EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000015541 (Gene tree)
Gene ID
109529849
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
9308 bases
Position
chrKV879784.1:136202-145509
Accession
109529849
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000012517RRM_1PF00076.228.2e-4412
ENSHCOP00000012517RRM_1PF00076.228.2e-4422
ENSHCOP00000025424RRM_1PF00076.229.5e-4412
ENSHCOP00000025424RRM_1PF00076.229.5e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000026970-2139XM_019893396ENSHCOP00000012517517 (aa)XP_019748955-
ENSHCOT00000019573-2190XM_019893344ENSHCOP00000025424534 (aa)XP_019748903UPI00094E3DBD
Gene Model
Click here to download ENSHCOG00000015541's gene model file
Pathways
Pathway IDPathway NameSource
hcq03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015541's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000015541puf60b5437.255ENSHCOG00000019367u2af2a6337.255
ENSHCOG00000015541puf60b9866.095ENSHCOG00000000378-9963.091
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000015541puf60b10081.550ENSG00000179950PUF6010082.255Homo_sapiens
ENSHCOG00000015541puf60b10093.820ENSAPOG00000001713puf60b9893.071Acanthochromis_polyacanthus
ENSHCOG00000015541puf60b10079.705ENSAMEG00000006406PUF609380.663Ailuropoda_melanoleuca
ENSHCOG00000015541puf60b9975.235ENSACIG00000003263-9974.906Amphilophus_citrinellus
ENSHCOG00000015541puf60b9993.421ENSACIG00000021705puf60b10092.669Amphilophus_citrinellus
ENSHCOG00000015541puf60b10093.820ENSAOCG00000005395puf60b10093.985Amphiprion_ocellaris
ENSHCOG00000015541puf60b10080.187ENSAOCG00000015558-9879.813Amphiprion_ocellaris
ENSHCOG00000015541puf60b9974.131ENSAPEG00000001836-9974.903Amphiprion_percula
ENSHCOG00000015541puf60b10091.296ENSAPEG00000011923puf60b9890.522Amphiprion_percula
ENSHCOG00000015541puf60b10079.104ENSATEG00000006303-9879.664Anabas_testudineus
ENSHCOG00000015541puf60b10094.007ENSATEG00000001730puf60b9894.007Anabas_testudineus
ENSHCOG00000015541puf60b10081.919ENSAPLG00000010150PUF609981.365Anas_platyrhynchos
ENSHCOG00000015541puf60b9981.111ENSACAG00000001645PUF609681.801Anolis_carolinensis
ENSHCOG00000015541puf60b10081.365ENSANAG00000018626PUF6010082.070Aotus_nancymaae
ENSHCOG00000015541puf60b9993.421ENSACLG00000004462puf60b10092.669Astatotilapia_calliptera
ENSHCOG00000015541puf60b9978.782ENSAMXG00000041030puf60b10077.306Astyanax_mexicanus
ENSHCOG00000015541puf60b10084.808ENSAMXG00000036570puf60a10083.912Astyanax_mexicanus
ENSHCOG00000015541puf60b10081.919ENSBTAG00000037493PUF609982.320Bos_taurus
ENSHCOG00000015541puf60b9146.400WBGene00004389rnp-67554.440Caenorhabditis_elegans
ENSHCOG00000015541puf60b10081.550ENSCJAG00000021485PUF609881.952Callithrix_jacchus
ENSHCOG00000015541puf60b10081.365ENSCAFG00000001400PUF609381.768Canis_familiaris
ENSHCOG00000015541puf60b10081.734ENSCAFG00020018754PUF609882.136Canis_lupus_dingo
ENSHCOG00000015541puf60b10081.919ENSCHIG00000001618PUF608682.320Capra_hircus
ENSHCOG00000015541puf60b10081.734ENSTSYG00000011912PUF6010082.440Carlito_syrichta
ENSHCOG00000015541puf60b10077.473ENSCPOG00000014613PUF609377.879Cavia_porcellus
ENSHCOG00000015541puf60b10081.734ENSCCAG00000007744PUF609882.136Cebus_capucinus
ENSHCOG00000015541puf60b10081.550ENSCATG00000035405PUF609881.952Cercocebus_atys
ENSHCOG00000015541puf60b10081.919ENSCLAG00000009154PUF609282.320Chinchilla_lanigera
ENSHCOG00000015541puf60b9981.852ENSCSAG00000008878PUF6010082.255Chlorocebus_sabaeus
ENSHCOG00000015541puf60b10081.734ENSCPBG00000005595PUF609881.181Chrysemys_picta_bellii
ENSHCOG00000015541puf60b6261.162ENSCING00000002156-8761.162Ciona_intestinalis
ENSHCOG00000015541puf60b9848.190ENSCING00000008436-9547.328Ciona_intestinalis
ENSHCOG00000015541puf60b7759.483ENSCSAVG00000004765-9747.410Ciona_savignyi
ENSHCOG00000015541puf60b9752.230ENSCSAVG00000001385-9951.756Ciona_savignyi
ENSHCOG00000015541puf60b8180.726ENSCANG00000041843PUF6010081.222Colobus_angolensis_palliatus
ENSHCOG00000015541puf60b10082.103ENSCGRG00001017442Puf609282.505Cricetulus_griseus_chok1gshd
ENSHCOG00000015541puf60b10082.103ENSCGRG00000003717Puf609282.505Cricetulus_griseus_crigri
ENSHCOG00000015541puf60b9975.581ENSCSEG00000014845-8977.326Cynoglossus_semilaevis
ENSHCOG00000015541puf60b10094.195ENSCSEG00000019887puf60b9294.195Cynoglossus_semilaevis
ENSHCOG00000015541puf60b9992.481ENSCVAG00000009386puf60b10091.729Cyprinodon_variegatus
ENSHCOG00000015541puf60b9179.055ENSCVAG00000001560-9877.002Cyprinodon_variegatus
ENSHCOG00000015541puf60b9979.298ENSDARG00000001241puf60b9998.413Danio_rerio
ENSHCOG00000015541puf60b10084.220ENSDARG00000032175puf60a9992.340Danio_rerio
ENSHCOG00000015541puf60b9867.917ENSDNOG00000043278PUF609068.352Dasypus_novemcinctus
ENSHCOG00000015541puf60b10082.103ENSDORG00000004585Puf609482.505Dipodomys_ordii
ENSHCOG00000015541puf60b9749.220FBgn0028577hfp9149.079Drosophila_melanogaster
ENSHCOG00000015541puf60b9768.713ENSEBUG00000005470-8867.460Eptatretus_burgeri
ENSHCOG00000015541puf60b9959.658ENSEBUG00000014291puf60b8462.565Eptatretus_burgeri
ENSHCOG00000015541puf60b10081.734ENSEASG00005009695PUF609882.136Equus_asinus_asinus
ENSHCOG00000015541puf60b10081.734ENSECAG00000024681PUF609682.440Equus_caballus
ENSHCOG00000015541puf60b10087.273ENSELUG00000006507puf60b9988.419Esox_lucius
ENSHCOG00000015541puf60b10085.794ENSELUG00000018443-9985.465Esox_lucius
ENSHCOG00000015541puf60b10081.734ENSFCAG00000001045PUF6010082.440Felis_catus
ENSHCOG00000015541puf60b10073.063ENSFALG00000001136PUF609874.033Ficedula_albicollis
ENSHCOG00000015541puf60b10081.734ENSFDAG00000017177PUF609282.136Fukomys_damarensis
ENSHCOG00000015541puf60b10093.071ENSFHEG00000020046puf60b10092.481Fundulus_heteroclitus
ENSHCOG00000015541puf60b9679.216ENSFHEG00000021687PUF6010078.443Fundulus_heteroclitus
ENSHCOG00000015541puf60b9980.827ENSGMOG00000006392puf60b9980.263Gadus_morhua
ENSHCOG00000015541puf60b6685.714ENSGALG00000039901PUF609484.874Gallus_gallus
ENSHCOG00000015541puf60b9977.563ENSGAFG00000004334-9976.285Gambusia_affinis
ENSHCOG00000015541puf60b10093.071ENSGAFG00000021040puf60b10092.481Gambusia_affinis
ENSHCOG00000015541puf60b10081.648ENSGACG00000004717puf60b9880.712Gasterosteus_aculeatus
ENSHCOG00000015541puf60b10069.460ENSGACG00000001484-10069.418Gasterosteus_aculeatus
ENSHCOG00000015541puf60b10081.734ENSGAGG00000013289PUF609181.181Gopherus_agassizii
ENSHCOG00000015541puf60b10081.550ENSGGOG00000004646PUF609881.952Gorilla_gorilla
ENSHCOG00000015541puf60b10080.561ENSHBUG00000009634-10080.426Haplochromis_burtoni
ENSHCOG00000015541puf60b10093.258ENSHBUG00000015118puf60b10092.669Haplochromis_burtoni
ENSHCOG00000015541puf60b10081.734ENSHGLG00000006111PUF609282.136Heterocephalus_glaber_female
ENSHCOG00000015541puf60b10081.734ENSHGLG00100012362PUF609282.136Heterocephalus_glaber_male
ENSHCOG00000015541puf60b10083.559ENSIPUG00000002453puf60a9983.057Ictalurus_punctatus
ENSHCOG00000015541puf60b9980.258ENSIPUG00000004660puf60b9979.705Ictalurus_punctatus
ENSHCOG00000015541puf60b10081.919ENSSTOG00000025037PUF609382.320Ictidomys_tridecemlineatus
ENSHCOG00000015541puf60b10082.103ENSJJAG00000001076Puf609282.505Jaculus_jaculus
ENSHCOG00000015541puf60b9993.421ENSKMAG00000016745puf60b10092.857Kryptolebias_marmoratus
ENSHCOG00000015541puf60b9976.252ENSKMAG00000010106-10076.252Kryptolebias_marmoratus
ENSHCOG00000015541puf60b9993.797ENSLBEG00000012505puf60b9993.797Labrus_bergylta
ENSHCOG00000015541puf60b7476.546ENSLACG00000005456PUF6010075.000Latimeria_chalumnae
ENSHCOG00000015541puf60b10085.448ENSLOCG00000010106puf60b9885.448Lepisosteus_oculatus
ENSHCOG00000015541puf60b10080.812ENSLAFG00000022929PUF609381.215Loxodonta_africana
ENSHCOG00000015541puf60b10081.550ENSMFAG00000043373PUF609881.952Macaca_fascicularis
ENSHCOG00000015541puf60b10081.550ENSMMUG00000013558PUF609881.952Macaca_mulatta
ENSHCOG00000015541puf60b10081.550ENSMNEG00000031099PUF609881.952Macaca_nemestrina
ENSHCOG00000015541puf60b9981.852ENSMLEG00000040009PUF6010082.255Mandrillus_leucophaeus
ENSHCOG00000015541puf60b10080.037ENSMAMG00000019476-9879.406Mastacembelus_armatus
ENSHCOG00000015541puf60b9995.301ENSMAMG00000010394puf60b10095.301Mastacembelus_armatus
ENSHCOG00000015541puf60b9993.421ENSMZEG00005018515puf60b10092.669Maylandia_zebra
ENSHCOG00000015541puf60b10080.561ENSMZEG00005019425-9880.187Maylandia_zebra
ENSHCOG00000015541puf60b10081.919ENSMGAG00000013070PUF609585.196Meleagris_gallopavo
ENSHCOG00000015541puf60b6985.904ENSMAUG00000014267-8985.106Mesocricetus_auratus
ENSHCOG00000015541puf60b9567.787ENSMAUG00000018549-9567.653Mesocricetus_auratus
ENSHCOG00000015541puf60b10081.734ENSMICG00000012226PUF609882.136Microcebus_murinus
ENSHCOG00000015541puf60b10082.103ENSMOCG00000018780Puf609382.505Microtus_ochrogaster
ENSHCOG00000015541puf60b9994.361ENSMMOG00000004217puf60b10092.857Mola_mola
ENSHCOG00000015541puf60b10073.896ENSMMOG00000018059-9973.187Mola_mola
ENSHCOG00000015541puf60b10081.550ENSMODG00000009161PUF609481.952Monodelphis_domestica
ENSHCOG00000015541puf60b10079.252ENSMALG00000000200-9878.879Monopterus_albus
ENSHCOG00000015541puf60b10088.202ENSMALG00000006797puf60b9888.202Monopterus_albus
ENSHCOG00000015541puf60b10082.288MGP_CAROLIEiJ_G0019910Puf609282.689Mus_caroli
ENSHCOG00000015541puf60b10082.288ENSMUSG00000002524Puf609282.689Mus_musculus
ENSHCOG00000015541puf60b10082.288MGP_PahariEiJ_G0019920Puf609282.689Mus_pahari
ENSHCOG00000015541puf60b10082.288MGP_SPRETEiJ_G0020812Puf609282.689Mus_spretus
ENSHCOG00000015541puf60b10081.550ENSMPUG00000008137PUF609281.952Mustela_putorius_furo
ENSHCOG00000015541puf60b10077.905ENSMLUG00000013032-9878.327Myotis_lucifugus
ENSHCOG00000015541puf60b10081.365ENSMLUG00000000238-9381.768Myotis_lucifugus
ENSHCOG00000015541puf60b10082.103ENSNGAG00000000712Puf6010082.810Nannospalax_galili
ENSHCOG00000015541puf60b8494.395ENSNBRG00000013047puf60b9594.170Neolamprologus_brichardi
ENSHCOG00000015541puf60b10080.561ENSNBRG00000017223-9880.000Neolamprologus_brichardi
ENSHCOG00000015541puf60b10081.550ENSNLEG00000002156PUF609881.952Nomascus_leucogenys
ENSHCOG00000015541puf60b6993.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSHCOG00000015541puf60b9760.994ENSODEG00000015513-9759.888Octodon_degus
ENSHCOG00000015541puf60b7185.955ENSODEG00000014024-8985.112Octodon_degus
ENSHCOG00000015541puf60b10080.374ENSONIG00000014030-9880.000Oreochromis_niloticus
ENSHCOG00000015541puf60b10093.258ENSONIG00000006247puf60b9892.509Oreochromis_niloticus
ENSHCOG00000015541puf60b9768.321ENSOANG00000006962PUF609768.893Ornithorhynchus_anatinus
ENSHCOG00000015541puf60b10093.258ENSORLG00000012279puf60b10092.669Oryzias_latipes
ENSHCOG00000015541puf60b9979.182ENSORLG00000028655-9977.654Oryzias_latipes
ENSHCOG00000015541puf60b10093.258ENSORLG00020007333puf6010092.669Oryzias_latipes_hni
ENSHCOG00000015541puf60b9979.626ENSORLG00020018144-9877.944Oryzias_latipes_hni
ENSHCOG00000015541puf60b9979.439ENSORLG00015016833-9877.944Oryzias_latipes_hsok
ENSHCOG00000015541puf60b10092.509ENSORLG00015007718puf60b10091.917Oryzias_latipes_hsok
ENSHCOG00000015541puf60b10095.131ENSOMEG00000001643puf60b9895.131Oryzias_melastigma
ENSHCOG00000015541puf60b9980.347ENSOMEG00000022185-9878.358Oryzias_melastigma
ENSHCOG00000015541puf60b10081.919ENSOGAG00000006259PUF609382.320Otolemur_garnettii
ENSHCOG00000015541puf60b10077.551ENSOARG00000016235PUF609879.444Ovis_aries
ENSHCOG00000015541puf60b10081.550ENSPPAG00000029933PUF609881.952Pan_paniscus
ENSHCOG00000015541puf60b10081.734ENSPPRG00000003257PUF6010082.440Panthera_pardus
ENSHCOG00000015541puf60b10080.952ENSPTIG00000009795PUF609879.926Panthera_tigris_altaica
ENSHCOG00000015541puf60b10081.550ENSPTRG00000043963-9881.952Pan_troglodytes
ENSHCOG00000015541puf60b10081.550ENSPTRG00000020670PUF609881.952Pan_troglodytes
ENSHCOG00000015541puf60b10081.550ENSPANG00000021936PUF609881.952Papio_anubis
ENSHCOG00000015541puf60b10087.079ENSPKIG00000012204puf60b10087.406Paramormyrops_kingsleyae
ENSHCOG00000015541puf60b10086.705ENSPKIG00000004295puf60a9987.393Paramormyrops_kingsleyae
ENSHCOG00000015541puf60b10082.320ENSPSIG00000004679PUF609881.952Pelodiscus_sinensis
ENSHCOG00000015541puf60b10091.806ENSPMGG00000013444puf60b10091.248Periophthalmus_magnuspinnatus
ENSHCOG00000015541puf60b10082.103ENSPEMG00000008820Puf609282.505Peromyscus_maniculatus_bairdii
ENSHCOG00000015541puf60b10081.919ENSPCIG00000020270PUF609882.320Phascolarctos_cinereus
ENSHCOG00000015541puf60b10093.071ENSPFOG00000019217puf60b9892.070Poecilia_formosa
ENSHCOG00000015541puf60b10078.358ENSPFOG00000011118-9877.425Poecilia_formosa
ENSHCOG00000015541puf60b9993.233ENSPLAG00000010754puf60b10092.481Poecilia_latipinna
ENSHCOG00000015541puf60b10078.545ENSPLAG00000017025-9177.239Poecilia_latipinna
ENSHCOG00000015541puf60b10078.545ENSPMEG00000009767-9177.612Poecilia_mexicana
ENSHCOG00000015541puf60b10093.071ENSPMEG00000000838puf60b10092.481Poecilia_mexicana
ENSHCOG00000015541puf60b10095.318ENSPREG00000005440puf60b9895.131Poecilia_reticulata
ENSHCOG00000015541puf60b8179.138ENSPPYG00000018951-9579.638Pongo_abelii
ENSHCOG00000015541puf60b8180.726ENSPCAG00000014837PUF6010081.222Procavia_capensis
ENSHCOG00000015541puf60b10081.550ENSPCOG00000027981PUF609881.952Propithecus_coquereli
ENSHCOG00000015541puf60b9996.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSHCOG00000015541puf60b10080.561ENSPNYG00000004273-9880.187Pundamilia_nyererei
ENSHCOG00000015541puf60b9993.421ENSPNYG00000002556puf60b10092.669Pundamilia_nyererei
ENSHCOG00000015541puf60b10084.808ENSPNAG00000019909puf60a9984.423Pygocentrus_nattereri
ENSHCOG00000015541puf60b10078.571ENSPNAG00000019415puf60b8976.641Pygocentrus_nattereri
ENSHCOG00000015541puf60b10082.288ENSRNOG00000009960Puf609282.689Rattus_norvegicus
ENSHCOG00000015541puf60b10081.550ENSRBIG00000035274PUF609881.952Rhinopithecus_bieti
ENSHCOG00000015541puf60b10081.550ENSRROG00000029360PUF609881.952Rhinopithecus_roxellana
ENSHCOG00000015541puf60b10080.258ENSSBOG00000027089PUF609880.110Saimiri_boliviensis_boliviensis
ENSHCOG00000015541puf60b9080.816ENSSHAG00000006668PUF608981.263Sarcophilus_harrisii
ENSHCOG00000015541puf60b10082.909ENSSFOG00015019371puf60a9986.029Scleropages_formosus
ENSHCOG00000015541puf60b9979.926ENSSFOG00015019619puf60b9980.502Scleropages_formosus
ENSHCOG00000015541puf60b7498.990ENSSMAG00000016381puf60b7698.990Scophthalmus_maximus
ENSHCOG00000015541puf60b10096.067ENSSDUG00000009935puf60b9996.067Seriola_dumerili
ENSHCOG00000015541puf60b9781.274ENSSDUG00000007048-9580.888Seriola_dumerili
ENSHCOG00000015541puf60b10096.629ENSSLDG00000024011puf60b10096.805Seriola_lalandi_dorsalis
ENSHCOG00000015541puf60b10078.479ENSSLDG00000007366-9978.439Seriola_lalandi_dorsalis
ENSHCOG00000015541puf60b6574.788ENSSPUG00000013518PUF609274.709Sphenodon_punctatus
ENSHCOG00000015541puf60b10096.442ENSSPAG00000012144puf60b10096.617Stegastes_partitus
ENSHCOG00000015541puf60b9980.819ENSSPAG00000020285-10080.488Stegastes_partitus
ENSHCOG00000015541puf60b9982.037ENSSSCG00000038800PUF609781.870Sus_scrofa
ENSHCOG00000015541puf60b10079.006ENSTGUG00000012797-9979.006Taeniopygia_guttata
ENSHCOG00000015541puf60b9978.682ENSTRUG00000008843-10078.101Takifugu_rubripes
ENSHCOG00000015541puf60b10095.880ENSTRUG00000005420puf60b10096.053Takifugu_rubripes
ENSHCOG00000015541puf60b10092.884ENSTNIG00000013675puf60b9992.697Tetraodon_nigroviridis
ENSHCOG00000015541puf60b10076.404ENSTNIG00000003069-9975.655Tetraodon_nigroviridis
ENSHCOG00000015541puf60b5781.639ENSTBEG00000002751-9780.656Tupaia_belangeri
ENSHCOG00000015541puf60b7762.973ENSTBEG00000001899-10063.243Tupaia_belangeri
ENSHCOG00000015541puf60b9980.185ENSTTRG00000017088PUF6010081.331Tursiops_truncatus
ENSHCOG00000015541puf60b10081.734ENSUAMG00000024917PUF609882.136Ursus_americanus
ENSHCOG00000015541puf60b10076.937ENSUMAG00000000272PUF609377.532Ursus_maritimus
ENSHCOG00000015541puf60b10081.734ENSVVUG00000022527PUF6010082.440Vulpes_vulpes
ENSHCOG00000015541puf60b10080.258ENSXETG00000012469puf609979.048Xenopus_tropicalis
ENSHCOG00000015541puf60b9993.010ENSXCOG00000012355puf60b10092.233Xiphophorus_couchianus
ENSHCOG00000015541puf60b10078.035ENSXMAG00000010507-9876.686Xiphophorus_maculatus
ENSHCOG00000015541puf60b10093.071ENSXMAG00000001862puf60b10092.481Xiphophorus_maculatus

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