EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015164 (Gene tree)
Gene ID: 109518045
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6565 bases
Position: chrKV880018.1:147945-154509
Accession: 109518045
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012194	cwf18	PF08315.12	1.3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019119	-	767	XM_019873653	ENSHCOP00000012194	164 (aa)	XP_019729212	UPI00094EE60D

Gene Model

Click here to download ENSHCOG00000015164's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015164's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015164	ccdc12	98	67.284	ENSG00000160799	CCDC12	95	67.284	Homo_sapiens
ENSHCOG00000015164	ccdc12	100	87.195	ENSAPOG00000014426	ccdc12	60	87.195	Acanthochromis_polyacanthus
ENSHCOG00000015164	ccdc12	98	67.901	ENSAMEG00000012658	CCDC12	95	67.901	Ailuropoda_melanoleuca
ENSHCOG00000015164	ccdc12	73	87.395	ENSACIG00000022676	-	85	87.395	Amphilophus_citrinellus
ENSHCOG00000015164	ccdc12	68	89.286	ENSACIG00000015192	ccdc12	80	89.286	Amphilophus_citrinellus
ENSHCOG00000015164	ccdc12	98	88.125	ENSAOCG00000024127	ccdc12	95	88.125	Amphiprion_ocellaris
ENSHCOG00000015164	ccdc12	100	87.805	ENSAPEG00000009155	ccdc12	86	87.805	Amphiprion_percula
ENSHCOG00000015164	ccdc12	82	88.889	ENSATEG00000004807	ccdc12	100	88.889	Anabas_testudineus
ENSHCOG00000015164	ccdc12	79	70.769	ENSAPLG00000005482	CCDC12	95	70.769	Anas_platyrhynchos
ENSHCOG00000015164	ccdc12	97	70.732	ENSACAG00000004727	CCDC12	83	70.732	Anolis_carolinensis
ENSHCOG00000015164	ccdc12	82	68.148	ENSANAG00000024483	CCDC12	100	68.148	Aotus_nancymaae
ENSHCOG00000015164	ccdc12	100	85.366	ENSACLG00000005356	ccdc12	100	85.366	Astatotilapia_calliptera
ENSHCOG00000015164	ccdc12	95	75.641	ENSACLG00000012742	-	96	75.641	Astatotilapia_calliptera
ENSHCOG00000015164	ccdc12	100	78.049	ENSAMXG00000016319	ccdc12	100	78.049	Astyanax_mexicanus
ENSHCOG00000015164	ccdc12	89	70.068	ENSBTAG00000011311	CCDC12	96	66.667	Bos_taurus
ENSHCOG00000015164	ccdc12	83	41.304	WBGene00022092	Y69A2AR.21	87	39.744	Caenorhabditis_elegans
ENSHCOG00000015164	ccdc12	98	66.871	ENSCJAG00000002280	CCDC12	96	66.871	Callithrix_jacchus
ENSHCOG00000015164	ccdc12	98	67.901	ENSCAFG00000013588	CCDC12	95	67.901	Canis_familiaris
ENSHCOG00000015164	ccdc12	98	67.901	ENSCAFG00020014024	CCDC12	88	67.901	Canis_lupus_dingo
ENSHCOG00000015164	ccdc12	89	70.068	ENSCHIG00000014512	CCDC12	96	66.667	Capra_hircus
ENSHCOG00000015164	ccdc12	98	67.901	ENSTSYG00000032837	CCDC12	95	67.901	Carlito_syrichta
ENSHCOG00000015164	ccdc12	98	66.049	ENSCPOG00000032515	CCDC12	95	67.901	Cavia_porcellus
ENSHCOG00000015164	ccdc12	98	66.871	ENSCCAG00000020126	CCDC12	89	66.871	Cebus_capucinus
ENSHCOG00000015164	ccdc12	98	55.828	ENSCATG00000033681	CCDC12	89	55.828	Cercocebus_atys
ENSHCOG00000015164	ccdc12	98	66.049	ENSCLAG00000016013	CCDC12	95	67.901	Chinchilla_lanigera
ENSHCOG00000015164	ccdc12	98	66.258	ENSCSAG00000016154	CCDC12	89	66.258	Chlorocebus_sabaeus
ENSHCOG00000015164	ccdc12	98	68.323	ENSCPBG00000015804	CCDC12	77	68.323	Chrysemys_picta_bellii
ENSHCOG00000015164	ccdc12	99	50.000	ENSCING00000005261	-	98	50.000	Ciona_intestinalis
ENSHCOG00000015164	ccdc12	98	66.258	ENSCANG00000020857	CCDC12	89	66.258	Colobus_angolensis_palliatus
ENSHCOG00000015164	ccdc12	98	65.031	ENSCGRG00001000459	Ccdc12	96	65.031	Cricetulus_griseus_chok1gshd
ENSHCOG00000015164	ccdc12	98	65.031	ENSCGRG00000012816	Ccdc12	96	65.031	Cricetulus_griseus_crigri
ENSHCOG00000015164	ccdc12	100	87.195	ENSCSEG00000004543	ccdc12	100	87.195	Cynoglossus_semilaevis
ENSHCOG00000015164	ccdc12	82	86.667	ENSCVAG00000011342	ccdc12	100	86.667	Cyprinodon_variegatus
ENSHCOG00000015164	ccdc12	100	80.488	ENSDARG00000023003	ccdc12	100	80.488	Danio_rerio
ENSHCOG00000015164	ccdc12	93	59.868	ENSDORG00000024399	-	90	61.842	Dipodomys_ordii
ENSHCOG00000015164	ccdc12	88	67.808	ENSDORG00000016567	-	96	66.049	Dipodomys_ordii
ENSHCOG00000015164	ccdc12	100	40.936	FBgn0039732	CG15525	98	40.936	Drosophila_melanogaster
ENSHCOG00000015164	ccdc12	66	63.636	ENSETEG00000000030	CCDC12	95	63.636	Echinops_telfairi
ENSHCOG00000015164	ccdc12	100	57.927	ENSEBUG00000005674	ccdc12	100	57.576	Eptatretus_burgeri
ENSHCOG00000015164	ccdc12	98	67.284	ENSEASG00005008148	-	66	67.284	Equus_asinus_asinus
ENSHCOG00000015164	ccdc12	98	61.728	ENSECAG00000008649	CCDC12	95	61.728	Equus_caballus
ENSHCOG00000015164	ccdc12	100	78.788	ENSELUG00000024105	ccdc12	100	78.788	Esox_lucius
ENSHCOG00000015164	ccdc12	98	67.284	ENSFCAG00000015474	CCDC12	95	67.284	Felis_catus
ENSHCOG00000015164	ccdc12	91	60.265	ENSFALG00000001895	CCDC12	93	60.265	Ficedula_albicollis
ENSHCOG00000015164	ccdc12	98	67.901	ENSFDAG00000002549	CCDC12	96	67.901	Fukomys_damarensis
ENSHCOG00000015164	ccdc12	100	87.195	ENSFHEG00000016247	ccdc12	93	87.195	Fundulus_heteroclitus
ENSHCOG00000015164	ccdc12	100	70.122	ENSGMOG00000016901	ccdc12	100	70.122	Gadus_morhua
ENSHCOG00000015164	ccdc12	100	87.195	ENSGAFG00000006762	ccdc12	100	87.195	Gambusia_affinis
ENSHCOG00000015164	ccdc12	100	85.366	ENSGACG00000008629	ccdc12	100	85.366	Gasterosteus_aculeatus
ENSHCOG00000015164	ccdc12	98	68.323	ENSGAGG00000019688	CCDC12	95	68.323	Gopherus_agassizii
ENSHCOG00000015164	ccdc12	98	67.284	ENSGGOG00000009012	CCDC12	88	67.284	Gorilla_gorilla
ENSHCOG00000015164	ccdc12	100	85.366	ENSHBUG00000016447	ccdc12	100	85.366	Haplochromis_burtoni
ENSHCOG00000015164	ccdc12	98	68.519	ENSHGLG00000014058	CCDC12	95	68.519	Heterocephalus_glaber_female
ENSHCOG00000015164	ccdc12	98	68.519	ENSHGLG00100005918	CCDC12	95	68.519	Heterocephalus_glaber_male
ENSHCOG00000015164	ccdc12	98	77.500	ENSIPUG00000001310	Ccdc12	97	77.500	Ictalurus_punctatus
ENSHCOG00000015164	ccdc12	98	68.519	ENSSTOG00000003085	CCDC12	95	68.519	Ictidomys_tridecemlineatus
ENSHCOG00000015164	ccdc12	98	66.871	ENSJJAG00000014918	Ccdc12	96	66.258	Jaculus_jaculus
ENSHCOG00000015164	ccdc12	100	80.606	ENSKMAG00000013891	ccdc12	100	80.606	Kryptolebias_marmoratus
ENSHCOG00000015164	ccdc12	99	88.344	ENSLBEG00000024714	ccdc12	86	88.344	Labrus_bergylta
ENSHCOG00000015164	ccdc12	100	74.390	ENSLOCG00000005683	ccdc12	92	75.000	Lepisosteus_oculatus
ENSHCOG00000015164	ccdc12	68	72.566	ENSLAFG00000022573	-	99	72.566	Loxodonta_africana
ENSHCOG00000015164	ccdc12	98	64.815	ENSLAFG00000027745	-	98	64.815	Loxodonta_africana
ENSHCOG00000015164	ccdc12	98	66.258	ENSMFAG00000002976	CCDC12	89	66.258	Macaca_fascicularis
ENSHCOG00000015164	ccdc12	98	66.258	ENSMMUG00000019810	CCDC12	89	66.258	Macaca_mulatta
ENSHCOG00000015164	ccdc12	98	66.258	ENSMNEG00000035785	CCDC12	89	66.258	Macaca_nemestrina
ENSHCOG00000015164	ccdc12	98	66.258	ENSMLEG00000038060	CCDC12	89	66.258	Mandrillus_leucophaeus
ENSHCOG00000015164	ccdc12	100	89.634	ENSMAMG00000012165	ccdc12	100	89.634	Mastacembelus_armatus
ENSHCOG00000015164	ccdc12	95	76.282	ENSMZEG00005019013	-	96	76.282	Maylandia_zebra
ENSHCOG00000015164	ccdc12	100	85.976	ENSMZEG00005014728	ccdc12	100	85.976	Maylandia_zebra
ENSHCOG00000015164	ccdc12	79	68.462	ENSMGAG00000002815	CCDC12	90	63.750	Meleagris_gallopavo
ENSHCOG00000015164	ccdc12	98	65.031	ENSMAUG00000008879	Ccdc12	96	65.031	Mesocricetus_auratus
ENSHCOG00000015164	ccdc12	98	66.049	ENSMICG00000032886	CCDC12	95	66.049	Microcebus_murinus
ENSHCOG00000015164	ccdc12	98	64.417	ENSMOCG00000004483	Ccdc12	96	64.417	Microtus_ochrogaster
ENSHCOG00000015164	ccdc12	68	84.685	ENSMMOG00000001860	ccdc12	77	84.685	Mola_mola
ENSHCOG00000015164	ccdc12	98	58.125	ENSMODG00000022615	-	94	58.125	Monodelphis_domestica
ENSHCOG00000015164	ccdc12	98	60.000	ENSMODG00000025021	-	94	60.000	Monodelphis_domestica
ENSHCOG00000015164	ccdc12	98	66.871	ENSMODG00000013967	-	95	67.485	Monodelphis_domestica
ENSHCOG00000015164	ccdc12	100	88.415	ENSMALG00000011850	ccdc12	100	88.415	Monopterus_albus
ENSHCOG00000015164	ccdc12	98	65.644	MGP_CAROLIEiJ_G0032737	-	96	65.644	Mus_caroli
ENSHCOG00000015164	ccdc12	98	65.244	ENSMUSG00000019659	Ccdc12	96	65.244	Mus_musculus
ENSHCOG00000015164	ccdc12	98	65.644	MGP_PahariEiJ_G0015604	Ccdc12	96	65.644	Mus_pahari
ENSHCOG00000015164	ccdc12	98	65.244	MGP_SPRETEiJ_G0033885	Ccdc12	87	75.000	Mus_spretus
ENSHCOG00000015164	ccdc12	98	64.198	ENSMLUG00000009547	CCDC12	95	66.154	Myotis_lucifugus
ENSHCOG00000015164	ccdc12	98	65.031	ENSNGAG00000004149	Ccdc12	96	65.644	Nannospalax_galili
ENSHCOG00000015164	ccdc12	100	76.829	ENSNBRG00000015275	ccdc12	100	76.829	Neolamprologus_brichardi
ENSHCOG00000015164	ccdc12	98	66.871	ENSNLEG00000006219	CCDC12	96	66.871	Nomascus_leucogenys
ENSHCOG00000015164	ccdc12	98	62.346	ENSOPRG00000005086	CCDC12	96	62.346	Ochotona_princeps
ENSHCOG00000015164	ccdc12	98	66.049	ENSODEG00000012202	CCDC12	95	67.901	Octodon_degus
ENSHCOG00000015164	ccdc12	100	85.976	ENSONIG00000003061	ccdc12	100	85.976	Oreochromis_niloticus
ENSHCOG00000015164	ccdc12	81	67.669	ENSOANG00000004263	-	100	67.669	Ornithorhynchus_anatinus
ENSHCOG00000015164	ccdc12	98	67.284	ENSOCUG00000012431	CCDC12	81	67.284	Oryctolagus_cuniculus
ENSHCOG00000015164	ccdc12	100	82.530	ENSORLG00000008126	ccdc12	100	82.530	Oryzias_latipes
ENSHCOG00000015164	ccdc12	100	84.756	ENSORLG00020013927	ccdc12	100	84.756	Oryzias_latipes_hni
ENSHCOG00000015164	ccdc12	100	84.756	ENSORLG00015020115	ccdc12	100	84.756	Oryzias_latipes_hsok
ENSHCOG00000015164	ccdc12	100	84.756	ENSOMEG00000022304	ccdc12	100	84.756	Oryzias_melastigma
ENSHCOG00000015164	ccdc12	100	84.756	ENSOMEG00000014082	ccdc12	100	84.756	Oryzias_melastigma
ENSHCOG00000015164	ccdc12	68	72.072	ENSOGAG00000016807	CCDC12	98	72.072	Otolemur_garnettii
ENSHCOG00000015164	ccdc12	73	72.269	ENSOARG00000006426	CCDC12	100	67.391	Ovis_aries
ENSHCOG00000015164	ccdc12	98	66.049	ENSPPAG00000028782	CCDC12	88	66.049	Pan_paniscus
ENSHCOG00000015164	ccdc12	98	67.284	ENSPPRG00000013547	CCDC12	95	67.284	Panthera_pardus
ENSHCOG00000015164	ccdc12	98	67.284	ENSPTIG00000014875	CCDC12	91	67.284	Panthera_tigris_altaica
ENSHCOG00000015164	ccdc12	98	67.284	ENSPTRG00000014862	CCDC12	88	67.284	Pan_troglodytes
ENSHCOG00000015164	ccdc12	98	66.258	ENSPANG00000017485	CCDC12	91	66.258	Papio_anubis
ENSHCOG00000015164	ccdc12	100	74.390	ENSPKIG00000019130	ccdc12	100	74.390	Paramormyrops_kingsleyae
ENSHCOG00000015164	ccdc12	68	80.180	ENSPSIG00000010867	CCDC12	100	80.180	Pelodiscus_sinensis
ENSHCOG00000015164	ccdc12	100	86.585	ENSPMGG00000012211	ccdc12	100	86.585	Periophthalmus_magnuspinnatus
ENSHCOG00000015164	ccdc12	98	65.031	ENSPEMG00000022196	-	96	65.031	Peromyscus_maniculatus_bairdii
ENSHCOG00000015164	ccdc12	98	50.307	ENSPEMG00000001376	-	96	50.307	Peromyscus_maniculatus_bairdii
ENSHCOG00000015164	ccdc12	96	72.152	ENSPMAG00000000005	ccdc12	92	72.152	Petromyzon_marinus
ENSHCOG00000015164	ccdc12	98	65.625	ENSPCIG00000025941	CCDC12	96	68.323	Phascolarctos_cinereus
ENSHCOG00000015164	ccdc12	100	87.195	ENSPFOG00000000343	ccdc12	100	87.195	Poecilia_formosa
ENSHCOG00000015164	ccdc12	100	87.195	ENSPLAG00000019010	ccdc12	100	87.195	Poecilia_latipinna
ENSHCOG00000015164	ccdc12	88	90.345	ENSPMEG00000022371	ccdc12	81	87.195	Poecilia_mexicana
ENSHCOG00000015164	ccdc12	100	87.195	ENSPREG00000020932	ccdc12	81	87.195	Poecilia_reticulata
ENSHCOG00000015164	ccdc12	98	66.871	ENSPPYG00000013924	CCDC12	79	66.871	Pongo_abelii
ENSHCOG00000015164	ccdc12	98	67.081	ENSPCAG00000005800	CCDC12	95	67.081	Procavia_capensis
ENSHCOG00000015164	ccdc12	98	66.049	ENSPCOG00000018682	CCDC12	88	66.049	Propithecus_coquereli
ENSHCOG00000015164	ccdc12	98	67.284	ENSPVAG00000004204	CCDC12	95	67.284	Pteropus_vampyrus
ENSHCOG00000015164	ccdc12	100	85.976	ENSPNYG00000016295	ccdc12	100	85.976	Pundamilia_nyererei
ENSHCOG00000015164	ccdc12	100	62.424	ENSPNAG00000028558	ccdc12	90	83.929	Pygocentrus_nattereri
ENSHCOG00000015164	ccdc12	98	65.644	ENSRNOG00000020946	Ccdc12	96	65.644	Rattus_norvegicus
ENSHCOG00000015164	ccdc12	98	66.258	ENSRBIG00000039910	CCDC12	89	66.258	Rhinopithecus_bieti
ENSHCOG00000015164	ccdc12	98	66.258	ENSRROG00000039721	CCDC12	96	66.258	Rhinopithecus_roxellana
ENSHCOG00000015164	ccdc12	98	66.871	ENSSBOG00000035443	CCDC12	89	66.871	Saimiri_boliviensis_boliviensis
ENSHCOG00000015164	ccdc12	98	67.284	ENSSHAG00000003265	-	96	67.284	Sarcophilus_harrisii
ENSHCOG00000015164	ccdc12	100	74.390	ENSSFOG00015001307	ccdc12	100	74.390	Scleropages_formosus
ENSHCOG00000015164	ccdc12	91	88.591	ENSSMAG00000019856	ccdc12	100	86.667	Scophthalmus_maximus
ENSHCOG00000015164	ccdc12	100	85.366	ENSSDUG00000006549	ccdc12	100	85.366	Seriola_dumerili
ENSHCOG00000015164	ccdc12	100	89.024	ENSSLDG00000015956	ccdc12	100	89.024	Seriola_lalandi_dorsalis
ENSHCOG00000015164	ccdc12	90	47.973	ENSSPUG00000013054	CCDC12	91	47.973	Sphenodon_punctatus
ENSHCOG00000015164	ccdc12	100	87.195	ENSSPAG00000007010	ccdc12	100	87.195	Stegastes_partitus
ENSHCOG00000015164	ccdc12	62	47.059	ENSSSCG00000007882	-	70	47.059	Sus_scrofa
ENSHCOG00000015164	ccdc12	98	66.667	ENSSSCG00000011329	-	96	66.667	Sus_scrofa
ENSHCOG00000015164	ccdc12	66	61.468	ENSTGUG00000000186	CCDC12	86	61.468	Taeniopygia_guttata
ENSHCOG00000015164	ccdc12	100	72.561	ENSTRUG00000014023	ccdc12	85	72.561	Takifugu_rubripes
ENSHCOG00000015164	ccdc12	100	81.707	ENSTNIG00000018407	ccdc12	98	81.707	Tetraodon_nigroviridis
ENSHCOG00000015164	ccdc12	98	45.062	ENSTBEG00000000048	CCDC12	95	45.062	Tupaia_belangeri
ENSHCOG00000015164	ccdc12	98	62.346	ENSTTRG00000015854	CCDC12	95	63.354	Tursiops_truncatus
ENSHCOG00000015164	ccdc12	98	61.728	ENSUAMG00000025548	CCDC12	93	71.533	Ursus_americanus
ENSHCOG00000015164	ccdc12	98	67.901	ENSUMAG00000004346	CCDC12	95	67.901	Ursus_maritimus
ENSHCOG00000015164	ccdc12	66	56.881	ENSVPAG00000000070	-	95	56.881	Vicugna_pacos
ENSHCOG00000015164	ccdc12	98	67.901	ENSVVUG00000004582	CCDC12	95	67.901	Vulpes_vulpes
ENSHCOG00000015164	ccdc12	82	71.111	ENSXETG00000013123	ccdc12	99	71.111	Xenopus_tropicalis
ENSHCOG00000015164	ccdc12	100	86.585	ENSXCOG00000019741	ccdc12	100	86.585	Xiphophorus_couchianus
ENSHCOG00000015164	ccdc12	100	86.585	ENSXMAG00000014098	ccdc12	81	86.585	Xiphophorus_maculatus