EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015161 (Gene tree)
Gene ID: 109514894
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rap-1b-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 627 bases
Position: chrKV879887.1:536028-536654
Accession: 109514894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012186	MMR_HSR1	PF01926.23	9.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019126	-	627	XM_019868330	ENSHCOP00000012186	208 (aa)	XP_019723889	UPI00094E499F

Gene Model

Click here to download ENSHCOG00000015161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015161	-	77	30.539	ENSHCOG00000015692	si:dkey-34d22.5	75	30.539
ENSHCOG00000015161	-	93	30.457	ENSHCOG00000006550	-	92	30.457
ENSHCOG00000015161	-	76	30.435	ENSHCOG00000003667	rhebl1	85	30.435
ENSHCOG00000015161	-	78	30.675	ENSHCOG00000011080	kras	85	30.675
ENSHCOG00000015161	-	77	32.927	ENSHCOG00000005802	RAB9A	76	32.927
ENSHCOG00000015161	-	72	34.667	ENSHCOG00000018456	si:ch73-116o1.2	76	35.625
ENSHCOG00000015161	-	100	72.115	ENSHCOG00000018554	rasd4	100	72.115
ENSHCOG00000015161	-	75	31.250	ENSHCOG00000007440	rab13	86	31.250
ENSHCOG00000015161	-	77	30.636	ENSHCOG00000010738	rasl10a	84	31.792
ENSHCOG00000015161	-	77	30.303	ENSHCOG00000005024	rab9b	81	30.303
ENSHCOG00000015161	-	74	30.323	ENSHCOG00000006538	si:dkey-16l2.16	73	30.323
ENSHCOG00000015161	-	77	31.707	ENSHCOG00000013807	rheb	87	31.707
ENSHCOG00000015161	-	77	31.515	ENSHCOG00000004086	rab9a	81	31.515
ENSHCOG00000015161	-	71	30.573	ENSHCOG00000019709	rasl11a	64	30.573
ENSHCOG00000015161	-	82	32.386	ENSHCOG00000002043	rras2	87	32.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015161	-	100	79.327	ENSAPOG00000014798	-	100	79.327	Acanthochromis_polyacanthus
ENSHCOG00000015161	-	100	54.460	ENSAPOG00000019479	rasd3	100	54.460	Acanthochromis_polyacanthus
ENSHCOG00000015161	-	100	77.404	ENSAPOG00000013337	rasd4	100	77.404	Acanthochromis_polyacanthus
ENSHCOG00000015161	-	100	76.923	ENSACIG00000008211	rasd4	100	76.923	Amphilophus_citrinellus
ENSHCOG00000015161	-	100	82.212	ENSACIG00000006211	-	100	82.212	Amphilophus_citrinellus
ENSHCOG00000015161	-	100	79.327	ENSAOCG00000013791	-	100	79.327	Amphiprion_ocellaris
ENSHCOG00000015161	-	100	77.885	ENSAOCG00000011925	rasd4	100	77.885	Amphiprion_ocellaris
ENSHCOG00000015161	-	100	79.327	ENSAPEG00000014385	-	100	79.327	Amphiprion_percula
ENSHCOG00000015161	-	100	77.885	ENSAPEG00000001236	rasd4	100	77.885	Amphiprion_percula
ENSHCOG00000015161	-	100	77.404	ENSATEG00000004192	-	100	77.404	Anabas_testudineus
ENSHCOG00000015161	-	100	81.731	ENSATEG00000004140	rasd4	100	81.731	Anabas_testudineus
ENSHCOG00000015161	-	100	76.442	ENSACLG00000005453	-	100	76.442	Astatotilapia_calliptera
ENSHCOG00000015161	-	99	76.585	ENSCSEG00000003581	rasd4	97	76.585	Cynoglossus_semilaevis
ENSHCOG00000015161	-	100	79.808	ENSCSEG00000017910	-	100	79.808	Cynoglossus_semilaevis
ENSHCOG00000015161	-	100	79.327	ENSCVAG00000014662	-	100	79.327	Cyprinodon_variegatus
ENSHCOG00000015161	-	99	72.947	ENSCVAG00000004658	rasd4	99	72.947	Cyprinodon_variegatus
ENSHCOG00000015161	-	87	48.108	FBgn0040370	CG13375	67	48.108	Drosophila_melanogaster
ENSHCOG00000015161	-	87	49.171	ENSEBUG00000013908	rasd3	82	49.171	Eptatretus_burgeri
ENSHCOG00000015161	-	100	73.460	ENSELUG00000008115	-	100	73.460	Esox_lucius
ENSHCOG00000015161	-	99	69.756	ENSFALG00000000852	-	99	69.756	Ficedula_albicollis
ENSHCOG00000015161	-	100	79.327	ENSFHEG00000016103	-	100	79.327	Fundulus_heteroclitus
ENSHCOG00000015161	-	100	75.481	ENSFHEG00000003385	rasd4	100	75.481	Fundulus_heteroclitus
ENSHCOG00000015161	-	100	75.481	ENSGAFG00000010126	rasd4	100	75.481	Gambusia_affinis
ENSHCOG00000015161	-	100	77.404	ENSGACG00000019357	rasd4	100	77.404	Gasterosteus_aculeatus
ENSHCOG00000015161	-	99	71.220	ENSGAGG00000022039	-	99	71.220	Gopherus_agassizii
ENSHCOG00000015161	-	100	76.442	ENSHBUG00000003805	-	100	76.442	Haplochromis_burtoni
ENSHCOG00000015161	-	100	67.788	ENSIPUG00000021888	-	100	67.788	Ictalurus_punctatus
ENSHCOG00000015161	-	100	75.481	ENSKMAG00000000984	rasd4	100	75.481	Kryptolebias_marmoratus
ENSHCOG00000015161	-	100	67.788	ENSLACG00000003581	rasd3	100	67.788	Latimeria_chalumnae
ENSHCOG00000015161	-	100	69.712	ENSLACG00000001282	-	100	69.712	Latimeria_chalumnae
ENSHCOG00000015161	-	100	73.558	ENSLOCG00000017761	rasd4	100	73.558	Lepisosteus_oculatus
ENSHCOG00000015161	-	100	62.559	ENSLOCG00000018104	rasd3	100	62.559	Lepisosteus_oculatus
ENSHCOG00000015161	-	100	76.923	ENSMAMG00000001194	-	100	76.923	Mastacembelus_armatus
ENSHCOG00000015161	-	100	76.442	ENSMZEG00005023931	-	100	76.442	Maylandia_zebra
ENSHCOG00000015161	-	100	82.692	ENSMMOG00000012444	rasd4	100	82.692	Mola_mola
ENSHCOG00000015161	-	100	81.731	ENSMALG00000019233	rasd4	100	81.731	Monopterus_albus
ENSHCOG00000015161	-	100	76.442	ENSMALG00000022582	-	100	76.442	Monopterus_albus
ENSHCOG00000015161	-	100	83.173	ENSNBRG00000001521	-	100	83.173	Neolamprologus_brichardi
ENSHCOG00000015161	-	100	76.923	ENSONIG00000021230	-	100	76.923	Oreochromis_niloticus
ENSHCOG00000015161	-	100	73.558	ENSORLG00020019402	rasd4	100	73.558	Oryzias_latipes_hni
ENSHCOG00000015161	-	100	73.558	ENSORLG00015019530	rasd4	100	73.558	Oryzias_latipes_hsok
ENSHCOG00000015161	-	100	75.000	ENSOMEG00000019524	-	100	75.000	Oryzias_melastigma
ENSHCOG00000015161	-	100	75.000	ENSOMEG00000010545	rasd4	100	75.000	Oryzias_melastigma
ENSHCOG00000015161	-	100	73.558	ENSPKIG00000007853	rasd4	100	73.558	Paramormyrops_kingsleyae
ENSHCOG00000015161	-	100	59.242	ENSPKIG00000018772	-	100	59.242	Paramormyrops_kingsleyae
ENSHCOG00000015161	-	100	62.085	ENSPKIG00000013103	rasd3	100	62.085	Paramormyrops_kingsleyae
ENSHCOG00000015161	-	99	68.293	ENSPSIG00000001290	-	99	68.293	Pelodiscus_sinensis
ENSHCOG00000015161	-	100	81.250	ENSPMGG00000012580	-	100	81.250	Periophthalmus_magnuspinnatus
ENSHCOG00000015161	-	100	71.635	ENSPMGG00000000859	rasd4	100	71.635	Periophthalmus_magnuspinnatus
ENSHCOG00000015161	-	100	75.481	ENSPLAG00000003951	rasd4	98	75.481	Poecilia_latipinna
ENSHCOG00000015161	-	100	77.404	ENSPLAG00000006115	-	100	77.404	Poecilia_latipinna
ENSHCOG00000015161	-	100	75.962	ENSPMEG00000021391	rasd4	98	75.962	Poecilia_mexicana
ENSHCOG00000015161	-	100	78.846	ENSPMEG00000003690	-	100	78.846	Poecilia_mexicana
ENSHCOG00000015161	-	100	78.365	ENSPREG00000015955	-	100	78.365	Poecilia_reticulata
ENSHCOG00000015161	-	100	75.962	ENSPREG00000017010	rasd4	100	75.962	Poecilia_reticulata
ENSHCOG00000015161	-	100	76.442	ENSPNYG00000016378	-	100	76.442	Pundamilia_nyererei
ENSHCOG00000015161	-	100	69.712	ENSPNAG00000005318	-	100	69.712	Pygocentrus_nattereri
ENSHCOG00000015161	-	99	63.033	ENSSFOG00015008777	rasd3	99	63.033	Scleropages_formosus
ENSHCOG00000015161	-	100	76.442	ENSSFOG00015004613	rasd4	100	76.442	Scleropages_formosus
ENSHCOG00000015161	-	100	76.442	ENSSMAG00000016456	rasd4	100	76.442	Scophthalmus_maximus
ENSHCOG00000015161	-	100	80.769	ENSSMAG00000009101	-	100	80.769	Scophthalmus_maximus
ENSHCOG00000015161	-	100	76.923	ENSSDUG00000020340	-	100	76.923	Seriola_dumerili
ENSHCOG00000015161	-	100	81.250	ENSSDUG00000015982	rasd4	100	81.250	Seriola_dumerili
ENSHCOG00000015161	-	100	81.250	ENSSLDG00000017618	rasd4	100	81.250	Seriola_lalandi_dorsalis
ENSHCOG00000015161	-	100	56.132	ENSSLDG00000016267	rasd3	98	56.132	Seriola_lalandi_dorsalis
ENSHCOG00000015161	-	100	76.442	ENSSLDG00000002757	-	98	76.442	Seriola_lalandi_dorsalis
ENSHCOG00000015161	-	100	77.885	ENSSPAG00000021839	rasd4	100	77.885	Stegastes_partitus
ENSHCOG00000015161	-	100	80.288	ENSSPAG00000011401	-	100	80.288	Stegastes_partitus
ENSHCOG00000015161	-	99	72.683	ENSTGUG00000007747	-	99	72.683	Taeniopygia_guttata
ENSHCOG00000015161	-	100	75.000	ENSTRUG00000022489	rasd4	100	75.000	Takifugu_rubripes
ENSHCOG00000015161	-	100	75.962	ENSXCOG00000013226	rasd4	100	75.962	Xiphophorus_couchianus
ENSHCOG00000015161	-	84	78.286	ENSXMAG00000021609	rasd4	83	78.286	Xiphophorus_maculatus