EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015577 (Gene tree)
Gene ID: 109507643
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: ADP-ribosylation factor 4-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5459 bases
Position: chrKV880484.1:2881882-2887340
Accession: 109507643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012547	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000026976	-	1657	XM_019857244	ENSHCOP00000012547	179 (aa)	XP_019712803	UPI00094EF64D
ENSHCOT00000019603	-	468	-	ENSHCOP00000025431	155 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000015577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015577	-	92	46.199	ENSHCOG00000014829	-	86	46.199
ENSHCOG00000015577	-	99	78.531	ENSHCOG00000003257	-	98	78.531
ENSHCOG00000015577	-	92	30.723	ENSHCOG00000005512	-	89	30.723
ENSHCOG00000015577	-	92	31.325	ENSHCOG00000010468	arl8bb	89	31.325
ENSHCOG00000015577	-	97	42.857	ENSHCOG00000016255	arl3l2	95	42.857
ENSHCOG00000015577	-	88	48.171	ENSHCOG00000006452	arl4aa	85	48.171
ENSHCOG00000015577	-	89	41.718	ENSHCOG00000019844	-	84	41.718
ENSHCOG00000015577	-	91	44.643	ENSHCOG00000011881	arl4d	84	44.643
ENSHCOG00000015577	-	92	31.928	ENSHCOG00000000920	arl8ba	89	31.928
ENSHCOG00000015577	-	89	31.034	ENSHCOG00000002845	sar1ab	69	31.034
ENSHCOG00000015577	-	99	78.531	ENSHCOG00000003460	arf3a	98	78.531
ENSHCOG00000015577	-	93	42.771	ENSHCOG00000015779	arl8	95	42.771
ENSHCOG00000015577	-	92	44.512	ENSHCOG00000015600	arl3	88	44.512
ENSHCOG00000015577	-	99	44.633	ENSHCOG00000016616	ARL5A	98	44.633
ENSHCOG00000015577	-	87	45.963	ENSHCOG00000009562	arl14	76	45.963
ENSHCOG00000015577	-	99	57.062	ENSHCOG00000005566	arl1	98	57.062
ENSHCOG00000015577	-	97	41.176	ENSHCOG00000009949	arl2	94	41.176
ENSHCOG00000015577	-	93	43.373	ENSHCOG00000017576	-	93	43.373
ENSHCOG00000015577	-	99	78.531	ENSHCOG00000020217	-	98	78.531
ENSHCOG00000015577	-	87	43.671	ENSHCOG00000002573	arl11	89	43.671
ENSHCOG00000015577	-	99	79.661	ENSHCOG00000018128	ARF1	98	79.661
ENSHCOG00000015577	-	93	40.805	ENSHCOG00000003724	ARL6	97	34.975
ENSHCOG00000015577	-	98	45.055	ENSHCOG00000008233	arl4cb	91	45.055
ENSHCOG00000015577	-	88	43.373	ENSHCOG00000008536	-	82	43.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015577	-	100	83.799	ENSG00000004059	ARF5	99	84.106	Homo_sapiens
ENSHCOG00000015577	-	100	89.385	ENSAPOG00000000667	-	99	89.385	Acanthochromis_polyacanthus
ENSHCOG00000015577	-	100	83.799	ENSAMEG00000004635	ARF5	99	83.799	Ailuropoda_melanoleuca
ENSHCOG00000015577	-	99	69.492	ENSACIG00000014610	zgc:110286	98	69.492	Amphilophus_citrinellus
ENSHCOG00000015577	-	100	86.592	ENSACIG00000005843	arf5	99	86.592	Amphilophus_citrinellus
ENSHCOG00000015577	-	100	88.827	ENSACIG00000000467	-	99	88.827	Amphilophus_citrinellus
ENSHCOG00000015577	-	100	87.151	ENSAOCG00000023329	arf5	99	87.151	Amphiprion_ocellaris
ENSHCOG00000015577	-	100	88.827	ENSAOCG00000008113	-	99	88.827	Amphiprion_ocellaris
ENSHCOG00000015577	-	100	88.827	ENSAPEG00000003087	-	99	88.827	Amphiprion_percula
ENSHCOG00000015577	-	100	87.151	ENSAPEG00000024614	arf5	99	87.151	Amphiprion_percula
ENSHCOG00000015577	-	100	86.034	ENSATEG00000003053	ARF5	99	86.034	Anabas_testudineus
ENSHCOG00000015577	-	100	90.503	ENSATEG00000001302	-	99	90.503	Anabas_testudineus
ENSHCOG00000015577	-	100	83.799	ENSANAG00000026446	ARF5	99	83.799	Aotus_nancymaae
ENSHCOG00000015577	-	100	87.151	ENSACLG00000005705	arf5	99	87.151	Astatotilapia_calliptera
ENSHCOG00000015577	-	100	89.385	ENSACLG00000025604	-	99	89.385	Astatotilapia_calliptera
ENSHCOG00000015577	-	100	86.592	ENSAMXG00000038224	-	99	86.592	Astyanax_mexicanus
ENSHCOG00000015577	-	100	85.475	ENSAMXG00000031467	arf4a	99	85.475	Astyanax_mexicanus
ENSHCOG00000015577	-	100	85.475	ENSAMXG00000031774	ARF5	99	85.475	Astyanax_mexicanus
ENSHCOG00000015577	-	100	86.592	ENSAMXG00000004249	-	99	86.592	Astyanax_mexicanus
ENSHCOG00000015577	-	100	83.799	ENSBTAG00000009366	ARF5	99	83.799	Bos_taurus
ENSHCOG00000015577	-	100	82.123	WBGene00000183	arf-3	99	82.123	Caenorhabditis_elegans
ENSHCOG00000015577	-	100	83.799	ENSCJAG00000017604	ARF5	99	83.799	Callithrix_jacchus
ENSHCOG00000015577	-	100	70.423	ENSCAFG00020021629	ARF5	99	70.423	Canis_lupus_dingo
ENSHCOG00000015577	-	100	83.799	ENSCHIG00000018906	ARF5	99	83.799	Capra_hircus
ENSHCOG00000015577	-	100	82.222	ENSCPOG00000006239	ARF5	99	82.222	Cavia_porcellus
ENSHCOG00000015577	-	100	83.799	ENSCCAG00000027943	-	99	83.799	Cebus_capucinus
ENSHCOG00000015577	-	100	83.799	ENSCATG00000010217	ARF5	99	83.799	Cercocebus_atys
ENSHCOG00000015577	-	100	83.799	ENSCLAG00000007930	ARF5	99	83.799	Chinchilla_lanigera
ENSHCOG00000015577	-	100	83.799	ENSCSAG00000010208	ARF5	99	83.799	Chlorocebus_sabaeus
ENSHCOG00000015577	-	100	76.536	ENSCING00000004846	-	99	76.536	Ciona_intestinalis
ENSHCOG00000015577	-	100	74.033	ENSCSAVG00000001959	-	99	74.033	Ciona_savignyi
ENSHCOG00000015577	-	89	83.125	ENSCANG00000037234	ARF5	98	83.125	Colobus_angolensis_palliatus
ENSHCOG00000015577	-	100	83.799	ENSCGRG00001024919	Arf5	99	83.799	Cricetulus_griseus_chok1gshd
ENSHCOG00000015577	-	100	84.916	ENSCSEG00000006004	arf5	99	84.916	Cynoglossus_semilaevis
ENSHCOG00000015577	-	100	87.151	ENSCVAG00000007314	-	99	87.151	Cyprinodon_variegatus
ENSHCOG00000015577	-	100	87.151	ENSCVAG00000009124	ARF5	99	87.151	Cyprinodon_variegatus
ENSHCOG00000015577	-	100	88.268	ENSCVAG00000011381	-	99	88.268	Cyprinodon_variegatus
ENSHCOG00000015577	-	100	67.222	ENSDARG00000074210	ARF5	88	67.222	Danio_rerio
ENSHCOG00000015577	-	100	87.151	ENSDARG00000070472	arf5	99	87.151	Danio_rerio
ENSHCOG00000015577	-	100	84.358	ENSDARG00000045989	arf4a	99	84.358	Danio_rerio
ENSHCOG00000015577	-	100	86.592	ENSDARG00000113899	zgc:77650	99	86.592	Danio_rerio
ENSHCOG00000015577	-	100	83.799	ENSDORG00000000325	Arf5	99	83.799	Dipodomys_ordii
ENSHCOG00000015577	-	100	83.799	FBgn0013749	Arf102F	99	83.799	Drosophila_melanogaster
ENSHCOG00000015577	-	97	81.034	ENSETEG00000009275	ARF5	99	81.034	Echinops_telfairi
ENSHCOG00000015577	-	100	83.799	ENSEBUG00000014420	-	99	83.799	Eptatretus_burgeri
ENSHCOG00000015577	-	100	71.508	ENSEBUG00000004484	-	99	71.508	Eptatretus_burgeri
ENSHCOG00000015577	-	100	71.508	ENSELUG00000014428	arf4	99	71.508	Esox_lucius
ENSHCOG00000015577	-	100	83.799	ENSFCAG00000005482	ARF5	99	83.799	Felis_catus
ENSHCOG00000015577	-	100	86.592	ENSFHEG00000023119	arf5	99	86.592	Fundulus_heteroclitus
ENSHCOG00000015577	-	100	83.240	ENSGMOG00000008747	arf5	99	83.240	Gadus_morhua
ENSHCOG00000015577	-	100	84.358	ENSGMOG00000019109	-	99	84.358	Gadus_morhua
ENSHCOG00000015577	-	100	86.592	ENSGAFG00000005163	-	99	86.592	Gambusia_affinis
ENSHCOG00000015577	-	100	87.151	ENSGAFG00000018703	arf5	99	87.151	Gambusia_affinis
ENSHCOG00000015577	-	100	87.151	ENSGACG00000012500	-	99	87.151	Gasterosteus_aculeatus
ENSHCOG00000015577	-	100	86.592	ENSGACG00000000686	arf5	99	86.592	Gasterosteus_aculeatus
ENSHCOG00000015577	-	100	84.358	ENSGAGG00000000231	ARF5	99	84.358	Gopherus_agassizii
ENSHCOG00000015577	-	100	83.799	ENSGGOG00000016749	ARF5	99	83.799	Gorilla_gorilla
ENSHCOG00000015577	-	100	87.151	ENSHBUG00000008546	arf5	99	87.151	Haplochromis_burtoni
ENSHCOG00000015577	-	100	89.385	ENSHBUG00000011041	-	99	89.385	Haplochromis_burtoni
ENSHCOG00000015577	-	100	83.799	ENSHGLG00000007494	ARF5	99	83.799	Heterocephalus_glaber_female
ENSHCOG00000015577	-	100	82.682	ENSHGLG00100006040	ARF5	60	82.682	Heterocephalus_glaber_male
ENSHCOG00000015577	-	100	85.475	ENSIPUG00000007016	arf4	99	85.475	Ictalurus_punctatus
ENSHCOG00000015577	-	100	88.268	ENSIPUG00000004159	Arf5	99	88.268	Ictalurus_punctatus
ENSHCOG00000015577	-	100	88.268	ENSIPUG00000004215	arf5	99	88.268	Ictalurus_punctatus
ENSHCOG00000015577	-	100	67.039	ENSIPUG00000006913	-	70	67.039	Ictalurus_punctatus
ENSHCOG00000015577	-	100	83.799	ENSSTOG00000002104	ARF5	99	83.799	Ictidomys_tridecemlineatus
ENSHCOG00000015577	-	100	83.799	ENSJJAG00000005105	Arf5	99	83.799	Jaculus_jaculus
ENSHCOG00000015577	-	100	89.385	ENSKMAG00000012816	-	99	89.385	Kryptolebias_marmoratus
ENSHCOG00000015577	-	100	86.034	ENSLBEG00000026532	arf5	99	86.034	Labrus_bergylta
ENSHCOG00000015577	-	99	84.831	ENSLBEG00000012002	-	98	84.831	Labrus_bergylta
ENSHCOG00000015577	-	100	83.799	ENSLAFG00000011469	ARF5	99	83.799	Loxodonta_africana
ENSHCOG00000015577	-	100	83.799	ENSMFAG00000019772	ARF5	99	83.799	Macaca_fascicularis
ENSHCOG00000015577	-	100	83.799	ENSMMUG00000046381	ARF5	99	83.799	Macaca_mulatta
ENSHCOG00000015577	-	100	83.799	ENSMNEG00000040893	ARF5	99	83.799	Macaca_nemestrina
ENSHCOG00000015577	-	100	89.944	ENSMAMG00000008223	-	99	89.944	Mastacembelus_armatus
ENSHCOG00000015577	-	100	85.475	ENSMAMG00000021160	arf5	99	85.475	Mastacembelus_armatus
ENSHCOG00000015577	-	100	87.151	ENSMZEG00005015033	arf5	66	87.151	Maylandia_zebra
ENSHCOG00000015577	-	88	88.535	ENSMZEG00005019741	-	93	88.535	Maylandia_zebra
ENSHCOG00000015577	-	100	83.799	ENSMAUG00000014825	Arf5	99	83.799	Mesocricetus_auratus
ENSHCOG00000015577	-	100	83.799	ENSMICG00000000091	ARF5	99	83.799	Microcebus_murinus
ENSHCOG00000015577	-	100	83.799	ENSMOCG00000022861	Arf5	99	83.799	Microtus_ochrogaster
ENSHCOG00000015577	-	100	83.240	ENSMODG00000015229	ARF5	99	83.240	Monodelphis_domestica
ENSHCOG00000015577	-	100	86.034	ENSMALG00000010117	-	99	86.034	Monopterus_albus
ENSHCOG00000015577	-	100	89.385	ENSMALG00000006020	-	99	89.385	Monopterus_albus
ENSHCOG00000015577	-	100	69.274	ENSMALG00000022638	zgc:110286	100	69.274	Monopterus_albus
ENSHCOG00000015577	-	100	83.799	MGP_CAROLIEiJ_G0028156	Arf5	99	83.799	Mus_caroli
ENSHCOG00000015577	-	100	83.799	ENSMUSG00000020440	Arf5	99	83.799	Mus_musculus
ENSHCOG00000015577	-	100	83.799	MGP_PahariEiJ_G0021914	Arf5	99	83.799	Mus_pahari
ENSHCOG00000015577	-	100	83.799	MGP_SPRETEiJ_G0029156	Arf5	99	83.799	Mus_spretus
ENSHCOG00000015577	-	100	83.799	ENSMPUG00000006675	ARF5	99	83.799	Mustela_putorius_furo
ENSHCOG00000015577	-	100	83.799	ENSMLUG00000017122	ARF5	99	83.799	Myotis_lucifugus
ENSHCOG00000015577	-	100	83.799	ENSNGAG00000011743	Arf5	99	83.799	Nannospalax_galili
ENSHCOG00000015577	-	100	87.151	ENSNBRG00000018854	arf5	99	87.151	Neolamprologus_brichardi
ENSHCOG00000015577	-	100	83.799	ENSODEG00000011800	ARF5	99	83.799	Octodon_degus
ENSHCOG00000015577	-	100	89.385	ENSONIG00000014890	-	99	89.385	Oreochromis_niloticus
ENSHCOG00000015577	-	100	87.151	ENSONIG00000007594	arf5	99	87.151	Oreochromis_niloticus
ENSHCOG00000015577	-	100	83.799	ENSOCUG00000024365	ARF5	99	83.799	Oryctolagus_cuniculus
ENSHCOG00000015577	-	100	89.944	ENSORLG00020001755	-	99	89.944	Oryzias_latipes_hni
ENSHCOG00000015577	-	100	86.592	ENSOMEG00000020821	ARF5	99	86.592	Oryzias_melastigma
ENSHCOG00000015577	-	100	90.503	ENSOMEG00000000211	-	64	90.503	Oryzias_melastigma
ENSHCOG00000015577	-	100	83.799	ENSOGAG00000013336	ARF5	99	83.799	Otolemur_garnettii
ENSHCOG00000015577	-	100	83.799	ENSPPAG00000037755	ARF5	99	83.799	Pan_paniscus
ENSHCOG00000015577	-	100	83.799	ENSPPRG00000004674	ARF5	99	83.799	Panthera_pardus
ENSHCOG00000015577	-	100	83.799	ENSPTRG00000019651	ARF5	99	83.799	Pan_troglodytes
ENSHCOG00000015577	-	100	83.799	ENSPANG00000032970	ARF5	99	83.799	Papio_anubis
ENSHCOG00000015577	-	100	84.916	ENSPKIG00000025381	-	99	84.916	Paramormyrops_kingsleyae
ENSHCOG00000015577	-	100	84.916	ENSPKIG00000013814	-	99	84.916	Paramormyrops_kingsleyae
ENSHCOG00000015577	-	100	84.358	ENSPKIG00000025349	arf4a	99	84.358	Paramormyrops_kingsleyae
ENSHCOG00000015577	-	100	84.916	ENSPMGG00000009985	-	99	84.916	Periophthalmus_magnuspinnatus
ENSHCOG00000015577	-	100	83.799	ENSPEMG00000021476	Arf5	99	83.799	Peromyscus_maniculatus_bairdii
ENSHCOG00000015577	-	100	78.212	ENSPMAG00000009600	arf4a	100	78.212	Petromyzon_marinus
ENSHCOG00000015577	-	100	87.151	ENSPFOG00000015817	arf5	99	87.151	Poecilia_formosa
ENSHCOG00000015577	-	100	86.111	ENSPFOG00000017992	-	99	86.111	Poecilia_formosa
ENSHCOG00000015577	-	100	87.151	ENSPLAG00000006742	arf5	99	87.151	Poecilia_latipinna
ENSHCOG00000015577	-	100	86.592	ENSPLAG00000015630	-	99	86.592	Poecilia_latipinna
ENSHCOG00000015577	-	100	86.592	ENSPMEG00000004624	-	99	86.592	Poecilia_mexicana
ENSHCOG00000015577	-	100	87.151	ENSPMEG00000009605	arf5	99	87.151	Poecilia_mexicana
ENSHCOG00000015577	-	100	83.799	ENSPCOG00000027640	ARF5	99	83.799	Propithecus_coquereli
ENSHCOG00000015577	-	100	83.799	ENSPVAG00000013940	ARF5	99	83.799	Pteropus_vampyrus
ENSHCOG00000015577	-	100	87.151	ENSPNYG00000001663	arf5	99	87.151	Pundamilia_nyererei
ENSHCOG00000015577	-	100	89.385	ENSPNYG00000004931	-	99	89.385	Pundamilia_nyererei
ENSHCOG00000015577	-	100	86.592	ENSPNAG00000024427	-	99	86.592	Pygocentrus_nattereri
ENSHCOG00000015577	-	100	71.508	ENSPNAG00000005054	-	99	71.508	Pygocentrus_nattereri
ENSHCOG00000015577	-	100	68.156	ENSPNAG00000004475	-	99	68.156	Pygocentrus_nattereri
ENSHCOG00000015577	-	100	84.916	ENSPNAG00000004745	arf4a	99	84.916	Pygocentrus_nattereri
ENSHCOG00000015577	-	100	83.799	ENSRNOG00000007806	Arf5	99	83.799	Rattus_norvegicus
ENSHCOG00000015577	-	100	83.799	ENSRBIG00000039868	ARF5	99	83.799	Rhinopithecus_bieti
ENSHCOG00000015577	-	100	83.799	ENSRROG00000041157	ARF5	99	83.799	Rhinopithecus_roxellana
ENSHCOG00000015577	-	100	83.799	ENSSBOG00000021669	ARF5	99	83.799	Saimiri_boliviensis_boliviensis
ENSHCOG00000015577	-	100	83.240	ENSSHAG00000015053	ARF5	99	83.240	Sarcophilus_harrisii
ENSHCOG00000015577	-	100	77.095	ENSSFOG00015007701	-	99	77.095	Scleropages_formosus
ENSHCOG00000015577	-	100	84.916	ENSSFOG00015020707	ARF5	99	84.916	Scleropages_formosus
ENSHCOG00000015577	-	100	84.916	ENSSMAG00000011361	arf5	99	84.916	Scophthalmus_maximus
ENSHCOG00000015577	-	100	87.151	ENSSMAG00000004541	-	99	87.151	Scophthalmus_maximus
ENSHCOG00000015577	-	100	86.034	ENSSDUG00000005105	arf5	99	86.034	Seriola_dumerili
ENSHCOG00000015577	-	100	86.034	ENSSLDG00000017188	arf5	99	86.034	Seriola_lalandi_dorsalis
ENSHCOG00000015577	-	100	89.944	ENSSPAG00000022680	-	99	89.944	Stegastes_partitus
ENSHCOG00000015577	-	100	86.034	ENSSPAG00000014434	arf5	99	86.034	Stegastes_partitus
ENSHCOG00000015577	-	100	83.799	ENSSSCG00000016593	ARF5	99	83.799	Sus_scrofa
ENSHCOG00000015577	-	100	86.034	ENSTRUG00000025462	-	100	86.034	Takifugu_rubripes
ENSHCOG00000015577	-	100	84.358	ENSTNIG00000017954	-	100	84.358	Tetraodon_nigroviridis
ENSHCOG00000015577	-	100	86.034	ENSTNIG00000003348	arf5	100	86.034	Tetraodon_nigroviridis
ENSHCOG00000015577	-	90	84.472	ENSTTRG00000006043	ARF5	99	84.472	Tursiops_truncatus
ENSHCOG00000015577	-	100	83.799	ENSUAMG00000012982	ARF5	99	83.799	Ursus_americanus
ENSHCOG00000015577	-	100	83.799	ENSVVUG00000007062	ARF5	99	83.799	Vulpes_vulpes
ENSHCOG00000015577	-	100	86.592	ENSXCOG00000020384	-	99	86.592	Xiphophorus_couchianus
ENSHCOG00000015577	-	100	87.151	ENSXMAG00000015306	arf5	99	87.151	Xiphophorus_maculatus
ENSHCOG00000015577	-	100	86.592	ENSXMAG00000004558	-	99	86.592	Xiphophorus_maculatus