EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015208 (Gene tree)
Gene ID: 109512047
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3940 bases
Position: chrKV879816.1:1361506-1365445
Accession: 109512047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025220	Ribosomal_L1	PF00687.21	9.6e-47	1	1
ENSHCOP00000025245	Ribosomal_L1	PF00687.21	9.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019186	-	1313	XM_019863522	ENSHCOP00000025245	352 (aa)	XP_019719081	UPI00094EE1D8
ENSHCOT00000019178	-	1313	-	ENSHCOP00000025220	352 (aa)	-	UPI00094EE1D8

Gene Model

Click here to download ENSHCOG00000015208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015208	rsl1d1	67	43.882	ENSG00000171490	RSL1D1	99	49.485	Homo_sapiens
ENSHCOG00000015208	rsl1d1	71	70.281	ENSAPOG00000004544	rsl1d1	87	63.043	Acanthochromis_polyacanthus
ENSHCOG00000015208	rsl1d1	86	61.921	ENSACIG00000006608	rsl1d1	90	61.921	Amphilophus_citrinellus
ENSHCOG00000015208	rsl1d1	88	61.920	ENSAOCG00000001548	rsl1d1	86	62.893	Amphiprion_ocellaris
ENSHCOG00000015208	rsl1d1	88	61.920	ENSAPEG00000003334	rsl1d1	86	62.893	Amphiprion_percula
ENSHCOG00000015208	rsl1d1	87	62.112	ENSATEG00000009247	rsl1d1	95	58.708	Anabas_testudineus
ENSHCOG00000015208	rsl1d1	83	44.109	ENSAPLG00000004451	RSL1D1	53	53.165	Anas_platyrhynchos
ENSHCOG00000015208	rsl1d1	95	35.248	ENSANAG00000028185	-	60	41.155	Aotus_nancymaae
ENSHCOG00000015208	rsl1d1	86	64.725	ENSACLG00000017535	rsl1d1	86	64.078	Astatotilapia_calliptera
ENSHCOG00000015208	rsl1d1	87	54.012	ENSAMXG00000008624	rsl1d1	65	61.317	Astyanax_mexicanus
ENSHCOG00000015208	rsl1d1	86	36.919	ENSCAFG00020024488	-	50	43.933	Canis_lupus_dingo
ENSHCOG00000015208	rsl1d1	85	39.159	ENSCHIG00000009867	-	55	43.460	Capra_hircus
ENSHCOG00000015208	rsl1d1	68	43.096	ENSCPOG00000010630	RSL1D1	51	43.096	Cavia_porcellus
ENSHCOG00000015208	rsl1d1	84	38.344	ENSCCAG00000031641	-	51	41.393	Cebus_capucinus
ENSHCOG00000015208	rsl1d1	67	41.250	ENSCCAG00000025197	-	51	41.250	Cebus_capucinus
ENSHCOG00000015208	rsl1d1	67	43.882	ENSCATG00000031153	RSL1D1	55	43.882	Cercocebus_atys
ENSHCOG00000015208	rsl1d1	68	40.249	ENSCHOG00000010827	RSL1D1	50	40.249	Choloepus_hoffmanni
ENSHCOG00000015208	rsl1d1	67	51.055	ENSCPBG00000004564	RSL1D1	91	52.195	Chrysemys_picta_bellii
ENSHCOG00000015208	rsl1d1	63	30.222	ENSCING00000011810	-	99	30.222	Ciona_intestinalis
ENSHCOG00000015208	rsl1d1	67	43.882	ENSCANG00000029202	RSL1D1	51	43.882	Colobus_angolensis_palliatus
ENSHCOG00000015208	rsl1d1	88	37.168	ENSCGRG00001014989	Rsl1d1	54	43.515	Cricetulus_griseus_chok1gshd
ENSHCOG00000015208	rsl1d1	88	37.168	ENSCGRG00000001905	Rsl1d1	54	43.515	Cricetulus_griseus_crigri
ENSHCOG00000015208	rsl1d1	89	60.510	ENSCSEG00000019693	rsl1d1	85	60.828	Cynoglossus_semilaevis
ENSHCOG00000015208	rsl1d1	86	60.726	ENSCVAG00000000672	rsl1d1	84	60.726	Cyprinodon_variegatus
ENSHCOG00000015208	rsl1d1	86	56.369	ENSDARG00000055868	rsl1d1	81	54.984	Danio_rerio
ENSHCOG00000015208	rsl1d1	85	36.859	ENSEBUG00000005400	-	58	42.083	Eptatretus_burgeri
ENSHCOG00000015208	rsl1d1	86	62.092	ENSELUG00000019243	rsl1d1	87	61.184	Esox_lucius
ENSHCOG00000015208	rsl1d1	69	44.033	ENSFDAG00000011414	RSL1D1	54	44.033	Fukomys_damarensis
ENSHCOG00000015208	rsl1d1	88	62.658	ENSFHEG00000017235	rsl1d1	83	61.342	Fundulus_heteroclitus
ENSHCOG00000015208	rsl1d1	88	55.806	ENSGMOG00000013048	rsl1d1	88	63.454	Gadus_morhua
ENSHCOG00000015208	rsl1d1	85	44.654	ENSGALG00000033690	RSL1D1	55	52.479	Gallus_gallus
ENSHCOG00000015208	rsl1d1	88	55.623	ENSGAFG00000020794	rsl1d1	82	58.991	Gambusia_affinis
ENSHCOG00000015208	rsl1d1	86	58.224	ENSGACG00000004483	rsl1d1	83	56.250	Gasterosteus_aculeatus
ENSHCOG00000015208	rsl1d1	86	64.052	ENSHBUG00000001551	rsl1d1	85	63.636	Haplochromis_burtoni
ENSHCOG00000015208	rsl1d1	69	45.267	ENSHGLG00000006774	RSL1D1	55	45.267	Heterocephalus_glaber_female
ENSHCOG00000015208	rsl1d1	69	45.267	ENSHGLG00100017781	RSL1D1	55	45.267	Heterocephalus_glaber_male
ENSHCOG00000015208	rsl1d1	90	54.630	ENSIPUG00000001677	rsl1d1	85	54.630	Ictalurus_punctatus
ENSHCOG00000015208	rsl1d1	89	35.632	ENSJJAG00000012115	Rsl1d1	52	41.152	Jaculus_jaculus
ENSHCOG00000015208	rsl1d1	69	69.008	ENSKMAG00000021908	rsl1d1	84	60.726	Kryptolebias_marmoratus
ENSHCOG00000015208	rsl1d1	88	60.323	ENSLBEG00000001076	rsl1d1	89	59.568	Labrus_bergylta
ENSHCOG00000015208	rsl1d1	88	53.074	ENSLOCG00000007416	rsl1d1	78	49.555	Lepisosteus_oculatus
ENSHCOG00000015208	rsl1d1	89	37.571	ENSLAFG00000013664	RSL1D1	51	43.388	Loxodonta_africana
ENSHCOG00000015208	rsl1d1	67	44.304	ENSMMUG00000019632	RSL1D1	99	47.771	Macaca_mulatta
ENSHCOG00000015208	rsl1d1	89	61.890	ENSMAMG00000004385	rsl1d1	88	60.366	Mastacembelus_armatus
ENSHCOG00000015208	rsl1d1	86	65.049	ENSMZEG00005007150	rsl1d1	86	63.754	Maylandia_zebra
ENSHCOG00000015208	rsl1d1	83	43.865	ENSMGAG00000000863	RSL1D1	54	52.321	Meleagris_gallopavo
ENSHCOG00000015208	rsl1d1	85	37.576	ENSMOCG00000017724	Rsl1d1	55	44.770	Microtus_ochrogaster
ENSHCOG00000015208	rsl1d1	85	55.853	ENSMMOG00000003730	rsl1d1	79	63.291	Mola_mola
ENSHCOG00000015208	rsl1d1	83	41.667	ENSMODG00000004625	-	52	49.789	Monodelphis_domestica
ENSHCOG00000015208	rsl1d1	71	43.373	ENSMODG00000029494	-	55	44.304	Monodelphis_domestica
ENSHCOG00000015208	rsl1d1	75	67.547	ENSMALG00000009531	rsl1d1	88	61.468	Monopterus_albus
ENSHCOG00000015208	rsl1d1	68	43.515	ENSMUSG00000005846	Rsl1d1	53	43.515	Mus_musculus
ENSHCOG00000015208	rsl1d1	68	43.515	MGP_PahariEiJ_G0016164	Rsl1d1	53	43.515	Mus_pahari
ENSHCOG00000015208	rsl1d1	68	43.933	MGP_SPRETEiJ_G0021352	Rsl1d1	53	43.933	Mus_spretus
ENSHCOG00000015208	rsl1d1	68	41.423	ENSNGAG00000009086	-	52	41.423	Nannospalax_galili
ENSHCOG00000015208	rsl1d1	68	40.167	ENSNGAG00000013578	-	53	40.167	Nannospalax_galili
ENSHCOG00000015208	rsl1d1	85	63.043	ENSNBRG00000002777	rsl1d1	86	62.540	Neolamprologus_brichardi
ENSHCOG00000015208	rsl1d1	67	43.882	ENSNLEG00000012149	-	62	43.882	Nomascus_leucogenys
ENSHCOG00000015208	rsl1d1	90	40.476	ENSOPRG00000004442	-	52	47.257	Ochotona_princeps
ENSHCOG00000015208	rsl1d1	85	64.725	ENSONIG00000019757	rsl1d1	89	62.939	Oreochromis_niloticus
ENSHCOG00000015208	rsl1d1	61	49.537	ENSOANG00000009408	-	51	49.537	Ornithorhynchus_anatinus
ENSHCOG00000015208	rsl1d1	69	44.033	ENSOCUG00000004751	RSL1D1	52	44.033	Oryctolagus_cuniculus
ENSHCOG00000015208	rsl1d1	99	57.382	ENSORLG00000002877	rsl1d1	100	56.825	Oryzias_latipes
ENSHCOG00000015208	rsl1d1	99	56.825	ENSORLG00020006636	rsl1d1	100	56.825	Oryzias_latipes_hni
ENSHCOG00000015208	rsl1d1	99	57.103	ENSORLG00015005427	rsl1d1	100	57.103	Oryzias_latipes_hsok
ENSHCOG00000015208	rsl1d1	88	60.772	ENSOMEG00000008036	rsl1d1	83	58.280	Oryzias_melastigma
ENSHCOG00000015208	rsl1d1	77	41.912	ENSOGAG00000015151	RSL1D1	53	41.912	Otolemur_garnettii
ENSHCOG00000015208	rsl1d1	88	49.518	ENSPKIG00000022687	rsl1d1	85	46.866	Paramormyrops_kingsleyae
ENSHCOG00000015208	rsl1d1	91	41.436	ENSPSIG00000011642	RSL1D1	71	42.090	Pelodiscus_sinensis
ENSHCOG00000015208	rsl1d1	84	61.000	ENSPMGG00000022261	rsl1d1	99	60.667	Periophthalmus_magnuspinnatus
ENSHCOG00000015208	rsl1d1	88	37.356	ENSPEMG00000009523	Rsl1d1	53	43.515	Peromyscus_maniculatus_bairdii
ENSHCOG00000015208	rsl1d1	86	45.928	ENSPCIG00000026851	-	62	49.597	Phascolarctos_cinereus
ENSHCOG00000015208	rsl1d1	85	53.571	ENSPFOG00000005017	rsl1d1	67	64.609	Poecilia_formosa
ENSHCOG00000015208	rsl1d1	86	57.237	ENSPLAG00000000482	rsl1d1	72	56.908	Poecilia_latipinna
ENSHCOG00000015208	rsl1d1	98	52.571	ENSPMEG00000007032	rsl1d1	94	52.286	Poecilia_mexicana
ENSHCOG00000015208	rsl1d1	96	51.445	ENSPREG00000016619	rsl1d1	88	52.478	Poecilia_reticulata
ENSHCOG00000015208	rsl1d1	72	39.062	ENSPPYG00000019335	-	54	40.167	Pongo_abelii
ENSHCOG00000015208	rsl1d1	67	40.928	ENSPCOG00000022456	RSL1D1	66	38.489	Propithecus_coquereli
ENSHCOG00000015208	rsl1d1	87	36.338	ENSPVAG00000005014	RSL1D1	50	44.304	Pteropus_vampyrus
ENSHCOG00000015208	rsl1d1	86	61.231	ENSPNYG00000002850	rsl1d1	85	62.701	Pundamilia_nyererei
ENSHCOG00000015208	rsl1d1	87	53.438	ENSPNAG00000011848	rsl1d1	66	62.195	Pygocentrus_nattereri
ENSHCOG00000015208	rsl1d1	89	52.960	ENSSFOG00015011354	rsl1d1	71	60.887	Scleropages_formosus
ENSHCOG00000015208	rsl1d1	83	63.140	ENSSMAG00000007957	rsl1d1	91	59.215	Scophthalmus_maximus
ENSHCOG00000015208	rsl1d1	87	60.383	ENSSDUG00000008447	rsl1d1	80	60.692	Seriola_dumerili
ENSHCOG00000015208	rsl1d1	87	59.744	ENSSLDG00000008293	rsl1d1	86	60.377	Seriola_lalandi_dorsalis
ENSHCOG00000015208	rsl1d1	85	43.210	ENSSPUG00000007525	RSL1D1	53	51.037	Sphenodon_punctatus
ENSHCOG00000015208	rsl1d1	71	70.281	ENSSPAG00000009755	rsl1d1	87	61.538	Stegastes_partitus
ENSHCOG00000015208	rsl1d1	69	52.893	ENSTGUG00000005174	RSL1D1	98	52.893	Taeniopygia_guttata
ENSHCOG00000015208	rsl1d1	85	59.744	ENSTRUG00000016970	rsl1d1	88	59.190	Takifugu_rubripes
ENSHCOG00000015208	rsl1d1	86	60.131	ENSTNIG00000012925	rsl1d1	85	60.131	Tetraodon_nigroviridis
ENSHCOG00000015208	rsl1d1	68	45.188	ENSTTRG00000011629	RSL1D1	50	45.188	Tursiops_truncatus
ENSHCOG00000015208	rsl1d1	84	39.818	ENSUAMG00000004470	RSL1D1	52	44.878	Ursus_americanus
ENSHCOG00000015208	rsl1d1	86	45.938	ENSXETG00000033365	-	56	51.220	Xenopus_tropicalis
ENSHCOG00000015208	rsl1d1	69	68.790	ENSXCOG00000003117	rsl1d1	98	71.622	Xiphophorus_couchianus
ENSHCOG00000015208	rsl1d1	68	68.067	ENSXMAG00000025111	rsl1d1	68	68.067	Xiphophorus_maculatus