EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015538 (Gene tree)
Gene ID: 109516510
Gene Symbol: srsf2a
Alias: -
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 1425 bases
Position: chrKV879708.1:78285-79709
Accession: 109516510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012509	RRM_1	PF00076.22	5.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019565	-	781	XM_019871120	ENSHCOP00000012509	206 (aa)	XP_019726679	UPI00094E5CB4

Gene Model

Click here to download ENSHCOG00000015538's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG
hcq05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015538	srsf2a	51	30.476	ENSHCOG00000019962	sf3b6	78	31.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015538	srsf2a	99	68.293	ENSACIG00000018502	srsf2a	74	86.614	Amphilophus_citrinellus
ENSHCOG00000015538	srsf2a	99	63.333	ENSCHOG00000014019	-	51	91.429	Choloepus_hoffmanni
ENSHCOG00000015538	srsf2a	78	80.124	ENSDARG00000057484	srsf2a	88	96.154	Danio_rerio
ENSHCOG00000015538	srsf2a	96	48.223	ENSDNOG00000033905	-	54	62.745	Dasypus_novemcinctus
ENSHCOG00000015538	srsf2a	50	99.038	ENSGAFG00000005791	srsf2a	51	99.038	Gambusia_affinis
ENSHCOG00000015538	srsf2a	50	98.077	ENSGACG00000003105	srsf2a	52	98.077	Gasterosteus_aculeatus
ENSHCOG00000015538	srsf2a	53	96.330	ENSKMAG00000009464	srsf2a	82	75.936	Kryptolebias_marmoratus
ENSHCOG00000015538	srsf2a	53	97.248	ENSMMOG00000020751	srsf2a	50	97.196	Mola_mola
ENSHCOG00000015538	srsf2a	69	50.000	ENSMLUG00000026613	-	51	59.615	Myotis_lucifugus
ENSHCOG00000015538	srsf2a	50	94.231	ENSPMGG00000010911	srsf2a	50	94.231	Periophthalmus_magnuspinnatus
ENSHCOG00000015538	srsf2a	51	94.286	ENSSPUG00000007582	-	50	94.286	Sphenodon_punctatus
ENSHCOG00000015538	srsf2a	65	66.423	ENSSSCG00000012212	-	52	72.549	Sus_scrofa