EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSHCOG00000015109 (Gene tree)
Gene ID
109507695
Gene Symbol
sf3a3
Alias
wu:fi15a06|wu:fj94f01|zgc:110227
Full Name
splicing factor 3a subunit 3
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
16174 bases
Position
chrKV880485.1:317720-333893
Accession
109507695
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000025141SF3a60_bindingdPF12108.89.2e-1211
ENSHCOP00000012096SF3a60_bindingdPF12108.89.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000019047-1845XM_019857302ENSHCOP00000025141501 (aa)XP_019712861UPI00094F0EEA
ENSHCOT00000026806-1500-ENSHCOP00000012096499 (aa)--
Gene Model
Click here to download ENSHCOG00000015109's gene model file
Pathways
Pathway IDPathway NameSource
hcq03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015109's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000015109sf3a310089.022ENSG00000183431SF3A310089.022Homo_sapiens
ENSHCOG00000015109sf3a310095.210ENSAPOG00000015608sf3a310095.210Acanthochromis_polyacanthus
ENSHCOG00000015109sf3a310089.022ENSAMEG00000001262SF3A310089.022Ailuropoda_melanoleuca
ENSHCOG00000015109sf3a39294.336ENSACIG00000009061sf3a39988.560Amphilophus_citrinellus
ENSHCOG00000015109sf3a310095.010ENSAOCG00000013954sf3a310095.010Amphiprion_ocellaris
ENSHCOG00000015109sf3a310095.010ENSAPEG00000007297sf3a310095.010Amphiprion_percula
ENSHCOG00000015109sf3a310095.808ENSATEG00000008754sf3a310095.808Anabas_testudineus
ENSHCOG00000015109sf3a39489.552ENSAPLG00000014900SF3A310089.552Anas_platyrhynchos
ENSHCOG00000015109sf3a310087.625ENSACAG00000017058SF3A310087.625Anolis_carolinensis
ENSHCOG00000015109sf3a310068.862ENSANAG00000036903-10068.862Aotus_nancymaae
ENSHCOG00000015109sf3a39986.145ENSANAG00000014878SF3A310086.145Aotus_nancymaae
ENSHCOG00000015109sf3a310095.210ENSACLG00000017977sf3a310095.210Astatotilapia_calliptera
ENSHCOG00000015109sf3a310091.816ENSAMXG00000016855sf3a38791.816Astyanax_mexicanus
ENSHCOG00000015109sf3a310089.022ENSBTAG00000007299SF3A310089.022Bos_taurus
ENSHCOG00000015109sf3a310051.491WBGene00011758T13H5.410051.491Caenorhabditis_elegans
ENSHCOG00000015109sf3a310089.022ENSCJAG00000002176SF3A310089.022Callithrix_jacchus
ENSHCOG00000015109sf3a310089.022ENSCAFG00000000683-10089.022Canis_familiaris
ENSHCOG00000015109sf3a310089.022ENSCAFG00000003222-10089.022Canis_familiaris
ENSHCOG00000015109sf3a310089.022ENSCAFG00020006186SF3A310089.022Canis_lupus_dingo
ENSHCOG00000015109sf3a310089.022ENSCHIG00000020638SF3A310089.022Capra_hircus
ENSHCOG00000015109sf3a310082.834ENSTSYG00000008417SF3A310082.834Carlito_syrichta
ENSHCOG00000015109sf3a38559.268ENSCAPG00000003466SF3A310056.293Cavia_aperea
ENSHCOG00000015109sf3a310089.222ENSCPOG00000008660SF3A310089.222Cavia_porcellus
ENSHCOG00000015109sf3a310089.022ENSCCAG00000033732SF3A310089.022Cebus_capucinus
ENSHCOG00000015109sf3a310063.273ENSCCAG00000034048-10060.279Cebus_capucinus
ENSHCOG00000015109sf3a39472.495ENSCATG00000041660-10073.987Cercocebus_atys
ENSHCOG00000015109sf3a310089.022ENSCATG00000043496SF3A310089.022Cercocebus_atys
ENSHCOG00000015109sf3a310065.936ENSCATG00000043537-10066.534Cercocebus_atys
ENSHCOG00000015109sf3a310089.022ENSCLAG00000010838SF3A310089.022Chinchilla_lanigera
ENSHCOG00000015109sf3a39588.445ENSCSAG00000001120SF3A310088.445Chlorocebus_sabaeus
ENSHCOG00000015109sf3a37885.714ENSCHOG00000006849SF3A37985.714Choloepus_hoffmanni
ENSHCOG00000015109sf3a37160.111ENSCPBG00000007472-9560.111Chrysemys_picta_bellii
ENSHCOG00000015109sf3a310080.838ENSCPBG00000018291-10080.838Chrysemys_picta_bellii
ENSHCOG00000015109sf3a310067.530ENSCING00000002730-10067.530Ciona_intestinalis
ENSHCOG00000015109sf3a310066.267ENSCSAVG00000005063-10066.267Ciona_savignyi
ENSHCOG00000015109sf3a310063.273ENSCANG00000035535-10063.273Colobus_angolensis_palliatus
ENSHCOG00000015109sf3a310089.022ENSCANG00000042083SF3A310089.022Colobus_angolensis_palliatus
ENSHCOG00000015109sf3a310089.222ENSCGRG00001011320Sf3a310089.222Cricetulus_griseus_chok1gshd
ENSHCOG00000015109sf3a310089.222ENSCGRG00000012156Sf3a310089.222Cricetulus_griseus_crigri
ENSHCOG00000015109sf3a310093.812ENSCSEG00000010401sf3a310093.812Cynoglossus_semilaevis
ENSHCOG00000015109sf3a39493.817ENSCVAG00000010239sf3a39593.817Cyprinodon_variegatus
ENSHCOG00000015109sf3a310090.818ENSDARG00000100114sf3a310091.885Danio_rerio
ENSHCOG00000015109sf3a39288.235ENSDNOG00000046628SF3A310088.235Dasypus_novemcinctus
ENSHCOG00000015109sf3a310089.222ENSDORG00000008798Sf3a310089.222Dipodomys_ordii
ENSHCOG00000015109sf3a310065.020FBgn0014366noi10064.822Drosophila_melanogaster
ENSHCOG00000015109sf3a310077.734ENSEBUG00000015411sf3a39278.131Eptatretus_burgeri
ENSHCOG00000015109sf3a310089.022ENSEASG00005012906SF3A310089.022Equus_asinus_asinus
ENSHCOG00000015109sf3a310089.022ENSECAG00000017333SF3A310089.022Equus_caballus
ENSHCOG00000015109sf3a310090.818ENSELUG00000010024sf3a310090.818Esox_lucius
ENSHCOG00000015109sf3a310089.022ENSFCAG00000027772SF3A310089.022Felis_catus
ENSHCOG00000015109sf3a310089.222ENSFALG00000001003SF3A310089.222Ficedula_albicollis
ENSHCOG00000015109sf3a310089.222ENSFDAG00000020908SF3A310089.222Fukomys_damarensis
ENSHCOG00000015109sf3a310094.810ENSFHEG00000019107sf3a310094.810Fundulus_heteroclitus
ENSHCOG00000015109sf3a310090.818ENSGMOG00000015540sf3a310090.818Gadus_morhua
ENSHCOG00000015109sf3a310089.022ENSGALG00000001540SF3A310089.022Gallus_gallus
ENSHCOG00000015109sf3a310094.012ENSGAFG00000002320sf3a310094.012Gambusia_affinis
ENSHCOG00000015109sf3a310094.411ENSGACG00000007842sf3a310094.411Gasterosteus_aculeatus
ENSHCOG00000015109sf3a310088.423ENSGAGG00000014980SF3A310088.423Gopherus_agassizii
ENSHCOG00000015109sf3a310069.062ENSGGOG00000022611-10068.663Gorilla_gorilla
ENSHCOG00000015109sf3a310089.022ENSGGOG00000013928SF3A310089.022Gorilla_gorilla
ENSHCOG00000015109sf3a310095.210ENSHBUG00000018158sf3a310095.395Haplochromis_burtoni
ENSHCOG00000015109sf3a310089.222ENSHGLG00000012502SF3A310089.222Heterocephalus_glaber_female
ENSHCOG00000015109sf3a310089.222ENSHGLG00100010546SF3A310089.222Heterocephalus_glaber_male
ENSHCOG00000015109sf3a310092.216ENSIPUG00000011603sf3a310092.216Ictalurus_punctatus
ENSHCOG00000015109sf3a310089.022ENSSTOG00000001691SF3A310089.022Ictidomys_tridecemlineatus
ENSHCOG00000015109sf3a310089.421ENSJJAG00000012404Sf3a310089.421Jaculus_jaculus
ENSHCOG00000015109sf3a310095.010ENSKMAG00000007632sf3a310095.010Kryptolebias_marmoratus
ENSHCOG00000015109sf3a310086.255ENSLBEG00000000816sf3a310086.255Labrus_bergylta
ENSHCOG00000015109sf3a310092.415ENSLOCG00000003273sf3a310092.415Lepisosteus_oculatus
ENSHCOG00000015109sf3a310077.246ENSLAFG00000008094SF3A310077.246Loxodonta_africana
ENSHCOG00000015109sf3a39471.429ENSMFAG00000036706-10073.134Macaca_fascicularis
ENSHCOG00000015109sf3a310089.022ENSMFAG00000043047SF3A310089.022Macaca_fascicularis
ENSHCOG00000015109sf3a310089.022ENSMMUG00000023199SF3A310089.022Macaca_mulatta
ENSHCOG00000015109sf3a310070.259ENSMMUG00000038820-10071.856Macaca_mulatta
ENSHCOG00000015109sf3a39469.296ENSMNEG00000028686-10071.002Macaca_nemestrina
ENSHCOG00000015109sf3a310089.022ENSMNEG00000044291SF3A310089.022Macaca_nemestrina
ENSHCOG00000015109sf3a310089.022ENSMLEG00000030641SF3A310089.022Mandrillus_leucophaeus
ENSHCOG00000015109sf3a310074.451ENSMLEG00000036714-10075.848Mandrillus_leucophaeus
ENSHCOG00000015109sf3a310065.339ENSMLEG00000028631-10065.936Mandrillus_leucophaeus
ENSHCOG00000015109sf3a310096.008ENSMAMG00000001942sf3a310096.008Mastacembelus_armatus
ENSHCOG00000015109sf3a310095.210ENSMZEG00005016987sf3a310095.210Maylandia_zebra
ENSHCOG00000015109sf3a310084.891ENSMGAG00000002875SF3A310084.891Meleagris_gallopavo
ENSHCOG00000015109sf3a310085.030ENSMICG00000001485-10085.030Microcebus_murinus
ENSHCOG00000015109sf3a39285.996ENSMICG00000026541-10086.026Microcebus_murinus
ENSHCOG00000015109sf3a310083.034ENSMICG00000043548-10083.034Microcebus_murinus
ENSHCOG00000015109sf3a310086.427ENSMOCG00000019939-10086.427Microtus_ochrogaster
ENSHCOG00000015109sf3a39583.579ENSMOCG00000014565-9782.316Microtus_ochrogaster
ENSHCOG00000015109sf3a310094.810ENSMMOG00000014307sf3a310094.810Mola_mola
ENSHCOG00000015109sf3a310081.437ENSMODG00000024045-10081.437Monodelphis_domestica
ENSHCOG00000015109sf3a310069.515ENSMODG00000017729-10068.533Monodelphis_domestica
ENSHCOG00000015109sf3a310094.611ENSMALG00000004836sf3a310094.956Monopterus_albus
ENSHCOG00000015109sf3a310089.222MGP_CAROLIEiJ_G0026449Sf3a310089.222Mus_caroli
ENSHCOG00000015109sf3a310089.222ENSMUSG00000028902Sf3a310089.222Mus_musculus
ENSHCOG00000015109sf3a310083.633MGP_PahariEiJ_G0028780Sf3a310083.633Mus_pahari
ENSHCOG00000015109sf3a310089.222MGP_SPRETEiJ_G0027428Sf3a310089.222Mus_spretus
ENSHCOG00000015109sf3a310089.222ENSMLUG00000000991SF3A310089.222Myotis_lucifugus
ENSHCOG00000015109sf3a310084.232ENSNGAG00000018032Sf3a310084.232Nannospalax_galili
ENSHCOG00000015109sf3a310081.637ENSNLEG00000011720SF3A310081.637Nomascus_leucogenys
ENSHCOG00000015109sf3a310089.222ENSOPRG00000012785SF3A310089.222Ochotona_princeps
ENSHCOG00000015109sf3a310075.498ENSODEG00000000937-10077.888Octodon_degus
ENSHCOG00000015109sf3a310085.429ENSODEG00000007470-10085.429Octodon_degus
ENSHCOG00000015109sf3a310083.633ENSODEG00000006854-10086.228Octodon_degus
ENSHCOG00000015109sf3a310077.645ENSODEG00000018393-10077.445Octodon_degus
ENSHCOG00000015109sf3a38795.402ENSONIG00000010296sf3a310095.402Oreochromis_niloticus
ENSHCOG00000015109sf3a39488.699ENSOANG00000002473SF3A310088.699Ornithorhynchus_anatinus
ENSHCOG00000015109sf3a310089.222ENSOCUG00000005407SF3A310089.222Oryctolagus_cuniculus
ENSHCOG00000015109sf3a310093.014ENSORLG00000008175sf3a310093.014Oryzias_latipes
ENSHCOG00000015109sf3a310093.214ENSORLG00020013708sf3a310093.214Oryzias_latipes_hni
ENSHCOG00000015109sf3a310092.615ENSORLG00015004104sf3a310092.615Oryzias_latipes_hsok
ENSHCOG00000015109sf3a310093.214ENSOMEG00000020177sf3a310093.214Oryzias_melastigma
ENSHCOG00000015109sf3a310089.022ENSOARG00000019950SF3A310089.022Ovis_aries
ENSHCOG00000015109sf3a310089.022ENSPPAG00000034066SF3A310089.022Pan_paniscus
ENSHCOG00000015109sf3a310068.064ENSPPAG00000039955-10067.665Pan_paniscus
ENSHCOG00000015109sf3a310089.022ENSPPRG00000001258SF3A310089.022Panthera_pardus
ENSHCOG00000015109sf3a310089.022ENSPTIG00000007515SF3A310089.022Panthera_tigris_altaica
ENSHCOG00000015109sf3a310069.261ENSPTRG00000046013-10068.862Pan_troglodytes
ENSHCOG00000015109sf3a310089.022ENSPTRG00000000559SF3A310089.022Pan_troglodytes
ENSHCOG00000015109sf3a38781.818ENSPANG00000031214-10063.872Papio_anubis
ENSHCOG00000015109sf3a310089.022ENSPANG00000021859SF3A310089.022Papio_anubis
ENSHCOG00000015109sf3a310076.846ENSPANG00000029393-10078.244Papio_anubis
ENSHCOG00000015109sf3a310091.218ENSPKIG00000004719sf3a310091.218Paramormyrops_kingsleyae
ENSHCOG00000015109sf3a310086.481ENSPSIG00000004273SF3A310086.481Pelodiscus_sinensis
ENSHCOG00000015109sf3a39293.043ENSPMGG00000003610sf3a39493.435Periophthalmus_magnuspinnatus
ENSHCOG00000015109sf3a310089.222ENSPEMG00000020805Sf3a310089.222Peromyscus_maniculatus_bairdii
ENSHCOG00000015109sf3a35476.667ENSPMAG00000001044sf3a39876.667Petromyzon_marinus
ENSHCOG00000015109sf3a310088.822ENSPCIG00000025719SF3A310088.822Phascolarctos_cinereus
ENSHCOG00000015109sf3a310094.012ENSPFOG00000005284sf3a310094.012Poecilia_formosa
ENSHCOG00000015109sf3a39990.744ENSPLAG00000003979sf3a39290.744Poecilia_latipinna
ENSHCOG00000015109sf3a37988.804ENSPMEG00000021132sf3a38888.804Poecilia_mexicana
ENSHCOG00000015109sf3a310094.212ENSPREG00000013802sf3a310094.212Poecilia_reticulata
ENSHCOG00000015109sf3a310086.627ENSPPYG00000001519SF3A310086.627Pongo_abelii
ENSHCOG00000015109sf3a310082.435ENSPCAG00000010734SF3A310082.435Procavia_capensis
ENSHCOG00000015109sf3a310077.976ENSPCOG00000020389-10077.976Propithecus_coquereli
ENSHCOG00000015109sf3a310073.054ENSPCOG00000017131-10073.054Propithecus_coquereli
ENSHCOG00000015109sf3a310077.645ENSPVAG00000010158SF3A310077.645Pteropus_vampyrus
ENSHCOG00000015109sf3a310095.210ENSPNYG00000000786sf3a310095.210Pundamilia_nyererei
ENSHCOG00000015109sf3a310092.216ENSPNAG00000010298sf3a310092.216Pygocentrus_nattereri
ENSHCOG00000015109sf3a310089.222ENSRNOG00000007629Sf3a310089.222Rattus_norvegicus
ENSHCOG00000015109sf3a310066.467ENSRBIG00000041123-10066.467Rhinopithecus_bieti
ENSHCOG00000015109sf3a310089.022ENSRBIG00000043567SF3A310089.022Rhinopithecus_bieti
ENSHCOG00000015109sf3a310065.669ENSRBIG00000043833-10065.868Rhinopithecus_bieti
ENSHCOG00000015109sf3a39471.215ENSRROG00000032346-10071.215Rhinopithecus_roxellana
ENSHCOG00000015109sf3a310089.022ENSRROG00000033888SF3A310089.022Rhinopithecus_roxellana
ENSHCOG00000015109sf3a38392.744ENSSBOG00000032688SF3A310092.453Saimiri_boliviensis_boliviensis
ENSHCOG00000015109sf3a310064.870ENSSBOG00000026932-10063.872Saimiri_boliviensis_boliviensis
ENSHCOG00000015109sf3a39089.625ENSSHAG00000014530SF3A310089.625Sarcophilus_harrisii
ENSHCOG00000015109sf3a310092.814ENSSFOG00015005975sf3a310092.814Scleropages_formosus
ENSHCOG00000015109sf3a310095.210ENSSMAG00000020213sf3a310095.210Scophthalmus_maximus
ENSHCOG00000015109sf3a310091.417ENSSDUG00000011590sf3a310091.417Seriola_dumerili
ENSHCOG00000015109sf3a310095.609ENSSLDG00000020635sf3a310095.609Seriola_lalandi_dorsalis
ENSHCOG00000015109sf3a310088.423ENSSPUG00000004010SF3A310088.423Sphenodon_punctatus
ENSHCOG00000015109sf3a310095.409ENSSPAG00000018653sf3a310095.409Stegastes_partitus
ENSHCOG00000015109sf3a310089.022ENSSSCG00000003643SF3A310089.022Sus_scrofa
ENSHCOG00000015109sf3a38790.345ENSTGUG00000001466SF3A39990.345Taeniopygia_guttata
ENSHCOG00000015109sf3a310094.810ENSTRUG00000009089sf3a310094.810Takifugu_rubripes
ENSHCOG00000015109sf3a310094.433ENSTNIG00000009800sf3a310094.433Tetraodon_nigroviridis
ENSHCOG00000015109sf3a310077.645ENSTBEG00000007614SF3A310077.645Tupaia_belangeri
ENSHCOG00000015109sf3a310088.822ENSTTRG00000013519SF3A310088.822Tursiops_truncatus
ENSHCOG00000015109sf3a310089.022ENSUAMG00000006134SF3A310089.022Ursus_americanus
ENSHCOG00000015109sf3a310089.022ENSUMAG00000021250SF3A310089.022Ursus_maritimus
ENSHCOG00000015109sf3a36695.349ENSVPAG00000004778SF3A37395.349Vicugna_pacos
ENSHCOG00000015109sf3a310085.230ENSVVUG00000022908SF3A310085.230Vulpes_vulpes
ENSHCOG00000015109sf3a310086.427ENSXETG00000022923sf3a310086.427Xenopus_tropicalis
ENSHCOG00000015109sf3a310094.012ENSXMAG00000017165sf3a310094.012Xiphophorus_maculatus

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