EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000014952 (Gene tree)
Gene ID: 109518033
Gene Symbol: rbm12b
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA-binding protein 12B-A-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1824 bases
Position: chrKV880018.1:244799-246622
Accession: 109518033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012007	RRM_1	PF00076.22	1.6e-33	1	3
ENSHCOP00000012007	RRM_1	PF00076.22	1.6e-33	2	3
ENSHCOP00000012007	RRM_1	PF00076.22	1.6e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000018916	-	1824	XM_019873631	ENSHCOP00000012007	607 (aa)	XP_019729190	UPI00094E408A

Gene Model

Click here to download ENSHCOG00000014952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000014952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000014952	rbm12b	56	30.415	ENSHCOG00000007715	-	52	30.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000014952	rbm12b	100	49.351	ENSG00000183808	RBM12B	98	75.000	Homo_sapiens
ENSHCOG00000014952	rbm12b	100	55.573	ENSAPOG00000013963	rbm12b	100	55.573	Acanthochromis_polyacanthus
ENSHCOG00000014952	rbm12b	90	48.052	ENSAMEG00000007134	RBM12B	66	48.052	Ailuropoda_melanoleuca
ENSHCOG00000014952	rbm12b	98	54.412	ENSACIG00000014943	rbm12b	99	58.900	Amphilophus_citrinellus
ENSHCOG00000014952	rbm12b	100	55.189	ENSAOCG00000024270	rbm12b	100	55.031	Amphiprion_ocellaris
ENSHCOG00000014952	rbm12b	98	58.704	ENSAPEG00000022079	rbm12b	99	56.958	Amphiprion_percula
ENSHCOG00000014952	rbm12b	97	48.750	ENSATEG00000001886	zgc:153215	75	48.750	Anabas_testudineus
ENSHCOG00000014952	rbm12b	100	53.155	ENSATEG00000004578	rbm12b	97	53.155	Anabas_testudineus
ENSHCOG00000014952	rbm12b	100	35.227	ENSAPLG00000002020	RBM12B	100	35.887	Anas_platyrhynchos
ENSHCOG00000014952	rbm12b	94	46.753	ENSACAG00000003463	RBM12B	60	46.753	Anolis_carolinensis
ENSHCOG00000014952	rbm12b	90	49.351	ENSANAG00000034015	RBM12B	67	49.351	Aotus_nancymaae
ENSHCOG00000014952	rbm12b	100	55.799	ENSACLG00000005575	rbm12b	98	55.799	Astatotilapia_calliptera
ENSHCOG00000014952	rbm12b	100	44.730	ENSACLG00000005578	rbm12b	100	44.730	Astatotilapia_calliptera
ENSHCOG00000014952	rbm12b	78	54.762	ENSAMXG00000020853	zgc:153215	76	46.364	Astyanax_mexicanus
ENSHCOG00000014952	rbm12b	100	43.730	ENSAMXG00000041973	rbm12b	100	44.601	Astyanax_mexicanus
ENSHCOG00000014952	rbm12b	90	49.351	ENSBTAG00000013408	RBM12B	65	49.351	Bos_taurus
ENSHCOG00000014952	rbm12b	90	48.052	ENSCAFG00000009109	RBM12B	56	48.052	Canis_familiaris
ENSHCOG00000014952	rbm12b	90	48.052	ENSCAFG00020012203	RBM12B	64	48.052	Canis_lupus_dingo
ENSHCOG00000014952	rbm12b	77	37.449	ENSCHIG00000006790	RBM12B	67	37.449	Capra_hircus
ENSHCOG00000014952	rbm12b	90	49.351	ENSTSYG00000012515	RBM12B	57	49.351	Carlito_syrichta
ENSHCOG00000014952	rbm12b	97	41.667	ENSCAPG00000003543	RBM12B	64	41.667	Cavia_aperea
ENSHCOG00000014952	rbm12b	97	41.667	ENSCPOG00000007815	RBM12B	64	41.667	Cavia_porcellus
ENSHCOG00000014952	rbm12b	100	49.351	ENSCATG00000030769	RBM12B	65	49.351	Cercocebus_atys
ENSHCOG00000014952	rbm12b	97	41.353	ENSCLAG00000017617	RBM12B	64	41.353	Chinchilla_lanigera
ENSHCOG00000014952	rbm12b	90	49.351	ENSCSAG00000018559	RBM12B	56	49.351	Chlorocebus_sabaeus
ENSHCOG00000014952	rbm12b	87	46.032	ENSCHOG00000008934	RBM12B	58	46.032	Choloepus_hoffmanni
ENSHCOG00000014952	rbm12b	100	35.252	ENSCPBG00000003061	RBM12B	100	35.252	Chrysemys_picta_bellii
ENSHCOG00000014952	rbm12b	100	49.351	ENSCANG00000030379	RBM12B	65	49.351	Colobus_angolensis_palliatus
ENSHCOG00000014952	rbm12b	97	40.000	ENSCGRG00001008710	-	70	40.000	Cricetulus_griseus_chok1gshd
ENSHCOG00000014952	rbm12b	100	51.220	ENSCSEG00000004610	rbm12b	97	51.220	Cynoglossus_semilaevis
ENSHCOG00000014952	rbm12b	100	50.935	ENSCVAG00000011047	rbm12b	100	51.097	Cyprinodon_variegatus
ENSHCOG00000014952	rbm12b	100	61.053	ENSDARG00000079717	rbm12b	83	61.053	Danio_rerio
ENSHCOG00000014952	rbm12b	90	49.351	ENSDNOG00000041608	RBM12B	56	49.351	Dasypus_novemcinctus
ENSHCOG00000014952	rbm12b	92	47.573	ENSDORG00000024034	-	63	47.573	Dipodomys_ordii
ENSHCOG00000014952	rbm12b	100	36.853	ENSETEG00000013005	-	65	36.853	Echinops_telfairi
ENSHCOG00000014952	rbm12b	90	50.649	ENSEASG00005016297	RBM12B	64	50.649	Equus_asinus_asinus
ENSHCOG00000014952	rbm12b	90	50.649	ENSECAG00000017870	RBM12B	57	50.649	Equus_caballus
ENSHCOG00000014952	rbm12b	90	50.649	ENSFCAG00000029274	RBM12B	65	50.649	Felis_catus
ENSHCOG00000014952	rbm12b	100	34.278	ENSFALG00000014893	RBM12B	100	34.278	Ficedula_albicollis
ENSHCOG00000014952	rbm12b	100	40.764	ENSFDAG00000005576	RBM12B	66	40.764	Fukomys_damarensis
ENSHCOG00000014952	rbm12b	100	50.234	ENSFHEG00000016425	rbm12b	100	50.234	Fundulus_heteroclitus
ENSHCOG00000014952	rbm12b	99	50.475	ENSGMOG00000013467	rbm12b	100	50.475	Gadus_morhua
ENSHCOG00000014952	rbm12b	100	35.211	ENSGALG00000035129	RBM12B	100	35.211	Gallus_gallus
ENSHCOG00000014952	rbm12b	100	52.508	ENSGAFG00000007224	rbm12b	100	52.508	Gambusia_affinis
ENSHCOG00000014952	rbm12b	100	54.050	ENSGACG00000008682	rbm12b	99	54.050	Gasterosteus_aculeatus
ENSHCOG00000014952	rbm12b	100	34.438	ENSGAGG00000009774	RBM12B	100	34.438	Gopherus_agassizii
ENSHCOG00000014952	rbm12b	100	37.832	ENSGGOG00000011909	RBM12B	73	37.832	Gorilla_gorilla
ENSHCOG00000014952	rbm12b	100	53.729	ENSHBUG00000016227	rbm12b	100	53.729	Haplochromis_burtoni
ENSHCOG00000014952	rbm12b	97	43.077	ENSHGLG00000009063	RBM12B	63	43.077	Heterocephalus_glaber_female
ENSHCOG00000014952	rbm12b	97	43.077	ENSHGLG00100021324	RBM12B	63	43.077	Heterocephalus_glaber_male
ENSHCOG00000014952	rbm12b	77	57.500	ENSIPUG00000019731	zgc:153215	76	57.500	Ictalurus_punctatus
ENSHCOG00000014952	rbm12b	100	43.143	ENSIPUG00000001167	RBM12B	97	43.143	Ictalurus_punctatus
ENSHCOG00000014952	rbm12b	100	36.327	ENSSTOG00000027445	RBM12B	77	36.327	Ictidomys_tridecemlineatus
ENSHCOG00000014952	rbm12b	100	44.660	ENSJJAG00000004165	-	67	44.660	Jaculus_jaculus
ENSHCOG00000014952	rbm12b	99	50.392	ENSKMAG00000013715	rbm12b	99	50.470	Kryptolebias_marmoratus
ENSHCOG00000014952	rbm12b	99	49.922	ENSKMAG00000013704	rbm12b	96	50.000	Kryptolebias_marmoratus
ENSHCOG00000014952	rbm12b	100	37.946	ENSLACG00000007177	RBM12B	100	38.594	Latimeria_chalumnae
ENSHCOG00000014952	rbm12b	100	43.328	ENSLOCG00000018344	rbm12b	100	43.713	Lepisosteus_oculatus
ENSHCOG00000014952	rbm12b	100	48.052	ENSLAFG00000029949	RBM12B	66	48.052	Loxodonta_africana
ENSHCOG00000014952	rbm12b	100	49.351	ENSMFAG00000045430	RBM12B	65	49.351	Macaca_fascicularis
ENSHCOG00000014952	rbm12b	100	49.351	ENSMMUG00000005558	RBM12B	64	49.351	Macaca_mulatta
ENSHCOG00000014952	rbm12b	100	49.351	ENSMNEG00000041292	RBM12B	65	49.351	Macaca_nemestrina
ENSHCOG00000014952	rbm12b	100	49.351	ENSMLEG00000037288	RBM12B	63	49.351	Mandrillus_leucophaeus
ENSHCOG00000014952	rbm12b	99	31.818	ENSMAMG00000012038	zgc:153215	99	31.818	Mastacembelus_armatus
ENSHCOG00000014952	rbm12b	100	56.986	ENSMAMG00000011998	rbm12b	100	57.300	Mastacembelus_armatus
ENSHCOG00000014952	rbm12b	100	55.643	ENSMZEG00005015005	rbm12b	100	55.643	Maylandia_zebra
ENSHCOG00000014952	rbm12b	100	53.448	ENSMZEG00005014845	rbm12b	99	53.228	Maylandia_zebra
ENSHCOG00000014952	rbm12b	97	37.500	ENSMGAG00000011985	RBM12B	99	37.500	Meleagris_gallopavo
ENSHCOG00000014952	rbm12b	90	48.052	ENSMAUG00000021752	-	67	48.052	Mesocricetus_auratus
ENSHCOG00000014952	rbm12b	100	37.143	ENSMICG00000036969	RBM12B	76	37.143	Microcebus_murinus
ENSHCOG00000014952	rbm12b	90	50.649	ENSMOCG00000005603	-	67	50.649	Microtus_ochrogaster
ENSHCOG00000014952	rbm12b	57	33.621	ENSMMOG00000003372	zgc:153215	95	33.621	Mola_mola
ENSHCOG00000014952	rbm12b	99	54.032	ENSMMOG00000002404	rbm12b	94	54.032	Mola_mola
ENSHCOG00000014952	rbm12b	100	40.152	ENSMODG00000007436	RBM12B	84	40.152	Monodelphis_domestica
ENSHCOG00000014952	rbm12b	100	53.966	ENSMALG00000012059	rbm12b	100	53.966	Monopterus_albus
ENSHCOG00000014952	rbm12b	77	30.247	ENSMALG00000001222	zgc:153215	99	30.247	Monopterus_albus
ENSHCOG00000014952	rbm12b	89	49.333	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSHCOG00000014952	rbm12b	89	52.000	ENSMUSG00000046667	Rbm12b1	67	52.000	Mus_musculus
ENSHCOG00000014952	rbm12b	89	49.333	MGP_SPRETEiJ_G0026765	-	61	49.333	Mus_spretus
ENSHCOG00000014952	rbm12b	89	49.333	MGP_SPRETEiJ_G0026766	-	67	49.333	Mus_spretus
ENSHCOG00000014952	rbm12b	90	49.351	ENSMPUG00000018637	RBM12B	56	49.351	Mustela_putorius_furo
ENSHCOG00000014952	rbm12b	90	48.052	ENSMLUG00000002359	RBM12B	59	48.052	Myotis_lucifugus
ENSHCOG00000014952	rbm12b	90	50.649	ENSNGAG00000002801	-	61	50.649	Nannospalax_galili
ENSHCOG00000014952	rbm12b	100	55.486	ENSNBRG00000015057	rbm12b	100	55.486	Neolamprologus_brichardi
ENSHCOG00000014952	rbm12b	100	49.351	ENSNLEG00000032050	RBM12B	63	49.351	Nomascus_leucogenys
ENSHCOG00000014952	rbm12b	97	41.353	ENSODEG00000019204	RBM12B	65	41.353	Octodon_degus
ENSHCOG00000014952	rbm12b	100	56.113	ENSONIG00000020612	rbm12b	100	56.113	Oreochromis_niloticus
ENSHCOG00000014952	rbm12b	100	34.714	ENSOANG00000015735	-	97	35.653	Ornithorhynchus_anatinus
ENSHCOG00000014952	rbm12b	97	41.538	ENSOCUG00000010353	RBM12B	70	41.538	Oryctolagus_cuniculus
ENSHCOG00000014952	rbm12b	100	50.390	ENSORLG00000008228	rbm12b	97	50.390	Oryzias_latipes
ENSHCOG00000014952	rbm12b	100	50.390	ENSORLG00020013619	rbm12b	97	50.390	Oryzias_latipes_hni
ENSHCOG00000014952	rbm12b	100	50.390	ENSORLG00015019999	rbm12b	97	50.390	Oryzias_latipes_hsok
ENSHCOG00000014952	rbm12b	100	52.106	ENSOMEG00000022523	rbm12b	97	52.106	Oryzias_melastigma
ENSHCOG00000014952	rbm12b	90	49.351	ENSOGAG00000002979	RBM12B	57	49.351	Otolemur_garnettii
ENSHCOG00000014952	rbm12b	90	50.649	ENSPTIG00000020071	RBM12B	65	50.649	Panthera_tigris_altaica
ENSHCOG00000014952	rbm12b	100	49.351	ENSPTRG00000020420	RBM12B	64	49.351	Pan_troglodytes
ENSHCOG00000014952	rbm12b	100	49.351	ENSPANG00000035535	RBM12B	63	49.351	Papio_anubis
ENSHCOG00000014952	rbm12b	77	31.141	ENSPKIG00000014851	zgc:153215	99	31.141	Paramormyrops_kingsleyae
ENSHCOG00000014952	rbm12b	100	46.073	ENSPKIG00000018719	rbm12b	99	46.073	Paramormyrops_kingsleyae
ENSHCOG00000014952	rbm12b	100	35.007	ENSPSIG00000001348	RBM12B	100	35.007	Pelodiscus_sinensis
ENSHCOG00000014952	rbm12b	52	46.605	ENSPMGG00000012348	-	97	46.605	Periophthalmus_magnuspinnatus
ENSHCOG00000014952	rbm12b	90	49.351	ENSPEMG00000008279	-	67	49.351	Peromyscus_maniculatus_bairdii
ENSHCOG00000014952	rbm12b	97	40.152	ENSPCIG00000008556	RBM12B	84	40.159	Phascolarctos_cinereus
ENSHCOG00000014952	rbm12b	100	51.962	ENSPFOG00000020937	rbm12b	97	51.962	Poecilia_formosa
ENSHCOG00000014952	rbm12b	73	37.600	ENSPFOG00000017451	zgc:153215	72	37.600	Poecilia_formosa
ENSHCOG00000014952	rbm12b	100	52.978	ENSPLAG00000018782	rbm12b	100	52.978	Poecilia_latipinna
ENSHCOG00000014952	rbm12b	100	52.978	ENSPMEG00000011418	rbm12b	100	52.978	Poecilia_mexicana
ENSHCOG00000014952	rbm12b	100	52.508	ENSPREG00000020770	rbm12b	100	52.508	Poecilia_reticulata
ENSHCOG00000014952	rbm12b	90	49.351	ENSPPYG00000018745	RBM12B	56	49.351	Pongo_abelii
ENSHCOG00000014952	rbm12b	100	36.939	ENSPCOG00000023546	RBM12B	74	36.939	Propithecus_coquereli
ENSHCOG00000014952	rbm12b	100	36.585	ENSPVAG00000011803	RBM12B	71	36.585	Pteropus_vampyrus
ENSHCOG00000014952	rbm12b	100	55.799	ENSPNYG00000016696	rbm12b	100	55.799	Pundamilia_nyererei
ENSHCOG00000014952	rbm12b	100	43.958	ENSPNAG00000008126	rbm12b	97	44.817	Pygocentrus_nattereri
ENSHCOG00000014952	rbm12b	71	46.789	ENSPNAG00000025628	zgc:153215	77	46.789	Pygocentrus_nattereri
ENSHCOG00000014952	rbm12b	77	37.398	ENSRNOG00000055292	LOC679087	65	37.398	Rattus_norvegicus
ENSHCOG00000014952	rbm12b	100	37.398	ENSRNOG00000016330	Rbm12b	75	37.398	Rattus_norvegicus
ENSHCOG00000014952	rbm12b	100	49.351	ENSRBIG00000035046	RBM12B	64	49.351	Rhinopithecus_bieti
ENSHCOG00000014952	rbm12b	100	49.351	ENSRROG00000023660	RBM12B	67	49.351	Rhinopithecus_roxellana
ENSHCOG00000014952	rbm12b	100	49.351	ENSSBOG00000027592	RBM12B	63	49.351	Saimiri_boliviensis_boliviensis
ENSHCOG00000014952	rbm12b	100	40.152	ENSSHAG00000015335	RBM12B	84	40.152	Sarcophilus_harrisii
ENSHCOG00000014952	rbm12b	100	45.808	ENSSFOG00015001584	rbm12b	100	45.889	Scleropages_formosus
ENSHCOG00000014952	rbm12b	77	31.936	ENSSFOG00015009427	zgc:153215	99	31.936	Scleropages_formosus
ENSHCOG00000014952	rbm12b	100	56.515	ENSSMAG00000019708	rbm12b	100	56.515	Scophthalmus_maximus
ENSHCOG00000014952	rbm12b	100	55.725	ENSSDUG00000006856	rbm12b	100	55.725	Seriola_dumerili
ENSHCOG00000014952	rbm12b	97	51.250	ENSSLDG00000013581	zgc:153215	75	51.250	Seriola_lalandi_dorsalis
ENSHCOG00000014952	rbm12b	100	55.420	ENSSLDG00000016156	rbm12b	100	55.420	Seriola_lalandi_dorsalis
ENSHCOG00000014952	rbm12b	77	38.193	ENSSARG00000011845	-	66	38.193	Sorex_araneus
ENSHCOG00000014952	rbm12b	100	34.226	ENSSPUG00000016954	RBM12B	91	34.556	Sphenodon_punctatus
ENSHCOG00000014952	rbm12b	100	56.044	ENSSPAG00000006774	rbm12b	100	56.044	Stegastes_partitus
ENSHCOG00000014952	rbm12b	89	48.000	ENSSSCG00000006110	RBM12B	57	48.000	Sus_scrofa
ENSHCOG00000014952	rbm12b	77	37.022	ENSTGUG00000011860	RBM12B	95	37.022	Taeniopygia_guttata
ENSHCOG00000014952	rbm12b	100	50.078	ENSTRUG00000013738	rbm12b	100	50.706	Takifugu_rubripes
ENSHCOG00000014952	rbm12b	77	36.008	ENSTBEG00000000449	RBM12B	62	36.008	Tupaia_belangeri
ENSHCOG00000014952	rbm12b	90	49.351	ENSUAMG00000023639	RBM12B	63	49.351	Ursus_americanus
ENSHCOG00000014952	rbm12b	90	49.351	ENSUMAG00000016008	RBM12B	61	49.351	Ursus_maritimus
ENSHCOG00000014952	rbm12b	90	48.052	ENSVVUG00000002694	RBM12B	64	48.052	Vulpes_vulpes
ENSHCOG00000014952	rbm12b	100	33.480	ENSXETG00000014694	rbm12b	99	36.458	Xenopus_tropicalis
ENSHCOG00000014952	rbm12b	69	54.072	ENSXCOG00000019735	-	99	54.072	Xiphophorus_couchianus
ENSHCOG00000014952	rbm12b	63	37.500	ENSXMAG00000013169	-	93	37.500	Xiphophorus_maculatus
ENSHCOG00000014952	rbm12b	100	52.821	ENSXMAG00000014213	rbm12b	100	52.821	Xiphophorus_maculatus