EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015710 (Gene tree)
Gene ID: 109513387
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 10306 bases
Position: chrKV879860.1:791627-801932
Accession: 109513387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025521	RIO1	PF01163.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019758	-	5360	XM_019865813	ENSHCOP00000025521	762 (aa)	XP_019721372	UPI00094ED6EF

Gene Model

Click here to download ENSHCOG00000015710's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04020	Calcium signaling pathway	KEGG
hcq04270	Vascular smooth muscle contraction	KEGG
hcq04371	Apelin signaling pathway	KEGG
hcq04510	Focal adhesion	KEGG
hcq04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015710's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015710	-	85	73.692	ENSAPOG00000019520	-	88	66.095	Acanthochromis_polyacanthus
ENSHCOG00000015710	-	90	55.523	ENSAPOG00000023231	mylk5	78	55.523	Acanthochromis_polyacanthus
ENSHCOG00000015710	-	99	59.538	ENSACIG00000024477	-	99	59.538	Amphilophus_citrinellus
ENSHCOG00000015710	-	99	60.441	ENSAOCG00000024465	-	99	60.441	Amphiprion_ocellaris
ENSHCOG00000015710	-	86	56.581	ENSAOCG00000014130	mylk5	82	56.555	Amphiprion_ocellaris
ENSHCOG00000015710	-	86	56.581	ENSAPEG00000017851	mylk5	81	57.032	Amphiprion_percula
ENSHCOG00000015710	-	99	63.255	ENSAPEG00000014652	-	99	63.255	Amphiprion_percula
ENSHCOG00000015710	-	85	57.692	ENSATEG00000002426	mylk5	78	57.692	Anabas_testudineus
ENSHCOG00000015710	-	99	59.341	ENSACLG00000007583	-	99	59.341	Astatotilapia_calliptera
ENSHCOG00000015710	-	86	57.208	ENSACLG00000003301	mylk5	80	57.208	Astatotilapia_calliptera
ENSHCOG00000015710	-	99	52.918	ENSAMXG00000019493	-	97	55.430	Astyanax_mexicanus
ENSHCOG00000015710	-	86	55.204	ENSCSEG00000017281	mylk5	89	56.037	Cynoglossus_semilaevis
ENSHCOG00000015710	-	87	57.229	ENSCVAG00000022813	mylk5	81	57.229	Cyprinodon_variegatus
ENSHCOG00000015710	-	85	69.385	ENSCVAG00000022136	-	75	69.385	Cyprinodon_variegatus
ENSHCOG00000015710	-	85	67.281	ENSFHEG00000010974	-	76	67.281	Fundulus_heteroclitus
ENSHCOG00000015710	-	88	56.869	ENSFHEG00000011638	-	84	56.869	Fundulus_heteroclitus
ENSHCOG00000015710	-	85	56.836	ENSGAFG00000000269	mylk5	78	56.308	Gambusia_affinis
ENSHCOG00000015710	-	85	55.255	ENSGACG00000008527	mylk5	99	55.255	Gasterosteus_aculeatus
ENSHCOG00000015710	-	85	57.405	ENSHBUG00000002257	mylk5	77	57.405	Haplochromis_burtoni
ENSHCOG00000015710	-	99	56.968	ENSHBUG00000016459	-	99	56.968	Haplochromis_burtoni
ENSHCOG00000015710	-	86	56.012	ENSIPUG00000012659	mylk5	81	56.012	Ictalurus_punctatus
ENSHCOG00000015710	-	86	57.035	ENSKMAG00000019605	mylk5	77	57.121	Kryptolebias_marmoratus
ENSHCOG00000015710	-	86	67.841	ENSKMAG00000016742	-	76	67.841	Kryptolebias_marmoratus
ENSHCOG00000015710	-	85	72.881	ENSLBEG00000004115	-	78	72.881	Labrus_bergylta
ENSHCOG00000015710	-	86	57.663	ENSLBEG00000003526	mylk5	80	58.652	Labrus_bergylta
ENSHCOG00000015710	-	86	57.035	ENSMAMG00000000610	mylk5	77	57.562	Mastacembelus_armatus
ENSHCOG00000015710	-	86	57.208	ENSMZEG00005022663	mylk5	78	57.557	Maylandia_zebra
ENSHCOG00000015710	-	85	56.240	ENSMMOG00000020584	mylk5	80	56.240	Mola_mola
ENSHCOG00000015710	-	86	56.469	ENSMALG00000004945	mylk5	76	56.469	Monopterus_albus
ENSHCOG00000015710	-	88	69.585	ENSMALG00000022416	-	75	69.585	Monopterus_albus
ENSHCOG00000015710	-	59	62.061	ENSONIG00000019875	-	99	62.061	Oreochromis_niloticus
ENSHCOG00000015710	-	84	58.079	ENSONIG00000001203	mylk5	99	62.061	Oreochromis_niloticus
ENSHCOG00000015710	-	85	68.230	ENSONIG00000016230	-	78	68.230	Oreochromis_niloticus
ENSHCOG00000015710	-	85	55.083	ENSPFOG00000013597	mylk5	77	55.083	Poecilia_formosa
ENSHCOG00000015710	-	85	55.778	ENSPLAG00000023779	mylk5	78	55.778	Poecilia_latipinna
ENSHCOG00000015710	-	90	53.525	ENSPMEG00000023897	mylk5	80	52.915	Poecilia_mexicana
ENSHCOG00000015710	-	81	55.968	ENSPREG00000009707	mylk5	86	55.968	Poecilia_reticulata
ENSHCOG00000015710	-	85	66.615	ENSPREG00000003222	-	76	66.615	Poecilia_reticulata
ENSHCOG00000015710	-	99	59.747	ENSPNYG00000019509	-	81	78.873	Pundamilia_nyererei
ENSHCOG00000015710	-	85	56.183	ENSPNYG00000010046	mylk5	75	56.183	Pundamilia_nyererei
ENSHCOG00000015710	-	94	56.276	ENSSFOG00015004885	-	99	56.276	Scleropages_formosus
ENSHCOG00000015710	-	99	62.201	ENSSMAG00000020328	-	99	62.201	Scophthalmus_maximus
ENSHCOG00000015710	-	86	57.444	ENSSMAG00000006784	mylk5	76	57.444	Scophthalmus_maximus
ENSHCOG00000015710	-	100	61.302	ENSSDUG00000020847	-	100	61.302	Seriola_dumerili
ENSHCOG00000015710	-	100	61.210	ENSSLDG00000019897	-	99	61.210	Seriola_lalandi_dorsalis
ENSHCOG00000015710	-	86	57.774	ENSSPAG00000020815	mylk5	81	57.774	Stegastes_partitus
ENSHCOG00000015710	-	99	60.150	ENSSPAG00000019068	-	99	60.150	Stegastes_partitus
ENSHCOG00000015710	-	86	54.148	ENSTRUG00000015150	mylk5	76	54.545	Takifugu_rubripes
ENSHCOG00000015710	-	77	54.817	ENSTNIG00000011699	mylk5	99	54.817	Tetraodon_nigroviridis
ENSHCOG00000015710	-	54	73.286	ENSTNIG00000004928	-	100	73.286	Tetraodon_nigroviridis
ENSHCOG00000015710	-	87	62.631	ENSXCOG00000005927	-	86	74.721	Xiphophorus_couchianus
ENSHCOG00000015710	-	85	56.836	ENSXMAG00000007789	mylk5	76	56.836	Xiphophorus_maculatus
ENSHCOG00000015710	-	70	68.097	ENSXMAG00000015589	-	68	68.097	Xiphophorus_maculatus