EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015348 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 17927 bases
Position: chrKV879861.1:30022-47948
Accession: 109513498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012301	ResIII	PF04851.15	1.7e-07	1	1
ENSHCOP00000012301	BRK	PF07533.16	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026878	-	3981	XM_019866002	ENSHCOP00000012301	1326 (aa)	XP_019721561	-

Gene Model

Click here to download ENSHCOG00000015348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015348	-	88	77.994	ENSHCOG00000009510	smarca4a	79	78.384

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015348	-	88	86.733	ENSG00000080503	SMARCA2	93	98.000	Homo_sapiens
ENSHCOG00000015348	-	100	84.311	ENSAPOG00000002641	SMARCA2	100	84.813	Acanthochromis_polyacanthus
ENSHCOG00000015348	-	88	83.301	ENSAMEG00000012325	SMARCA2	91	83.877	Ailuropoda_melanoleuca
ENSHCOG00000015348	-	100	82.470	ENSACIG00000015607	SMARCA2	89	82.470	Amphilophus_citrinellus
ENSHCOG00000015348	-	95	88.075	ENSAOCG00000009647	-	90	83.297	Amphiprion_ocellaris
ENSHCOG00000015348	-	100	83.735	ENSAPEG00000007646	SMARCA2	99	84.318	Amphiprion_percula
ENSHCOG00000015348	-	95	89.296	ENSATEG00000006916	SMARCA2	89	81.876	Anabas_testudineus
ENSHCOG00000015348	-	97	72.820	ENSAPLG00000013873	SMARCA2	93	73.042	Anas_platyrhynchos
ENSHCOG00000015348	-	95	72.231	ENSACAG00000002423	SMARCA2	89	73.845	Anolis_carolinensis
ENSHCOG00000015348	-	88	86.733	ENSANAG00000026498	SMARCA2	98	74.145	Aotus_nancymaae
ENSHCOG00000015348	-	100	82.948	ENSACLG00000004248	SMARCA2	89	83.960	Astatotilapia_calliptera
ENSHCOG00000015348	-	96	88.911	ENSAMXG00000012404	smarca2	82	89.208	Astyanax_mexicanus
ENSHCOG00000015348	-	88	86.746	ENSBTAG00000007494	SMARCA2	89	76.204	Bos_taurus
ENSHCOG00000015348	-	88	86.733	ENSCJAG00000010710	SMARCA2	99	74.929	Callithrix_jacchus
ENSHCOG00000015348	-	88	86.337	ENSCAFG00000002013	SMARCA2	89	75.934	Canis_familiaris
ENSHCOG00000015348	-	74	86.391	ENSCAFG00020026802	SMARCA2	81	86.290	Canis_lupus_dingo
ENSHCOG00000015348	-	88	86.238	ENSCHIG00000025863	SMARCA2	89	76.204	Capra_hircus
ENSHCOG00000015348	-	88	86.733	ENSTSYG00000003858	SMARCA2	91	74.384	Carlito_syrichta
ENSHCOG00000015348	-	88	86.318	ENSCAPG00000002890	SMARCA2	89	74.280	Cavia_aperea
ENSHCOG00000015348	-	88	86.746	ENSCPOG00000005475	SMARCA2	89	75.142	Cavia_porcellus
ENSHCOG00000015348	-	88	86.733	ENSCCAG00000030636	SMARCA2	98	74.591	Cebus_capucinus
ENSHCOG00000015348	-	88	86.647	ENSCATG00000031470	SMARCA2	99	74.964	Cercocebus_atys
ENSHCOG00000015348	-	74	86.647	ENSCLAG00000014484	SMARCA2	89	74.805	Chinchilla_lanigera
ENSHCOG00000015348	-	88	86.449	ENSCSAG00000008650	SMARCA2	95	74.982	Chlorocebus_sabaeus
ENSHCOG00000015348	-	65	85.340	ENSCHOG00000004316	SMARCA2	79	82.467	Choloepus_hoffmanni
ENSHCOG00000015348	-	88	85.686	ENSCPBG00000025463	SMARCA2	80	85.968	Chrysemys_picta_bellii
ENSHCOG00000015348	-	88	86.733	ENSCANG00000039597	SMARCA2	98	75.464	Colobus_angolensis_palliatus
ENSHCOG00000015348	-	88	81.188	ENSCGRG00001002323	Smarca2	89	71.480	Cricetulus_griseus_chok1gshd
ENSHCOG00000015348	-	91	88.956	ENSCSEG00000019311	SMARCA2	89	79.422	Cynoglossus_semilaevis
ENSHCOG00000015348	-	91	84.902	ENSCVAG00000016571	SMARCA2	98	81.046	Cyprinodon_variegatus
ENSHCOG00000015348	-	92	89.098	ENSDARG00000008904	smarca2	89	78.014	Danio_rerio
ENSHCOG00000015348	-	88	86.152	ENSDNOG00000006402	SMARCA2	89	67.805	Dasypus_novemcinctus
ENSHCOG00000015348	-	88	86.634	ENSDORG00000014832	Smarca2	89	75.053	Dipodomys_ordii
ENSHCOG00000015348	-	74	62.316	FBgn0000212	brm	60	63.591	Drosophila_melanogaster
ENSHCOG00000015348	-	74	64.849	ENSEBUG00000002449	-	86	58.272	Eptatretus_burgeri
ENSHCOG00000015348	-	99	67.829	ENSEBUG00000011442	-	93	68.318	Eptatretus_burgeri
ENSHCOG00000015348	-	88	86.647	ENSEASG00005010312	SMARCA2	89	75.664	Equus_asinus_asinus
ENSHCOG00000015348	-	56	82.432	ENSEEUG00000015540	-	51	82.432	Erinaceus_europaeus
ENSHCOG00000015348	-	88	89.676	ENSELUG00000010318	smarca2	85	85.125	Esox_lucius
ENSHCOG00000015348	-	88	86.337	ENSFCAG00000001568	SMARCA2	89	75.790	Felis_catus
ENSHCOG00000015348	-	86	86.067	ENSFALG00000010416	SMARCA2	78	85.856	Ficedula_albicollis
ENSHCOG00000015348	-	88	86.548	ENSFDAG00000010502	SMARCA2	77	86.535	Fukomys_damarensis
ENSHCOG00000015348	-	97	85.856	ENSFHEG00000021250	SMARCA2	89	82.636	Fundulus_heteroclitus
ENSHCOG00000015348	-	99	77.480	ENSGMOG00000014229	SMARCA2	90	76.824	Gadus_morhua
ENSHCOG00000015348	-	88	86.166	ENSGALG00000010164	SMARCA2	78	85.955	Gallus_gallus
ENSHCOG00000015348	-	92	83.202	ENSGAFG00000001164	SMARCA2	86	79.680	Gambusia_affinis
ENSHCOG00000015348	-	95	86.304	ENSGACG00000014488	SMARCA2	82	86.398	Gasterosteus_aculeatus
ENSHCOG00000015348	-	88	85.686	ENSGAGG00000024412	SMARCA2	89	74.591	Gopherus_agassizii
ENSHCOG00000015348	-	88	86.634	ENSGGOG00000000513	SMARCA2	82	86.548	Gorilla_gorilla
ENSHCOG00000015348	-	97	86.545	ENSHBUG00000006691	SMARCA2	88	83.778	Haplochromis_burtoni
ENSHCOG00000015348	-	74	86.733	ENSHGLG00000005215	SMARCA2	88	74.733	Heterocephalus_glaber_female
ENSHCOG00000015348	-	97	76.409	ENSHGLG00100010496	SMARCA2	89	76.014	Heterocephalus_glaber_male
ENSHCOG00000015348	-	91	88.713	ENSIPUG00000011060	smarca2	97	79.691	Ictalurus_punctatus
ENSHCOG00000015348	-	88	86.733	ENSSTOG00000006812	SMARCA2	78	86.548	Ictidomys_tridecemlineatus
ENSHCOG00000015348	-	74	86.436	ENSJJAG00000010867	Smarca2	89	74.627	Jaculus_jaculus
ENSHCOG00000015348	-	95	87.970	ENSKMAG00000015844	-	83	86.207	Kryptolebias_marmoratus
ENSHCOG00000015348	-	89	88.526	ENSLOCG00000011499	smarca2	77	88.713	Lepisosteus_oculatus
ENSHCOG00000015348	-	88	86.462	ENSLAFG00000014061	SMARCA2	89	74.524	Loxodonta_africana
ENSHCOG00000015348	-	88	86.733	ENSMFAG00000003814	SMARCA2	98	75.758	Macaca_fascicularis
ENSHCOG00000015348	-	88	86.733	ENSMMUG00000015279	SMARCA2	94	75.267	Macaca_mulatta
ENSHCOG00000015348	-	88	86.733	ENSMNEG00000041069	SMARCA2	99	75.054	Macaca_nemestrina
ENSHCOG00000015348	-	88	86.733	ENSMLEG00000027418	SMARCA2	99	76.215	Mandrillus_leucophaeus
ENSHCOG00000015348	-	95	88.826	ENSMAMG00000003056	SMARCA2	100	82.101	Mastacembelus_armatus
ENSHCOG00000015348	-	97	86.364	ENSMZEG00005020709	SMARCA2	88	83.887	Maylandia_zebra
ENSHCOG00000015348	-	75	64.865	ENSMGAG00000005160	-	84	67.556	Meleagris_gallopavo
ENSHCOG00000015348	-	88	86.733	ENSMICG00000005162	SMARCA2	99	74.910	Microcebus_murinus
ENSHCOG00000015348	-	74	86.733	ENSMOCG00000001611	Smarca2	89	74.574	Microtus_ochrogaster
ENSHCOG00000015348	-	98	87.032	ENSMMOG00000014196	SMARCA2	91	82.531	Mola_mola
ENSHCOG00000015348	-	86	85.856	ENSMODG00000003578	SMARCA2	78	86.139	Monodelphis_domestica
ENSHCOG00000015348	-	95	88.297	ENSMALG00000009611	SMARCA2	89	83.163	Monopterus_albus
ENSHCOG00000015348	-	88	86.535	MGP_CAROLIEiJ_G0022841	Smarca2	81	86.337	Mus_caroli
ENSHCOG00000015348	-	74	86.535	ENSMUSG00000024921	Smarca2	93	98.000	Mus_musculus
ENSHCOG00000015348	-	74	86.040	MGP_PahariEiJ_G0014334	Smarca2	67	86.337	Mus_pahari
ENSHCOG00000015348	-	74	86.436	MGP_SPRETEiJ_G0023759	Smarca2	81	86.436	Mus_spretus
ENSHCOG00000015348	-	74	86.139	ENSMPUG00000005171	SMARCA2	74	86.436	Mustela_putorius_furo
ENSHCOG00000015348	-	88	81.256	ENSMLUG00000002342	SMARCA2	64	81.023	Myotis_lucifugus
ENSHCOG00000015348	-	74	85.644	ENSNGAG00000000108	Smarca2	88	74.714	Nannospalax_galili
ENSHCOG00000015348	-	94	73.455	ENSNBRG00000017998	SMARCA2	94	83.582	Neolamprologus_brichardi
ENSHCOG00000015348	-	88	85.644	ENSNLEG00000008575	SMARCA2	98	75.564	Nomascus_leucogenys
ENSHCOG00000015348	-	97	70.936	ENSMEUG00000009812	SMARCA2	88	71.480	Notamacropus_eugenii
ENSHCOG00000015348	-	74	80.218	ENSOPRG00000013474	SMARCA2	89	70.297	Ochotona_princeps
ENSHCOG00000015348	-	74	86.634	ENSODEG00000005452	SMARCA2	64	86.647	Octodon_degus
ENSHCOG00000015348	-	97	86.945	ENSONIG00000014163	SMARCA2	83	87.217	Oreochromis_niloticus
ENSHCOG00000015348	-	55	84.321	ENSOANG00000008299	-	95	86.253	Ornithorhynchus_anatinus
ENSHCOG00000015348	-	74	86.647	ENSOCUG00000006320	SMARCA2	64	86.449	Oryctolagus_cuniculus
ENSHCOG00000015348	-	95	87.700	ENSORLG00000020820	SMARCA2	100	82.353	Oryzias_latipes
ENSHCOG00000015348	-	95	87.606	ENSORLG00015006289	SMARCA2	99	82.119	Oryzias_latipes_hsok
ENSHCOG00000015348	-	95	87.594	ENSOMEG00000009736	-	93	82.400	Oryzias_melastigma
ENSHCOG00000015348	-	88	86.449	ENSOGAG00000017053	SMARCA2	89	73.916	Otolemur_garnettii
ENSHCOG00000015348	-	88	86.462	ENSOARG00000013265	SMARCA2	89	75.554	Ovis_aries
ENSHCOG00000015348	-	88	86.634	ENSPPAG00000038717	SMARCA2	98	75.994	Pan_paniscus
ENSHCOG00000015348	-	88	86.436	ENSPPRG00000001879	SMARCA2	89	75.862	Panthera_pardus
ENSHCOG00000015348	-	88	86.733	ENSPTRG00000051168	SMARCA2	98	75.573	Pan_troglodytes
ENSHCOG00000015348	-	74	85.371	ENSPANG00000025121	SMARCA2	89	74.783	Papio_anubis
ENSHCOG00000015348	-	100	80.117	ENSPKIG00000018469	-	89	80.117	Paramormyrops_kingsleyae
ENSHCOG00000015348	-	86	85.108	ENSPSIG00000006284	SMARCA2	79	85.489	Pelodiscus_sinensis
ENSHCOG00000015348	-	100	78.145	ENSPMGG00000013696	-	91	78.890	Periophthalmus_magnuspinnatus
ENSHCOG00000015348	-	88	85.743	ENSPEMG00000019821	Smarca2	77	85.644	Peromyscus_maniculatus_bairdii
ENSHCOG00000015348	-	51	77.606	ENSPMAG00000001030	-	100	78.310	Petromyzon_marinus
ENSHCOG00000015348	-	90	76.321	ENSPMAG00000005337	-	90	65.730	Petromyzon_marinus
ENSHCOG00000015348	-	97	75.823	ENSPCIG00000015658	SMARCA2	89	76.070	Phascolarctos_cinereus
ENSHCOG00000015348	-	97	85.430	ENSPFOG00000001856	SMARCA2	90	80.856	Poecilia_formosa
ENSHCOG00000015348	-	97	85.430	ENSPLAG00000017829	SMARCA2	88	81.246	Poecilia_latipinna
ENSHCOG00000015348	-	97	85.339	ENSPMEG00000001815	-	90	80.614	Poecilia_mexicana
ENSHCOG00000015348	-	97	85.520	ENSPREG00000013800	SMARCA2	92	80.139	Poecilia_reticulata
ENSHCOG00000015348	-	74	86.449	ENSPPYG00000019258	SMARCA2	89	75.196	Pongo_abelii
ENSHCOG00000015348	-	63	73.980	ENSPCAG00000016969	SMARCA2	57	74.745	Procavia_capensis
ENSHCOG00000015348	-	88	83.861	ENSPCOG00000025709	SMARCA2	99	73.420	Propithecus_coquereli
ENSHCOG00000015348	-	79	86.859	ENSPVAG00000000901	SMARCA2	82	76.090	Pteropus_vampyrus
ENSHCOG00000015348	-	97	83.563	ENSPNYG00000004533	SMARCA2	89	79.744	Pundamilia_nyererei
ENSHCOG00000015348	-	96	89.406	ENSPNAG00000014635	smarca2	81	89.901	Pygocentrus_nattereri
ENSHCOG00000015348	-	74	86.436	ENSRNOG00000011931	Smarca2	82	86.238	Rattus_norvegicus
ENSHCOG00000015348	-	97	72.666	ENSRBIG00000038618	SMARCA2	99	76.211	Rhinopithecus_bieti
ENSHCOG00000015348	-	74	86.733	ENSRROG00000019271	SMARCA2	99	75.430	Rhinopithecus_roxellana
ENSHCOG00000015348	-	88	86.647	ENSSBOG00000034827	SMARCA2	79	86.449	Saimiri_boliviensis_boliviensis
ENSHCOG00000015348	-	88	85.757	ENSSHAG00000007884	SMARCA2	79	86.053	Sarcophilus_harrisii
ENSHCOG00000015348	-	100	79.942	ENSSFOG00015014870	SMARCA2	97	80.087	Scleropages_formosus
ENSHCOG00000015348	-	95	88.454	ENSSMAG00000013707	SMARCA2	89	82.634	Scophthalmus_maximus
ENSHCOG00000015348	-	95	89.714	ENSSDUG00000008852	-	89	83.417	Seriola_dumerili
ENSHCOG00000015348	-	95	88.921	ENSSLDG00000025449	SMARCA2	89	82.531	Seriola_lalandi_dorsalis
ENSHCOG00000015348	-	79	84.647	ENSSARG00000007888	SMARCA2	77	84.359	Sorex_araneus
ENSHCOG00000015348	-	87	85.094	ENSSPUG00000001629	SMARCA2	78	85.178	Sphenodon_punctatus
ENSHCOG00000015348	-	95	88.075	ENSSPAG00000020091	-	92	83.066	Stegastes_partitus
ENSHCOG00000015348	-	74	86.733	ENSSSCG00000005232	SMARCA2	89	75.917	Sus_scrofa
ENSHCOG00000015348	-	86	85.968	ENSTGUG00000005460	SMARCA2	78	86.053	Taeniopygia_guttata
ENSHCOG00000015348	-	100	80.984	ENSTRUG00000015619	SMARCA2	89	81.278	Takifugu_rubripes
ENSHCOG00000015348	-	65	85.091	ENSTBEG00000008767	SMARCA2	63	86.305	Tupaia_belangeri
ENSHCOG00000015348	-	88	86.647	ENSTTRG00000002033	SMARCA2	88	75.971	Tursiops_truncatus
ENSHCOG00000015348	-	88	86.337	ENSUAMG00000024701	SMARCA2	99	77.053	Ursus_americanus
ENSHCOG00000015348	-	85	77.525	ENSVPAG00000001204	SMARCA2	79	77.525	Vicugna_pacos
ENSHCOG00000015348	-	74	87.399	ENSVVUG00000004598	SMARCA2	84	87.298	Vulpes_vulpes
ENSHCOG00000015348	-	98	77.748	ENSXETG00000015299	smarca2	89	68.145	Xenopus_tropicalis
ENSHCOG00000015348	-	100	80.302	ENSXCOG00000011073	SMARCA2	99	81.155	Xiphophorus_couchianus
ENSHCOG00000015348	-	97	85.339	ENSXMAG00000015611	SMARCA2	84	85.701	Xiphophorus_maculatus