EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015277 (Gene tree)
Gene ID: -
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N(6)-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2463 bases
Position: chrKV880428.1:291274-293736
Accession: ZDB-GENE-030131-6123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012237	YTH	PF04146.15	6.9e-39	1	1
ENSHCOP00000025241	YTH	PF04146.15	6.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019193	-	1710	-	ENSHCOP00000012237	569 (aa)	-	-
ENSHCOT00000019218	-	1689	-	ENSHCOP00000025241	562 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000015277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015277	ythdf3	95	58.389	ENSHCOG00000015814	ythdf2	95	58.333
ENSHCOG00000015277	ythdf3	96	55.665	ENSHCOG00000008866	ythdf1	96	55.207
ENSHCOG00000015277	ythdf3	97	57.213	ENSHCOG00000011303	YTHDF1	100	55.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015277	ythdf3	99	82.558	ENSAPOG00000024006	ythdf3	100	85.911	Acanthochromis_polyacanthus
ENSHCOG00000015277	ythdf3	99	82.226	ENSAOCG00000000723	ythdf3	99	85.714	Amphiprion_ocellaris
ENSHCOG00000015277	ythdf3	99	82.060	ENSAPEG00000020352	ythdf3	99	85.546	Amphiprion_percula
ENSHCOG00000015277	ythdf3	98	74.054	ENSATEG00000011478	ythdf3	98	96.500	Anabas_testudineus
ENSHCOG00000015277	ythdf3	97	70.915	ENSAMXG00000030366	ythdf3	99	76.759	Astyanax_mexicanus
ENSHCOG00000015277	ythdf3	64	49.866	ENSCGRG00000008289	-	99	49.114	Cricetulus_griseus_crigri
ENSHCOG00000015277	ythdf3	96	70.578	ENSCGRG00000005613	-	99	70.715	Cricetulus_griseus_crigri
ENSHCOG00000015277	ythdf3	99	84.193	ENSCSEG00000014861	ythdf3	99	85.329	Cynoglossus_semilaevis
ENSHCOG00000015277	ythdf3	99	81.833	ENSCVAG00000018114	ythdf3	99	82.462	Cyprinodon_variegatus
ENSHCOG00000015277	ythdf3	95	76.117	ENSDARG00000057939	ythdf3	99	77.090	Danio_rerio
ENSHCOG00000015277	ythdf3	95	77.665	ENSELUG00000014824	ythdf3	99	78.053	Esox_lucius
ENSHCOG00000015277	ythdf3	99	82.558	ENSFHEG00000016395	ythdf3	99	83.193	Fundulus_heteroclitus
ENSHCOG00000015277	ythdf3	95	76.696	ENSGMOG00000014950	ythdf3	98	74.875	Gadus_morhua
ENSHCOG00000015277	ythdf3	99	82.890	ENSGAFG00000006529	ythdf3	99	83.361	Gambusia_affinis
ENSHCOG00000015277	ythdf3	99	83.250	ENSGACG00000002998	ythdf3	99	84.237	Gasterosteus_aculeatus
ENSHCOG00000015277	ythdf3	95	73.175	ENSIPUG00000014157	YTHDF1	99	75.581	Ictalurus_punctatus
ENSHCOG00000015277	ythdf3	99	80.826	ENSKMAG00000008447	ythdf3	99	82.943	Kryptolebias_marmoratus
ENSHCOG00000015277	ythdf3	98	82.384	ENSMAMG00000000414	ythdf3	99	80.783	Mastacembelus_armatus
ENSHCOG00000015277	ythdf3	95	74.216	ENSMMOG00000003402	ythdf3	98	73.217	Mola_mola
ENSHCOG00000015277	ythdf3	98	76.481	ENSMALG00000000147	ythdf3	99	84.706	Monopterus_albus
ENSHCOG00000015277	ythdf3	96	70.051	MGP_SPRETEiJ_G0025794	Ythdf3	99	70.115	Mus_spretus
ENSHCOG00000015277	ythdf3	82	95.434	ENSNBRG00000023433	ythdf3	99	84.138	Neolamprologus_brichardi
ENSHCOG00000015277	ythdf3	95	70.890	ENSOANG00000005053	YTHDF3	99	72.379	Ornithorhynchus_anatinus
ENSHCOG00000015277	ythdf3	99	82.030	ENSORLG00000008640	ythdf3	99	82.492	Oryzias_latipes
ENSHCOG00000015277	ythdf3	98	82.492	ENSORLG00020014684	ythdf3	99	82.155	Oryzias_latipes_hni
ENSHCOG00000015277	ythdf3	99	81.864	ENSORLG00015014880	ythdf3	99	82.323	Oryzias_latipes_hsok
ENSHCOG00000015277	ythdf3	99	82.529	ENSOMEG00000008212	ythdf3	99	83.838	Oryzias_melastigma
ENSHCOG00000015277	ythdf3	96	71.672	ENSPKIG00000008298	ythdf3	99	75.124	Paramormyrops_kingsleyae
ENSHCOG00000015277	ythdf3	96	76.817	ENSPMGG00000023791	ythdf3	98	76.897	Periophthalmus_magnuspinnatus
ENSHCOG00000015277	ythdf3	99	82.724	ENSPFOG00000006082	ythdf3	99	83.193	Poecilia_formosa
ENSHCOG00000015277	ythdf3	99	82.890	ENSPLAG00000006902	ythdf3	99	83.361	Poecilia_latipinna
ENSHCOG00000015277	ythdf3	99	82.724	ENSPMEG00000012922	ythdf3	99	83.193	Poecilia_mexicana
ENSHCOG00000015277	ythdf3	99	81.426	ENSPREG00000019781	ythdf3	99	83.054	Poecilia_reticulata
ENSHCOG00000015277	ythdf3	52	87.234	ENSPPYG00000018626	YTHDF3	99	53.682	Pongo_abelii
ENSHCOG00000015277	ythdf3	79	93.617	ENSPVAG00000002740	YTHDF3	86	93.617	Pteropus_vampyrus
ENSHCOG00000015277	ythdf3	83	95.434	ENSPNYG00000002949	ythdf3	99	83.527	Pundamilia_nyererei
ENSHCOG00000015277	ythdf3	80	89.862	ENSSFOG00015015445	ythdf3	97	70.764	Scleropages_formosus
ENSHCOG00000015277	ythdf3	99	81.788	ENSSMAG00000014999	ythdf3	99	83.362	Scophthalmus_maximus
ENSHCOG00000015277	ythdf3	82	95.890	ENSSDUG00000014403	ythdf3	99	85.546	Seriola_dumerili
ENSHCOG00000015277	ythdf3	84	94.977	ENSSPAG00000001269	ythdf3	99	83.940	Stegastes_partitus
ENSHCOG00000015277	ythdf3	98	82.245	ENSTRUG00000007870	ythdf3	99	82.580	Takifugu_rubripes
ENSHCOG00000015277	ythdf3	99	80.268	ENSTNIG00000012698	ythdf3	99	81.049	Tetraodon_nigroviridis
ENSHCOG00000015277	ythdf3	71	87.281	ENSVPAG00000008104	YTHDF3	87	85.246	Vicugna_pacos
ENSHCOG00000015277	ythdf3	96	69.257	ENSXETG00000021659	ythdf3	99	70.115	Xenopus_tropicalis
ENSHCOG00000015277	ythdf3	98	80.405	ENSXCOG00000009687	ythdf3	99	79.764	Xiphophorus_couchianus
ENSHCOG00000015277	ythdf3	99	82.060	ENSXMAG00000009698	ythdf3	99	82.689	Xiphophorus_maculatus