EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000014827 (Gene tree)
Gene ID: -
Gene Symbol: polr2j
Alias: rpb11|zgc:110005
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2186 bases
Position: chrKV880150.1:408865-411050
Accession: 109522404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011908	RNA_pol_L_2	PF13656.6	8e-29	1	1
ENSHCOP00000011908	RNA_pol_L	PF01193.24	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018784	-	519	XM_019880943	ENSHCOP00000011908	172 (aa)	XP_019736502	-

Gene Model

Click here to download ENSHCOG00000014827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000014827	polr2j	59	37.383	ENSHCOG00000003258	polr1d	94	37.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014827	polr2j	96	68.072	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSHCOG00000014827	polr2j	62	92.523	ENSG00000228049	POLR2J2	94	89.908	Homo_sapiens
ENSHCOG00000014827	polr2j	68	97.436	ENSAPOG00000019538	polr2j	100	97.436	Acanthochromis_polyacanthus
ENSHCOG00000014827	polr2j	68	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSHCOG00000014827	polr2j	63	74.545	ENSACIG00000014549	POLR2J2	91	74.545	Amphilophus_citrinellus
ENSHCOG00000014827	polr2j	68	96.581	ENSAOCG00000006937	polr2j	100	96.581	Amphiprion_ocellaris
ENSHCOG00000014827	polr2j	68	97.436	ENSAPEG00000021761	polr2j	100	97.436	Amphiprion_percula
ENSHCOG00000014827	polr2j	68	97.436	ENSATEG00000013312	-	100	97.436	Anabas_testudineus
ENSHCOG00000014827	polr2j	68	97.436	ENSATEG00000009731	polr2j	100	97.436	Anabas_testudineus
ENSHCOG00000014827	polr2j	59	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSHCOG00000014827	polr2j	68	86.325	ENSACAG00000000251	POLR2J	100	86.325	Anolis_carolinensis
ENSHCOG00000014827	polr2j	68	97.436	ENSACLG00000014564	polr2j	100	97.436	Astatotilapia_calliptera
ENSHCOG00000014827	polr2j	68	98.291	ENSAMXG00000007517	polr2j	100	98.291	Astyanax_mexicanus
ENSHCOG00000014827	polr2j	64	67.273	WBGene00012187	rpb-11	89	67.273	Caenorhabditis_elegans
ENSHCOG00000014827	polr2j	68	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSHCOG00000014827	polr2j	68	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSHCOG00000014827	polr2j	58	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSHCOG00000014827	polr2j	68	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSHCOG00000014827	polr2j	68	73.504	ENSCATG00000016595	-	97	85.870	Cercocebus_atys
ENSHCOG00000014827	polr2j	68	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSHCOG00000014827	polr2j	68	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSHCOG00000014827	polr2j	68	81.197	ENSCING00000020531	-	100	81.197	Ciona_intestinalis
ENSHCOG00000014827	polr2j	68	81.197	ENSCSAVG00000006948	-	100	81.197	Ciona_savignyi
ENSHCOG00000014827	polr2j	68	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSHCOG00000014827	polr2j	68	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSHCOG00000014827	polr2j	68	94.872	ENSCSEG00000020352	polr2j	100	94.872	Cynoglossus_semilaevis
ENSHCOG00000014827	polr2j	68	96.581	ENSCVAG00000014267	polr2j	100	96.581	Cyprinodon_variegatus
ENSHCOG00000014827	polr2j	68	97.436	ENSDARG00000035146	polr2j	100	97.436	Danio_rerio
ENSHCOG00000014827	polr2j	68	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSHCOG00000014827	polr2j	67	78.261	FBgn0032634	Rpb11	98	78.261	Drosophila_melanogaster
ENSHCOG00000014827	polr2j	68	64.957	ENSEBUG00000016100	polr2j	100	64.957	Eptatretus_burgeri
ENSHCOG00000014827	polr2j	68	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSHCOG00000014827	polr2j	68	97.436	ENSELUG00000012822	polr2j	100	97.436	Esox_lucius
ENSHCOG00000014827	polr2j	68	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSHCOG00000014827	polr2j	68	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSHCOG00000014827	polr2j	68	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSHCOG00000014827	polr2j	68	97.436	ENSFHEG00000006625	polr2j	100	97.436	Fundulus_heteroclitus
ENSHCOG00000014827	polr2j	68	98.291	ENSGMOG00000018207	polr2j	100	98.291	Gadus_morhua
ENSHCOG00000014827	polr2j	68	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSHCOG00000014827	polr2j	68	97.436	ENSGAFG00000019555	polr2j	100	97.436	Gambusia_affinis
ENSHCOG00000014827	polr2j	68	97.436	ENSGACG00000003310	polr2j	100	97.436	Gasterosteus_aculeatus
ENSHCOG00000014827	polr2j	58	93.000	ENSGAGG00000018304	-	91	93.000	Gopherus_agassizii
ENSHCOG00000014827	polr2j	58	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSHCOG00000014827	polr2j	68	97.436	ENSHBUG00000008467	polr2j	100	97.436	Haplochromis_burtoni
ENSHCOG00000014827	polr2j	68	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSHCOG00000014827	polr2j	68	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSHCOG00000014827	polr2j	68	98.291	ENSIPUG00000023960	polr2j	100	98.291	Ictalurus_punctatus
ENSHCOG00000014827	polr2j	68	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSHCOG00000014827	polr2j	68	94.872	ENSJJAG00000013854	-	100	94.872	Jaculus_jaculus
ENSHCOG00000014827	polr2j	68	89.744	ENSJJAG00000018834	-	100	89.744	Jaculus_jaculus
ENSHCOG00000014827	polr2j	68	97.436	ENSKMAG00000014581	polr2j	79	97.436	Kryptolebias_marmoratus
ENSHCOG00000014827	polr2j	68	98.291	ENSLBEG00000005885	polr2j	100	98.291	Labrus_bergylta
ENSHCOG00000014827	polr2j	68	98.291	ENSLOCG00000001885	polr2j	89	98.291	Lepisosteus_oculatus
ENSHCOG00000014827	polr2j	68	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSHCOG00000014827	polr2j	68	85.385	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSHCOG00000014827	polr2j	68	98.291	ENSMAMG00000009374	polr2j	100	98.291	Mastacembelus_armatus
ENSHCOG00000014827	polr2j	68	97.436	ENSMZEG00005011932	polr2j	100	97.436	Maylandia_zebra
ENSHCOG00000014827	polr2j	68	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSHCOG00000014827	polr2j	68	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSHCOG00000014827	polr2j	55	89.362	ENSMICG00000026811	-	94	89.362	Microcebus_murinus
ENSHCOG00000014827	polr2j	68	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSHCOG00000014827	polr2j	68	97.436	ENSMMOG00000013265	polr2j	100	97.436	Mola_mola
ENSHCOG00000014827	polr2j	68	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSHCOG00000014827	polr2j	68	98.291	ENSMALG00000020749	polr2j	100	98.291	Monopterus_albus
ENSHCOG00000014827	polr2j	68	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSHCOG00000014827	polr2j	68	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSHCOG00000014827	polr2j	68	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSHCOG00000014827	polr2j	68	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSHCOG00000014827	polr2j	68	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSHCOG00000014827	polr2j	68	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSHCOG00000014827	polr2j	68	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSHCOG00000014827	polr2j	68	74.359	ENSODEG00000008559	-	100	74.359	Octodon_degus
ENSHCOG00000014827	polr2j	68	97.436	ENSONIG00000000259	polr2j	100	97.436	Oreochromis_niloticus
ENSHCOG00000014827	polr2j	68	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSHCOG00000014827	polr2j	68	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSHCOG00000014827	polr2j	68	97.436	ENSORLG00000029046	polr2j	83	97.436	Oryzias_latipes
ENSHCOG00000014827	polr2j	68	97.436	ENSORLG00020007625	polr2j	83	97.436	Oryzias_latipes_hni
ENSHCOG00000014827	polr2j	68	97.436	ENSORLG00015003457	polr2j	83	97.436	Oryzias_latipes_hsok
ENSHCOG00000014827	polr2j	68	96.581	ENSOMEG00000002097	polr2j	100	96.581	Oryzias_melastigma
ENSHCOG00000014827	polr2j	68	71.094	ENSOGAG00000008250	-	100	71.094	Otolemur_garnettii
ENSHCOG00000014827	polr2j	68	94.872	ENSOARG00000014204	-	98	94.872	Ovis_aries
ENSHCOG00000014827	polr2j	68	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSHCOG00000014827	polr2j	66	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSHCOG00000014827	polr2j	58	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSHCOG00000014827	polr2j	68	97.436	ENSPMGG00000021256	polr2j	100	97.436	Periophthalmus_magnuspinnatus
ENSHCOG00000014827	polr2j	68	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSHCOG00000014827	polr2j	68	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSHCOG00000014827	polr2j	68	97.436	ENSPFOG00000012001	polr2j	99	97.436	Poecilia_formosa
ENSHCOG00000014827	polr2j	68	97.436	ENSPLAG00000014075	polr2j	100	97.436	Poecilia_latipinna
ENSHCOG00000014827	polr2j	68	97.436	ENSPMEG00000020585	polr2j	100	97.436	Poecilia_mexicana
ENSHCOG00000014827	polr2j	68	97.436	ENSPREG00000015255	polr2j	100	97.436	Poecilia_reticulata
ENSHCOG00000014827	polr2j	68	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSHCOG00000014827	polr2j	67	88.793	ENSPVAG00000017770	-	66	88.793	Pteropus_vampyrus
ENSHCOG00000014827	polr2j	68	97.436	ENSPNYG00000014832	polr2j	100	97.436	Pundamilia_nyererei
ENSHCOG00000014827	polr2j	68	95.726	ENSPNAG00000016595	polr2j	100	95.726	Pygocentrus_nattereri
ENSHCOG00000014827	polr2j	68	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSHCOG00000014827	polr2j	68	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSHCOG00000014827	polr2j	63	95.413	ENSSFOG00015003371	polr2j	83	95.413	Scleropages_formosus
ENSHCOG00000014827	polr2j	68	97.436	ENSSMAG00000006729	polr2j	100	97.436	Scophthalmus_maximus
ENSHCOG00000014827	polr2j	68	97.436	ENSSDUG00000018490	polr2j	100	97.436	Seriola_dumerili
ENSHCOG00000014827	polr2j	68	97.436	ENSSLDG00000022354	polr2j	100	97.436	Seriola_lalandi_dorsalis
ENSHCOG00000014827	polr2j	68	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSHCOG00000014827	polr2j	68	97.436	ENSSPAG00000021953	polr2j	100	97.436	Stegastes_partitus
ENSHCOG00000014827	polr2j	68	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSHCOG00000014827	polr2j	76	72.519	ENSSSCG00000003703	-	84	77.311	Sus_scrofa
ENSHCOG00000014827	polr2j	58	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSHCOG00000014827	polr2j	68	97.436	ENSTRUG00000020842	polr2j	100	97.436	Takifugu_rubripes
ENSHCOG00000014827	polr2j	68	96.581	ENSTNIG00000002994	polr2j	100	96.581	Tetraodon_nigroviridis
ENSHCOG00000014827	polr2j	74	70.312	ENSTBEG00000005797	-	70	80.374	Tupaia_belangeri
ENSHCOG00000014827	polr2j	68	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSHCOG00000014827	polr2j	68	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSHCOG00000014827	polr2j	68	94.872	ENSXETG00000001108	polr2j	100	94.872	Xenopus_tropicalis
ENSHCOG00000014827	polr2j	68	97.436	ENSXMAG00000012422	polr2j	100	97.436	Xiphophorus_maculatus