOGAG00000006875	TUFM	99	75.724	Otolemur_garnettii
ENSHCOG00000014418	tufm	92	80.905	ENSOARG00000002357	TUFM	96	80.905	Ovis_aries
ENSHCOG00000014418	tufm	94	79.853	ENSPPAG00000035168	TUFM	98	75.676	Pan_paniscus
ENSHCOG00000014418	tufm	98	78.774	ENSPPRG00000014248	TUFM	99	75.501	Panthera_pardus
ENSHCOG00000014418	tufm	96	79.177	ENSPTIG00000009980	TUFM	99	78.043	Panthera_tigris_altaica
ENSHCOG00000014418	tufm	94	79.853	ENSPTRG00000007939	TUFM	98	75.839	Pan_troglodytes
ENSHCOG00000014418	tufm	98	78.538	ENSPANG00000019624	TUFM	99	75.278	Papio_anubis
ENSHCOG00000014418	tufm	99	84.340	ENSPKIG00000023809	tufm	98	84.340	Paramormyrops_kingsleyae
ENSHCOG00000014418	tufm	72	80.323	ENSPSIG00000005302	TUFM	98	80.323	Pelodiscus_sinensis
ENSHCOG00000014418	tufm	97	91.169	ENSPMGG00000015631	tufm	99	91.367	Periophthalmus_magnuspinnatus
ENSHCOG00000014418	tufm	98	78.538	ENSPEMG00000012208	Tufm	99	75.615	Peromyscus_maniculatus_bairdii
ENSHCOG00000014418	tufm	96	78.795	ENSPCIG00000025208	TUFM	99	74.501	Phascolarctos_cinereus
ENSHCOG00000014418	tufm	99	89.842	ENSPFOG00000007043	tufm	99	89.842	Poecilia_formosa
ENSHCOG00000014418	tufm	99	88.372	ENSPLAG00000014372	tufm	98	87.104	Poecilia_latipinna
ENSHCOG00000014418	tufm	99	89.019	ENSPMEG00000014520	-	99	88.679	Poecilia_mexicana
ENSHCOG00000014418	tufm	99	90.068	ENSPMEG00000019508	tufm	99	90.068	Poecilia_mexicana
ENSHCOG00000014418	tufm	99	90.068	ENSPREG00000013913	tufm	99	90.068	Poecilia_reticulata
ENSHCOG00000014418	tufm	98	77.830	ENSPPYG00000007226	TUFM	98	74.944	Pongo_abelii
ENSHCOG00000014418	tufm	99	72.196	ENSPCAG00000015294	TUFM	94	72.196	Procavia_capensis
ENSHCOG00000014418	tufm	98	77.934	ENSPCOG00000012267	TUFM	99	75.278	Propithecus_coquereli
ENSHCOG00000014418	tufm	99	92.308	ENSPNYG00000008905	tufm	99	92.308	Pundamilia_nyererei
ENSHCOG00000014418	tufm	99	88.315	ENSPNAG00000018881	tufm	99	88.315	Pygocentrus_nattereri
ENSHCOG00000014418	tufm	99	78.738	ENSRNOG00000018604	Tufm	99	76.063	Rattus_norvegicus
ENSHCOG00000014418	tufm	95	76.998	ENSRBIG00000042008	-	92	76.998	Rhinopithecus_bieti
ENSHCOG00000014418	tufm	59	78.656	ENSRBIG00000036713	-	93	78.656	Rhinopithecus_bieti
ENSHCOG00000014418	tufm	65	75.714	ENSRROG00000044977	-	76	75.714	Rhinopithecus_roxellana
ENSHCOG00000014418	tufm	98	78.774	ENSRROG00000036858	-	93	78.774	Rhinopithecus_roxellana
ENSHCOG00000014418	tufm	98	59.767	YOR187W	TUF1	99	58.864	Saccharomyces_cerevisiae
ENSHCOG00000014418	tufm	99	76.636	ENSSBOG00000026542	TUFM	95	76.636	Saimiri_boliviensis_boliviensis
ENSHCOG00000014418	tufm	96	79.759	ENSSHAG00000012121	TUFM	96	79.903	Sarcophilus_harrisii
ENSHCOG00000014418	tufm	99	83.669	ENSSFOG00015013352	tufm	99	83.669	Scleropages_formosus
ENSHCOG00000014418	tufm	99	90.787	ENSSMAG00000010053	tufm	99	90.787	Scophthalmus_maximus
ENSHCOG00000014418	tufm	99	92.135	ENSSDUG00000016896	tufm	99	92.135	Seriola_dumerili
ENSHCOG00000014418	tufm	99	91.910	ENSSLDG00000006494	tufm	99	91.910	Seriola_lalandi_dorsalis
ENSHCOG00000014418	tufm	86	77.688	ENSSARG00000011228	TUFM	98	77.688	Sorex_araneus
ENSHCOG00000014418	tufm	97	71.963	ENSSPUG00000016312	TUFM	99	71.963	Sphenodon_punctatus
ENSHCOG00000014418	tufm	99	92.063	ENSSPAG00000009936	tufm	98	92.063	Stegastes_partitus
ENSHCOG00000014418	tufm	98	79.009	ENSSSCG00000007803	TUFM	99	75.947	Sus_scrofa
ENSHCOG00000014418	tufm	99	89.438	ENSTRUG00000008300	tufm	99	89.438	Takifugu_rubripes
ENSHCOG00000014418	tufm	98	75.822	ENSTBEG00000015029	TUFM	93	76.526	Tupaia_belangeri
ENSHCOG00000014418	tufm	59	77.821	ENSTTRG00000005930	-	57	77.821	Tursiops_truncatus
ENSHCOG00000014418	tufm	64	78.182	ENSTTRG00000001980	-	100	78.182	Tursiops_truncatus
ENSHCOG00000014418	tufm	98	78.302	ENSUAMG00000001471	TUFM	99	76.063	Ursus_americanus
ENSHCOG00000014418	tufm	93	80.798	ENSUMAG00000009341	TUFM	99	80.798	Ursus_maritimus
ENSHCOG00000014418	tufm	64	77.455	ENSVPAG00000009541	TUFM	100	77.455	Vicugna_pacos
ENSHCOG00000014418	tufm	98	78.774	ENSVVUG00000024170	TUFM	99	76.063	Vulpes_vulpes
ENSHCOG00000014418	tufm	86	52.480	ENSXETG00000028019	-	78	90.426	Xenopus_tropicalis
ENSHCOG00000014418	tufm	96	93.269	ENSXMAG00000011848	tufm	99	91.183	Xiphophorus_maculatus