EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Description

Ensembl ID: ENSHCOG00000014886 (Gene tree)
Gene ID: 109507025
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 36337 bases
Position: chrKV880472.1:1248420-1284756
Accession: 109507025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000011950	RRM_1	PF00076.22	5.6e-08	1	1
ENSHCOP00000011947	RRM_1	PF00076.22	5.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018837	-	6037	XM_019856141	ENSHCOP00000011947	915 (aa)	XP_019711700	UPI00094F1776
ENSHCOT00000026752	-	5624	XM_019856142	ENSHCOP00000011950	914 (aa)	XP_019711701	UPI00094F199A

Gene Model

Click here to download ENSHCOG00000014886's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04371	Apelin signaling pathway	KEGG
hcq04910	Insulin signaling pathway	KEGG
hcq04920	Adipocytokine signaling pathway	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014886	ppargc1a	91	79.878	ENSG00000109819	PPARGC1A	79	80.769	Homo_sapiens
ENSHCOG00000014886	ppargc1a	93	93.952	ENSAPOG00000018632	ppargc1a	99	93.469	Acanthochromis_polyacanthus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSAMEG00000010421	PPARGC1A	93	57.802	Ailuropoda_melanoleuca
ENSHCOG00000014886	ppargc1a	92	90.683	ENSACIG00000009732	ppargc1a	99	91.498	Amphilophus_citrinellus
ENSHCOG00000014886	ppargc1a	93	93.952	ENSAOCG00000006754	ppargc1a	99	93.469	Amphiprion_ocellaris
ENSHCOG00000014886	ppargc1a	93	91.903	ENSATEG00000016702	ppargc1a	99	91.903	Anabas_testudineus
ENSHCOG00000014886	ppargc1a	91	79.394	ENSAPLG00000005303	PPARGC1A	87	73.516	Anas_platyrhynchos
ENSHCOG00000014886	ppargc1a	100	51.180	ENSACAG00000000741	PPARGC1A	76	77.273	Anolis_carolinensis
ENSHCOG00000014886	ppargc1a	91	79.878	ENSANAG00000035930	PPARGC1A	100	51.840	Aotus_nancymaae
ENSHCOG00000014886	ppargc1a	98	88.148	ENSACLG00000001002	ppargc1a	96	93.117	Astatotilapia_calliptera
ENSHCOG00000014886	ppargc1a	93	93.421	ENSAMXG00000002461	ppargc1a	99	93.421	Astyanax_mexicanus
ENSHCOG00000014886	ppargc1a	91	78.788	ENSBTAG00000017024	PPARGC1A	100	51.290	Bos_taurus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSCJAG00000013024	PPARGC1A	100	51.840	Callithrix_jacchus
ENSHCOG00000014886	ppargc1a	100	51.395	ENSCAFG00000016519	PPARGC1A	93	58.022	Canis_familiaris
ENSHCOG00000014886	ppargc1a	97	50.551	ENSCAFG00020027242	PPARGC1A	93	56.684	Canis_lupus_dingo
ENSHCOG00000014886	ppargc1a	100	51.509	ENSCHIG00000015991	PPARGC1A	94	72.770	Capra_hircus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSTSYG00000010439	PPARGC1A	93	73.892	Carlito_syrichta
ENSHCOG00000014886	ppargc1a	86	79.268	ENSCAPG00000005150	PPARGC1A	87	71.354	Cavia_aperea
ENSHCOG00000014886	ppargc1a	89	79.268	ENSCPOG00000001518	PPARGC1A	100	52.061	Cavia_porcellus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSCCAG00000024681	PPARGC1A	93	57.112	Cebus_capucinus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSCATG00000032575	PPARGC1A	93	57.112	Cercocebus_atys
ENSHCOG00000014886	ppargc1a	91	78.659	ENSCLAG00000002058	PPARGC1A	100	52.221	Chinchilla_lanigera
ENSHCOG00000014886	ppargc1a	91	79.878	ENSCSAG00000016575	PPARGC1A	93	57.112	Chlorocebus_sabaeus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSCANG00000033426	PPARGC1A	100	51.840	Colobus_angolensis_palliatus
ENSHCOG00000014886	ppargc1a	91	77.439	ENSCGRG00001015534	Ppargc1a	96	57.549	Cricetulus_griseus_chok1gshd
ENSHCOG00000014886	ppargc1a	91	77.439	ENSCGRG00000000200	Ppargc1a	96	57.549	Cricetulus_griseus_crigri
ENSHCOG00000014886	ppargc1a	93	92.742	ENSCSEG00000006884	ppargc1a	97	95.279	Cynoglossus_semilaevis
ENSHCOG00000014886	ppargc1a	100	64.084	ENSCVAG00000016547	ppargc1a	100	64.286	Cyprinodon_variegatus
ENSHCOG00000014886	ppargc1a	100	51.620	ENSDNOG00000041106	PPARGC1A	93	57.363	Dasypus_novemcinctus
ENSHCOG00000014886	ppargc1a	90	78.659	ENSDORG00000016276	Ppargc1a	98	52.093	Dipodomys_ordii
ENSHCOG00000014886	ppargc1a	100	51.609	ENSEASG00005007984	PPARGC1A	100	52.711	Equus_asinus_asinus
ENSHCOG00000014886	ppargc1a	99	50.974	ENSECAG00000009164	PPARGC1A	98	52.079	Equus_caballus
ENSHCOG00000014886	ppargc1a	98	52.260	ENSEEUG00000009219	PPARGC1A	100	51.758	Erinaceus_europaeus
ENSHCOG00000014886	ppargc1a	92	88.085	ENSELUG00000017027	ppargc1a	100	62.500	Esox_lucius
ENSHCOG00000014886	ppargc1a	100	52.268	ENSFCAG00000000043	PPARGC1A	95	57.802	Felis_catus
ENSHCOG00000014886	ppargc1a	99	51.087	ENSFALG00000009211	PPARGC1A	94	73.333	Ficedula_albicollis
ENSHCOG00000014886	ppargc1a	91	77.439	ENSFDAG00000005659	PPARGC1A	100	50.913	Fukomys_damarensis
ENSHCOG00000014886	ppargc1a	92	91.701	ENSFHEG00000021990	ppargc1a	98	91.020	Fundulus_heteroclitus
ENSHCOG00000014886	ppargc1a	91	79.394	ENSGALG00000042851	PPARGC1A	87	73.973	Gallus_gallus
ENSHCOG00000014886	ppargc1a	95	90.871	ENSGAFG00000015514	ppargc1a	99	90.204	Gambusia_affinis
ENSHCOG00000014886	ppargc1a	99	51.310	ENSGAGG00000007043	PPARGC1A	62	53.472	Gopherus_agassizii
ENSHCOG00000014886	ppargc1a	91	79.878	ENSGGOG00000009810	PPARGC1A	100	51.948	Gorilla_gorilla
ENSHCOG00000014886	ppargc1a	99	88.772	ENSHBUG00000005269	ppargc1a	99	96.721	Haplochromis_burtoni
ENSHCOG00000014886	ppargc1a	90	77.439	ENSHGLG00000007022	PPARGC1A	100	49.134	Heterocephalus_glaber_female
ENSHCOG00000014886	ppargc1a	91	77.439	ENSHGLG00100000133	PPARGC1A	100	49.362	Heterocephalus_glaber_male
ENSHCOG00000014886	ppargc1a	92	85.470	ENSIPUG00000020313	ppargc1a	69	85.470	Ictalurus_punctatus
ENSHCOG00000014886	ppargc1a	91	78.659	ENSSTOG00000012522	PPARGC1A	100	51.844	Ictidomys_tridecemlineatus
ENSHCOG00000014886	ppargc1a	100	73.130	ENSKMAG00000005390	ppargc1a	94	93.860	Kryptolebias_marmoratus
ENSHCOG00000014886	ppargc1a	92	92.946	ENSLBEG00000019562	ppargc1a	99	92.245	Labrus_bergylta
ENSHCOG00000014886	ppargc1a	89	83.140	ENSLACG00000014054	PPARGC1A	94	75.122	Latimeria_chalumnae
ENSHCOG00000014886	ppargc1a	91	84.103	ENSLOCG00000012350	ppargc1a	100	60.108	Lepisosteus_oculatus
ENSHCOG00000014886	ppargc1a	100	51.029	ENSLAFG00000012981	PPARGC1A	94	73.516	Loxodonta_africana
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMFAG00000000534	PPARGC1A	93	57.768	Macaca_fascicularis
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMMUG00000001844	PPARGC1A	93	57.768	Macaca_mulatta
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMNEG00000028682	PPARGC1A	93	57.768	Macaca_nemestrina
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMLEG00000034233	PPARGC1A	93	57.112	Mandrillus_leucophaeus
ENSHCOG00000014886	ppargc1a	100	79.158	ENSMAMG00000005531	ppargc1a	100	78.398	Mastacembelus_armatus
ENSHCOG00000014886	ppargc1a	99	88.421	ENSMZEG00005001739	ppargc1a	69	93.117	Maylandia_zebra
ENSHCOG00000014886	ppargc1a	91	80.000	ENSMGAG00000012485	PPARGC1A	71	72.986	Meleagris_gallopavo
ENSHCOG00000014886	ppargc1a	91	78.049	ENSMAUG00000011811	Ppargc1a	96	57.549	Mesocricetus_auratus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMICG00000015390	PPARGC1A	71	72.851	Microcebus_murinus
ENSHCOG00000014886	ppargc1a	91	78.049	ENSMOCG00000008765	Ppargc1a	93	57.549	Microtus_ochrogaster
ENSHCOG00000014886	ppargc1a	100	68.995	ENSMMOG00000011847	ppargc1a	99	91.515	Mola_mola
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMODG00000000549	PPARGC1A	88	75.799	Monodelphis_domestica
ENSHCOG00000014886	ppargc1a	93	92.339	ENSMALG00000004625	ppargc1a	92	88.028	Monopterus_albus
ENSHCOG00000014886	ppargc1a	91	76.220	MGP_CAROLIEiJ_G0027213	Ppargc1a	96	56.674	Mus_caroli
ENSHCOG00000014886	ppargc1a	91	76.220	ENSMUSG00000029167	Ppargc1a	96	57.112	Mus_musculus
ENSHCOG00000014886	ppargc1a	91	76.220	MGP_PahariEiJ_G0016995	Ppargc1a	96	56.455	Mus_pahari
ENSHCOG00000014886	ppargc1a	91	75.610	MGP_SPRETEiJ_G0028208	Ppargc1a	96	57.112	Mus_spretus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSMPUG00000016736	PPARGC1A	100	52.495	Mustela_putorius_furo
ENSHCOG00000014886	ppargc1a	100	51.568	ENSMLUG00000016307	PPARGC1A	100	50.913	Myotis_lucifugus
ENSHCOG00000014886	ppargc1a	91	78.659	ENSNGAG00000015090	Ppargc1a	94	72.146	Nannospalax_galili
ENSHCOG00000014886	ppargc1a	100	66.918	ENSNBRG00000023403	ppargc1a	96	93.117	Neolamprologus_brichardi
ENSHCOG00000014886	ppargc1a	78	79.878	ENSNLEG00000016760	PPARGC1A	100	49.573	Nomascus_leucogenys
ENSHCOG00000014886	ppargc1a	91	78.659	ENSOPRG00000012899	PPARGC1A	100	51.302	Ochotona_princeps
ENSHCOG00000014886	ppargc1a	100	69.762	ENSONIG00000007635	ppargc1a	100	70.518	Oreochromis_niloticus
ENSHCOG00000014886	ppargc1a	89	58.444	ENSOANG00000006680	PPARGC1A	87	76.712	Ornithorhynchus_anatinus
ENSHCOG00000014886	ppargc1a	91	79.268	ENSOCUG00000014668	PPARGC1A	100	51.571	Oryctolagus_cuniculus
ENSHCOG00000014886	ppargc1a	99	83.775	ENSORLG00000004788	ppargc1a	99	91.429	Oryzias_latipes
ENSHCOG00000014886	ppargc1a	99	85.099	ENSORLG00020014690	ppargc1a	72	87.986	Oryzias_latipes_hni
ENSHCOG00000014886	ppargc1a	99	84.768	ENSORLG00015012206	ppargc1a	99	93.421	Oryzias_latipes_hsok
ENSHCOG00000014886	ppargc1a	93	89.759	ENSOMEG00000000670	ppargc1a	99	91.093	Oryzias_melastigma
ENSHCOG00000014886	ppargc1a	100	50.541	ENSOGAG00000014559	PPARGC1A	93	57.330	Otolemur_garnettii
ENSHCOG00000014886	ppargc1a	100	50.868	ENSOARG00000005581	PPARGC1A	97	51.235	Ovis_aries
ENSHCOG00000014886	ppargc1a	91	79.878	ENSPPAG00000034694	PPARGC1A	100	51.840	Pan_paniscus
ENSHCOG00000014886	ppargc1a	100	52.268	ENSPPRG00000001711	PPARGC1A	93	57.802	Panthera_pardus
ENSHCOG00000014886	ppargc1a	100	52.268	ENSPTIG00000007378	PPARGC1A	93	57.802	Panthera_tigris_altaica
ENSHCOG00000014886	ppargc1a	91	79.878	ENSPTRG00000015954	PPARGC1A	100	51.948	Pan_troglodytes
ENSHCOG00000014886	ppargc1a	91	79.878	ENSPANG00000005420	PPARGC1A	93	56.417	Papio_anubis
ENSHCOG00000014886	ppargc1a	65	51.825	ENSPSIG00000008358	PPARGC1B	52	50.725	Pelodiscus_sinensis
ENSHCOG00000014886	ppargc1a	93	78.977	ENSPSIG00000011790	PPARGC1A	67	44.057	Pelodiscus_sinensis
ENSHCOG00000014886	ppargc1a	100	67.164	ENSPMGG00000019204	ppargc1a	100	68.056	Periophthalmus_magnuspinnatus
ENSHCOG00000014886	ppargc1a	91	77.576	ENSPEMG00000010892	Ppargc1a	96	57.549	Peromyscus_maniculatus_bairdii
ENSHCOG00000014886	ppargc1a	100	52.928	ENSPCIG00000015835	PPARGC1A	94	75.799	Phascolarctos_cinereus
ENSHCOG00000014886	ppargc1a	100	72.479	ENSPFOG00000001263	ppargc1a	100	72.766	Poecilia_formosa
ENSHCOG00000014886	ppargc1a	81	91.803	ENSPLAG00000002827	ppargc1a	97	91.803	Poecilia_latipinna
ENSHCOG00000014886	ppargc1a	94	91.667	ENSPMEG00000000720	ppargc1a	100	70.563	Poecilia_mexicana
ENSHCOG00000014886	ppargc1a	95	92.116	ENSPREG00000019171	ppargc1a	95	91.429	Poecilia_reticulata
ENSHCOG00000014886	ppargc1a	91	79.878	ENSPPYG00000014640	PPARGC1A	100	51.948	Pongo_abelii
ENSHCOG00000014886	ppargc1a	100	50.325	ENSPCAG00000016308	PPARGC1A	87	73.853	Procavia_capensis
ENSHCOG00000014886	ppargc1a	91	80.000	ENSPCOG00000022858	PPARGC1A	93	57.549	Propithecus_coquereli
ENSHCOG00000014886	ppargc1a	91	78.659	ENSPVAG00000004965	PPARGC1A	100	52.061	Pteropus_vampyrus
ENSHCOG00000014886	ppargc1a	99	88.772	ENSPNYG00000006846	ppargc1a	99	93.117	Pundamilia_nyererei
ENSHCOG00000014886	ppargc1a	93	93.421	ENSPNAG00000010393	ppargc1a	99	93.421	Pygocentrus_nattereri
ENSHCOG00000014886	ppargc1a	91	76.829	ENSRNOG00000004473	Ppargc1a	96	57.112	Rattus_norvegicus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSRBIG00000032333	PPARGC1A	100	51.840	Rhinopithecus_bieti
ENSHCOG00000014886	ppargc1a	91	79.878	ENSRROG00000010419	PPARGC1A	100	51.840	Rhinopithecus_roxellana
ENSHCOG00000014886	ppargc1a	91	79.878	ENSSBOG00000006423	PPARGC1A	100	51.948	Saimiri_boliviensis_boliviensis
ENSHCOG00000014886	ppargc1a	100	52.763	ENSSHAG00000010033	PPARGC1A	85	75.799	Sarcophilus_harrisii
ENSHCOG00000014886	ppargc1a	66	46.217	ENSSFOG00015018522	ppargc1a	52	61.039	Scleropages_formosus
ENSHCOG00000014886	ppargc1a	94	74.894	ENSSFOG00015001633	ppargc1a	83	74.894	Scleropages_formosus
ENSHCOG00000014886	ppargc1a	95	91.532	ENSSMAG00000011571	ppargc1a	87	91.498	Scophthalmus_maximus
ENSHCOG00000014886	ppargc1a	100	69.346	ENSSDUG00000007408	ppargc1a	97	94.850	Seriola_dumerili
ENSHCOG00000014886	ppargc1a	100	75.026	ENSSLDG00000006987	ppargc1a	100	74.921	Seriola_lalandi_dorsalis
ENSHCOG00000014886	ppargc1a	87	79.032	ENSSARG00000000575	PPARGC1A	93	55.385	Sorex_araneus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSSPUG00000013556	PPARGC1A	66	80.114	Sphenodon_punctatus
ENSHCOG00000014886	ppargc1a	91	93.562	ENSSPAG00000023514	ppargc1a	99	93.469	Stegastes_partitus
ENSHCOG00000014886	ppargc1a	91	79.878	ENSSSCG00000029275	PPARGC1A	100	52.113	Sus_scrofa
ENSHCOG00000014886	ppargc1a	100	51.453	ENSTGUG00000009487	PPARGC1A	95	73.333	Taeniopygia_guttata
ENSHCOG00000014886	ppargc1a	92	68.548	ENSTRUG00000007210	ppargc1a	92	69.781	Takifugu_rubripes
ENSHCOG00000014886	ppargc1a	91	56.923	ENSTTRG00000005327	PPARGC1A	87	72.683	Tursiops_truncatus
ENSHCOG00000014886	ppargc1a	86	79.141	ENSUAMG00000020843	PPARGC1A	92	56.417	Ursus_americanus
ENSHCOG00000014886	ppargc1a	90	79.878	ENSUMAG00000003557	PPARGC1A	92	57.631	Ursus_maritimus
ENSHCOG00000014886	ppargc1a	83	79.394	ENSVPAG00000003478	PPARGC1A	52	72.772	Vicugna_pacos
ENSHCOG00000014886	ppargc1a	100	51.395	ENSVVUG00000013365	PPARGC1A	93	58.022	Vulpes_vulpes
ENSHCOG00000014886	ppargc1a	100	50.490	ENSXETG00000020468	ppargc1a	67	43.851	Xenopus_tropicalis
ENSHCOG00000014886	ppargc1a	100	69.885	ENSXCOG00000004835	ppargc1a	100	68.482	Xiphophorus_couchianus
ENSHCOG00000014886	ppargc1a	94	91.250	ENSXMAG00000007748	ppargc1a	72	86.620	Xiphophorus_maculatus