EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015358 (Gene tree)
Gene ID: 109530961
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1638 bases
Position: chrKV880428.1:41989-43626
Accession: 109530961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012356	RRS1	PF04939.12	4.9e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019365	-	1245	XM_019894933	ENSHCOP00000012356	360 (aa)	XP_019750492	UPI00094E3B6C

Gene Model

Click here to download ENSHCOG00000015358's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015358's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015358	rrs1	85	67.097	ENSG00000179041	RRS1	97	62.570	Homo_sapiens
ENSHCOG00000015358	rrs1	89	76.176	ENSATEG00000011743	rrs1	95	76.331	Anabas_testudineus
ENSHCOG00000015358	rrs1	98	60.598	ENSANAG00000018116	RRS1	97	62.849	Aotus_nancymaae
ENSHCOG00000015358	rrs1	88	68.889	ENSAMXG00000037893	rrs1	90	66.282	Astyanax_mexicanus
ENSHCOG00000015358	rrs1	94	60.894	ENSBTAG00000016716	RRS1	98	61.732	Bos_taurus
ENSHCOG00000015358	rrs1	74	42.391	WBGene00007617	rrbs-1	97	41.265	Caenorhabditis_elegans
ENSHCOG00000015358	rrs1	98	61.475	ENSCJAG00000022034	RRS1	97	62.570	Callithrix_jacchus
ENSHCOG00000015358	rrs1	84	67.101	ENSCAFG00000007313	RRS1	98	62.396	Canis_familiaris
ENSHCOG00000015358	rrs1	84	67.101	ENSCAFG00020020365	-	98	62.396	Canis_lupus_dingo
ENSHCOG00000015358	rrs1	84	67.101	ENSCAFG00020016049	-	98	62.396	Canis_lupus_dingo
ENSHCOG00000015358	rrs1	85	66.129	ENSCHIG00000009141	RRS1	98	61.453	Capra_hircus
ENSHCOG00000015358	rrs1	82	68.687	ENSCPOG00000000647	RRS1	98	64.426	Cavia_porcellus
ENSHCOG00000015358	rrs1	98	60.929	ENSCCAG00000032186	RRS1	97	63.128	Cebus_capucinus
ENSHCOG00000015358	rrs1	85	67.419	ENSCATG00000016944	RRS1	99	61.773	Cercocebus_atys
ENSHCOG00000015358	rrs1	85	67.097	ENSCSAG00000018552	RRS1	90	63.343	Chlorocebus_sabaeus
ENSHCOG00000015358	rrs1	85	68.065	ENSCHOG00000002455	RRS1	99	62.881	Choloepus_hoffmanni
ENSHCOG00000015358	rrs1	88	58.385	ENSCPBG00000021374	RRS1	99	56.461	Chrysemys_picta_bellii
ENSHCOG00000015358	rrs1	93	51.479	ENSCING00000002177	-	98	51.479	Ciona_intestinalis
ENSHCOG00000015358	rrs1	94	49.558	ENSCSAVG00000011819	-	98	49.558	Ciona_savignyi
ENSHCOG00000015358	rrs1	86	67.197	ENSCANG00000012718	RRS1	97	63.128	Colobus_angolensis_palliatus
ENSHCOG00000015358	rrs1	97	63.037	ENSCGRG00001002391	-	94	63.037	Cricetulus_griseus_chok1gshd
ENSHCOG00000015358	rrs1	93	63.690	ENSCGRG00001015575	-	95	63.690	Cricetulus_griseus_chok1gshd
ENSHCOG00000015358	rrs1	84	66.113	ENSCSEG00000014750	rrs1	99	63.056	Cynoglossus_semilaevis
ENSHCOG00000015358	rrs1	84	64.784	ENSCVAG00000017878	rrs1	99	61.919	Cyprinodon_variegatus
ENSHCOG00000015358	rrs1	84	75.248	ENSDARG00000003941	rrs1	97	72.485	Danio_rerio
ENSHCOG00000015358	rrs1	85	67.742	ENSDNOG00000017900	RRS1	95	62.745	Dasypus_novemcinctus
ENSHCOG00000015358	rrs1	61	66.063	ENSDORG00000026331	Rrs1	94	59.438	Dipodomys_ordii
ENSHCOG00000015358	rrs1	93	44.706	FBgn0052409	CG32409	99	44.538	Drosophila_melanogaster
ENSHCOG00000015358	rrs1	55	68.020	ENSETEG00000000935	-	54	68.020	Echinops_telfairi
ENSHCOG00000015358	rrs1	86	55.161	ENSEBUG00000013506	rrs1	96	57.785	Eptatretus_burgeri
ENSHCOG00000015358	rrs1	85	67.742	ENSEASG00005001691	RRS1	99	62.327	Equus_asinus_asinus
ENSHCOG00000015358	rrs1	94	63.824	ENSECAG00000004492	RRS1	98	63.824	Equus_caballus
ENSHCOG00000015358	rrs1	87	66.454	ENSEEUG00000013719	RRS1	99	61.496	Erinaceus_europaeus
ENSHCOG00000015358	rrs1	84	67.427	ENSFCAG00000014332	RRS1	99	61.773	Felis_catus
ENSHCOG00000015358	rrs1	89	56.061	ENSGALG00000030890	RRS1	98	54.775	Gallus_gallus
ENSHCOG00000015358	rrs1	83	73.000	ENSGACG00000002969	rrs1	96	68.876	Gasterosteus_aculeatus
ENSHCOG00000015358	rrs1	88	58.696	ENSGAGG00000023718	RRS1	97	55.587	Gopherus_agassizii
ENSHCOG00000015358	rrs1	85	67.742	ENSGGOG00000026663	RRS1	97	63.128	Gorilla_gorilla
ENSHCOG00000015358	rrs1	93	63.609	ENSHGLG00000021423	RRS1	97	62.185	Heterocephalus_glaber_female
ENSHCOG00000015358	rrs1	93	63.609	ENSHGLG00100020640	RRS1	97	62.185	Heterocephalus_glaber_male
ENSHCOG00000015358	rrs1	88	68.868	ENSIPUG00000014412	rrs1	99	66.292	Ictalurus_punctatus
ENSHCOG00000015358	rrs1	97	62.606	ENSSTOG00000026310	RRS1	99	62.327	Ictidomys_tridecemlineatus
ENSHCOG00000015358	rrs1	76	62.909	ENSJJAG00000020395	-	99	54.701	Jaculus_jaculus
ENSHCOG00000015358	rrs1	83	69.900	ENSJJAG00000011507	-	99	63.562	Jaculus_jaculus
ENSHCOG00000015358	rrs1	84	75.828	ENSKMAG00000008238	rrs1	98	70.893	Kryptolebias_marmoratus
ENSHCOG00000015358	rrs1	86	70.130	ENSLACG00000004058	RRS1	99	68.788	Latimeria_chalumnae
ENSHCOG00000015358	rrs1	87	72.930	ENSLOCG00000017812	rrs1	98	69.801	Lepisosteus_oculatus
ENSHCOG00000015358	rrs1	87	66.984	ENSLAFG00000015405	RRS1	99	62.259	Loxodonta_africana
ENSHCOG00000015358	rrs1	98	62.429	ENSMFAG00000042747	RRS1	97	62.570	Macaca_fascicularis
ENSHCOG00000015358	rrs1	98	62.429	ENSMMUG00000000886	RRS1	97	62.570	Macaca_mulatta
ENSHCOG00000015358	rrs1	98	62.429	ENSMNEG00000011696	RRS1	97	62.570	Macaca_nemestrina
ENSHCOG00000015358	rrs1	85	67.419	ENSMLEG00000004794	RRS1	99	61.773	Mandrillus_leucophaeus
ENSHCOG00000015358	rrs1	83	74.747	ENSMZEG00005004349	RRS1	94	71.176	Maylandia_zebra
ENSHCOG00000015358	rrs1	96	61.944	ENSMAUG00000005392	Rrs1	99	61.944	Mesocricetus_auratus
ENSHCOG00000015358	rrs1	96	63.866	ENSMOCG00000015862	Rrs1	92	63.866	Microtus_ochrogaster
ENSHCOG00000015358	rrs1	88	65.000	ENSMODG00000024952	RRS1	100	60.218	Monodelphis_domestica
ENSHCOG00000015358	rrs1	96	63.025	MGP_CAROLIEiJ_G0013936	Rrs1	99	62.465	Mus_caroli
ENSHCOG00000015358	rrs1	94	63.025	ENSMUSG00000061024	Rrs1	98	62.465	Mus_musculus
ENSHCOG00000015358	rrs1	93	62.908	MGP_PahariEiJ_G0023883	Rrs1	99	61.111	Mus_pahari
ENSHCOG00000015358	rrs1	96	62.500	MGP_SPRETEiJ_G0014739	Rrs1	99	61.944	Mus_spretus
ENSHCOG00000015358	rrs1	99	61.878	ENSMPUG00000018626	RRS1	96	61.878	Mustela_putorius_furo
ENSHCOG00000015358	rrs1	96	62.637	ENSNGAG00000012904	Rrs1	99	63.435	Nannospalax_galili
ENSHCOG00000015358	rrs1	78	62.544	ENSNLEG00000027730	RRS1	93	62.718	Nomascus_leucogenys
ENSHCOG00000015358	rrs1	83	75.758	ENSONIG00000014187	rrs1	94	73.313	Oreochromis_niloticus
ENSHCOG00000015358	rrs1	91	60.121	ENSOANG00000012348	RRS1	97	59.167	Ornithorhynchus_anatinus
ENSHCOG00000015358	rrs1	84	68.078	ENSOCUG00000013490	RRS1	92	62.606	Oryctolagus_cuniculus
ENSHCOG00000015358	rrs1	91	62.080	ENSOMEG00000008525	rrs1	99	61.690	Oryzias_melastigma
ENSHCOG00000015358	rrs1	96	62.466	ENSOGAG00000001085	RRS1	99	61.773	Otolemur_garnettii
ENSHCOG00000015358	rrs1	87	60.952	ENSOARG00000017417	RRS1	97	57.025	Ovis_aries
ENSHCOG00000015358	rrs1	85	67.419	ENSPPAG00000024378	RRS1	97	62.849	Pan_paniscus
ENSHCOG00000015358	rrs1	84	67.752	ENSPPRG00000021408	RRS1	99	62.050	Panthera_pardus
ENSHCOG00000015358	rrs1	85	67.097	ENSPTRG00000030988	RRS1	97	62.570	Pan_troglodytes
ENSHCOG00000015358	rrs1	96	46.409	ENSPANG00000035974	RRS1	99	46.797	Papio_anubis
ENSHCOG00000015358	rrs1	83	72.148	ENSPKIG00000007953	rrs1	99	68.300	Paramormyrops_kingsleyae
ENSHCOG00000015358	rrs1	93	64.881	ENSPEMG00000014427	Rrs1	99	62.707	Peromyscus_maniculatus_bairdii
ENSHCOG00000015358	rrs1	84	60.261	ENSPMAG00000006513	rrs1	94	56.056	Petromyzon_marinus
ENSHCOG00000015358	rrs1	82	66.667	ENSPCIG00000026695	RRS1	99	62.079	Phascolarctos_cinereus
ENSHCOG00000015358	rrs1	90	74.462	ENSPFOG00000020722	rrs1	99	76.074	Poecilia_formosa
ENSHCOG00000015358	rrs1	84	65.781	ENSPREG00000019960	rrs1	99	62.254	Poecilia_reticulata
ENSHCOG00000015358	rrs1	81	68.919	ENSPPYG00000018637	RRS1	99	68.919	Pongo_abelii
ENSHCOG00000015358	rrs1	94	63.824	ENSPCAG00000009115	RRS1	99	61.773	Procavia_capensis
ENSHCOG00000015358	rrs1	81	73.448	ENSPNAG00000021707	rrs1	99	68.820	Pygocentrus_nattereri
ENSHCOG00000015358	rrs1	96	60.942	ENSRNOG00000007240	Rrs1	99	61.496	Rattus_norvegicus
ENSHCOG00000015358	rrs1	85	67.097	ENSRBIG00000009132	RRS1	97	62.570	Rhinopithecus_bieti
ENSHCOG00000015358	rrs1	85	67.097	ENSRROG00000013472	RRS1	97	62.570	Rhinopithecus_roxellana
ENSHCOG00000015358	rrs1	96	63.429	ENSSBOG00000011006	-	99	63.920	Saimiri_boliviensis_boliviensis
ENSHCOG00000015358	rrs1	83	68.562	ENSSBOG00000012639	-	99	62.535	Saimiri_boliviensis_boliviensis
ENSHCOG00000015358	rrs1	81	58.219	ENSSFOG00015015772	rrs1	93	55.752	Scleropages_formosus
ENSHCOG00000015358	rrs1	97	73.184	ENSSMAG00000015226	rrs1	99	74.167	Scophthalmus_maximus
ENSHCOG00000015358	rrs1	85	50.645	ENSSARG00000006976	RRS1	80	69.298	Sorex_araneus
ENSHCOG00000015358	rrs1	96	61.708	ENSSSCG00000006214	RRS1	99	62.050	Sus_scrofa
ENSHCOG00000015358	rrs1	90	71.605	ENSTRUG00000008796	rrs1	96	71.084	Takifugu_rubripes
ENSHCOG00000015358	rrs1	83	75.758	ENSTNIG00000004026	rrs1	99	71.469	Tetraodon_nigroviridis
ENSHCOG00000015358	rrs1	85	67.742	ENSTBEG00000014752	RRS1	99	62.881	Tupaia_belangeri
ENSHCOG00000015358	rrs1	96	62.604	ENSUAMG00000008502	RRS1	99	62.604	Ursus_americanus
ENSHCOG00000015358	rrs1	84	67.101	ENSVVUG00000018452	RRS1	98	62.396	Vulpes_vulpes
ENSHCOG00000015358	rrs1	83	77.441	ENSXCOG00000009809	rrs1	99	72.676	Xiphophorus_couchianus