EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000015738 (Gene tree)
Gene ID: 109515890
Gene Symbol: dicer1
Alias: fc39d11|fc74b05|wu:fc39d11|wu:fc74b05
Full Name: dicer 1%2C ribonuclease III
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 98377 bases
Position: chrKV879707.1:176532-274908
Accession: 109515890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000012638	Ribonuclease_3	PF00636.26	2.1e-68	1	2
ENSHCOP00000012638	Ribonuclease_3	PF00636.26	2.1e-68	2	2
ENSHCOP00000012638	PAZ	PF02170.22	9.6e-40	1	1
ENSHCOP00000012638	Ribonucleas_3_3	PF14622.6	5.1e-25	1	1
ENSHCOP00000012638	ResIII	PF04851.15	7.4e-10	1	1
ENSHCOP00000012638	DEAD	PF00270.29	2.9e-08	1	1
ENSHCOP00000012638	Dicer_dimer	PF03368.14	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000019729	-	5613	XM_019869994	ENSHCOP00000012638	1870 (aa)	XP_019725553	-

Gene Model

Click here to download ENSHCOG00000015738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015738's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015738	dicer1	100	76.114	ENSG00000100697	DICER1	86	93.333	Homo_sapiens
ENSHCOG00000015738	dicer1	100	84.233	ENSAPOG00000020381	dicer1	100	84.285	Acanthochromis_polyacanthus
ENSHCOG00000015738	dicer1	100	76.166	ENSAMEG00000006447	DICER1	99	76.242	Ailuropoda_melanoleuca
ENSHCOG00000015738	dicer1	95	86.525	ENSACIG00000000890	dicer1	99	86.525	Amphilophus_citrinellus
ENSHCOG00000015738	dicer1	100	84.285	ENSAOCG00000023381	dicer1	100	84.337	Amphiprion_ocellaris
ENSHCOG00000015738	dicer1	100	84.233	ENSAPEG00000022809	dicer1	100	84.285	Amphiprion_percula
ENSHCOG00000015738	dicer1	100	84.382	ENSATEG00000014048	dicer1	100	84.486	Anabas_testudineus
ENSHCOG00000015738	dicer1	100	76.146	ENSAPLG00000012407	DICER1	99	76.146	Anas_platyrhynchos
ENSHCOG00000015738	dicer1	100	76.309	ENSACAG00000013033	DICER1	99	76.413	Anolis_carolinensis
ENSHCOG00000015738	dicer1	100	76.087	ENSANAG00000023622	DICER1	99	76.282	Aotus_nancymaae
ENSHCOG00000015738	dicer1	100	84.128	ENSACLG00000007920	dicer1	100	84.128	Astatotilapia_calliptera
ENSHCOG00000015738	dicer1	100	80.507	ENSAMXG00000010730	dicer1	100	80.487	Astyanax_mexicanus
ENSHCOG00000015738	dicer1	100	75.971	ENSBTAG00000012852	DICER1	99	76.178	Bos_taurus
ENSHCOG00000015738	dicer1	80	53.846	WBGene00000939	dcr-1	78	53.846	Caenorhabditis_elegans
ENSHCOG00000015738	dicer1	100	76.087	ENSCJAG00000006225	DICER1	99	76.334	Callithrix_jacchus
ENSHCOG00000015738	dicer1	100	75.959	ENSCAFG00000017701	DICER1	99	76.062	Canis_familiaris
ENSHCOG00000015738	dicer1	100	75.959	ENSCAFG00020014247	DICER1	99	76.062	Canis_lupus_dingo
ENSHCOG00000015738	dicer1	100	75.932	ENSCHIG00000015885	DICER1	99	76.190	Capra_hircus
ENSHCOG00000015738	dicer1	99	72.257	ENSTSYG00000002044	DICER1	99	72.309	Carlito_syrichta
ENSHCOG00000015738	dicer1	97	71.619	ENSCAPG00000000101	DICER1	98	71.673	Cavia_aperea
ENSHCOG00000015738	dicer1	100	75.337	ENSCPOG00000004221	DICER1	99	75.389	Cavia_porcellus
ENSHCOG00000015738	dicer1	100	76.139	ENSCCAG00000027063	DICER1	99	76.334	Cebus_capucinus
ENSHCOG00000015738	dicer1	100	76.087	ENSCATG00000031403	DICER1	99	76.282	Cercocebus_atys
ENSHCOG00000015738	dicer1	100	76.309	ENSCLAG00000015000	DICER1	99	76.297	Chinchilla_lanigera
ENSHCOG00000015738	dicer1	100	76.218	ENSCSAG00000010696	DICER1	99	76.413	Chlorocebus_sabaeus
ENSHCOG00000015738	dicer1	79	70.588	ENSCHOG00000002136	DICER1	89	70.588	Choloepus_hoffmanni
ENSHCOG00000015738	dicer1	100	76.112	ENSCPBG00000009859	DICER1	99	80.865	Chrysemys_picta_bellii
ENSHCOG00000015738	dicer1	78	58.095	ENSCING00000008383	-	99	43.186	Ciona_intestinalis
ENSHCOG00000015738	dicer1	53	78.571	ENSCSAVG00000006137	-	86	78.571	Ciona_savignyi
ENSHCOG00000015738	dicer1	100	76.035	ENSCANG00000031429	DICER1	99	76.230	Colobus_angolensis_palliatus
ENSHCOG00000015738	dicer1	100	76.062	ENSCGRG00001008088	Dicer1	99	76.062	Cricetulus_griseus_chok1gshd
ENSHCOG00000015738	dicer1	100	76.062	ENSCGRG00000012281	Dicer1	99	76.062	Cricetulus_griseus_crigri
ENSHCOG00000015738	dicer1	100	81.088	ENSCSEG00000017078	dicer1	100	80.960	Cynoglossus_semilaevis
ENSHCOG00000015738	dicer1	100	82.356	ENSCVAG00000020035	dicer1	100	82.515	Cyprinodon_variegatus
ENSHCOG00000015738	dicer1	100	80.021	ENSDARG00000001129	dicer1	100	80.137	Danio_rerio
ENSHCOG00000015738	dicer1	100	73.608	ENSDNOG00000004190	DICER1	99	73.918	Dasypus_novemcinctus
ENSHCOG00000015738	dicer1	99	75.896	ENSDORG00000006215	Dicer1	99	75.948	Dipodomys_ordii
ENSHCOG00000015738	dicer1	79	61.165	FBgn0039016	Dcr-1	70	61.165	Drosophila_melanogaster
ENSHCOG00000015738	dicer1	92	94.690	ENSETEG00000011000	DICER1	99	95.964	Echinops_telfairi
ENSHCOG00000015738	dicer1	91	65.205	ENSEBUG00000013802	dicer1	88	66.082	Eptatretus_burgeri
ENSHCOG00000015738	dicer1	100	76.050	ENSEASG00005021485	DICER1	99	76.269	Equus_asinus_asinus
ENSHCOG00000015738	dicer1	99	76.064	ENSECAG00000006079	DICER1	99	78.920	Equus_caballus
ENSHCOG00000015738	dicer1	57	96.269	ENSEEUG00000003893	-	55	96.269	Erinaceus_europaeus
ENSHCOG00000015738	dicer1	100	78.297	ENSELUG00000024317	dicer1	100	78.297	Esox_lucius
ENSHCOG00000015738	dicer1	95	82.546	ENSFCAG00000003535	DICER1	99	76.528	Felis_catus
ENSHCOG00000015738	dicer1	100	76.629	ENSFALG00000002516	DICER1	99	76.629	Ficedula_albicollis
ENSHCOG00000015738	dicer1	100	75.963	ENSFDAG00000021287	DICER1	99	76.042	Fukomys_damarensis
ENSHCOG00000015738	dicer1	100	78.499	ENSFHEG00000016839	dicer1	100	79.043	Fundulus_heteroclitus
ENSHCOG00000015738	dicer1	88	85.908	ENSGMOG00000006057	dicer1	89	85.366	Gadus_morhua
ENSHCOG00000015738	dicer1	91	95.122	ENSGALG00000010999	DICER1	99	95.122	Gallus_gallus
ENSHCOG00000015738	dicer1	100	82.945	ENSGAFG00000010728	dicer1	100	83.051	Gambusia_affinis
ENSHCOG00000015738	dicer1	100	81.960	ENSGACG00000020134	dicer1	100	82.063	Gasterosteus_aculeatus
ENSHCOG00000015738	dicer1	64	74.021	ENSGAGG00000016379	DICER1	99	74.980	Gopherus_agassizii
ENSHCOG00000015738	dicer1	100	76.114	ENSGGOG00000003760	DICER1	99	76.309	Gorilla_gorilla
ENSHCOG00000015738	dicer1	100	84.128	ENSHBUG00000018941	dicer1	100	84.128	Haplochromis_burtoni
ENSHCOG00000015738	dicer1	100	76.218	ENSHGLG00000018124	DICER1	99	76.062	Heterocephalus_glaber_female
ENSHCOG00000015738	dicer1	100	76.218	ENSHGLG00100010985	DICER1	99	76.062	Heterocephalus_glaber_male
ENSHCOG00000015738	dicer1	100	77.772	ENSIPUG00000005080	dicer1	100	78.594	Ictalurus_punctatus
ENSHCOG00000015738	dicer1	100	76.324	ENSSTOG00000022439	DICER1	100	76.376	Ictidomys_tridecemlineatus
ENSHCOG00000015738	dicer1	100	75.944	ENSJJAG00000010766	Dicer1	99	75.996	Jaculus_jaculus
ENSHCOG00000015738	dicer1	95	97.758	ENSKMAG00000001429	dicer1	100	97.758	Kryptolebias_marmoratus
ENSHCOG00000015738	dicer1	100	84.519	ENSLBEG00000008928	dicer1	100	84.571	Labrus_bergylta
ENSHCOG00000015738	dicer1	100	76.477	ENSLACG00000008302	DICER1	99	76.632	Latimeria_chalumnae
ENSHCOG00000015738	dicer1	100	79.251	ENSLOCG00000008544	dicer1	99	79.251	Lepisosteus_oculatus
ENSHCOG00000015738	dicer1	100	76.104	ENSLAFG00000013632	DICER1	100	76.156	Loxodonta_africana
ENSHCOG00000015738	dicer1	100	76.087	ENSMFAG00000002987	DICER1	99	76.282	Macaca_fascicularis
ENSHCOG00000015738	dicer1	100	76.087	ENSMMUG00000023305	DICER1	99	76.282	Macaca_mulatta
ENSHCOG00000015738	dicer1	100	76.087	ENSMNEG00000021073	DICER1	99	76.282	Macaca_nemestrina
ENSHCOG00000015738	dicer1	100	75.828	ENSMLEG00000034800	DICER1	99	76.230	Mandrillus_leucophaeus
ENSHCOG00000015738	dicer1	100	84.318	ENSMAMG00000016806	dicer1	100	84.318	Mastacembelus_armatus
ENSHCOG00000015738	dicer1	100	84.128	ENSMZEG00005016989	dicer1	100	84.128	Maylandia_zebra
ENSHCOG00000015738	dicer1	100	76.276	ENSMGAG00000013207	DICER1	99	76.301	Meleagris_gallopavo
ENSHCOG00000015738	dicer1	100	76.075	ENSMAUG00000009936	Dicer1	99	76.321	Mesocricetus_auratus
ENSHCOG00000015738	dicer1	100	75.541	ENSMICG00000011690	DICER1	99	76.230	Microcebus_murinus
ENSHCOG00000015738	dicer1	100	75.867	ENSMOCG00000018636	Dicer1	99	76.114	Microtus_ochrogaster
ENSHCOG00000015738	dicer1	100	82.940	ENSMMOG00000018531	dicer1	100	82.625	Mola_mola
ENSHCOG00000015738	dicer1	100	75.876	ENSMODG00000012624	DICER1	99	75.928	Monodelphis_domestica
ENSHCOG00000015738	dicer1	100	84.893	ENSMALG00000009445	dicer1	100	84.945	Monopterus_albus
ENSHCOG00000015738	dicer1	100	75.803	ENSMUSG00000041415	Dicer1	100	75.803	Mus_musculus
ENSHCOG00000015738	dicer1	100	75.998	ENSMPUG00000003130	DICER1	100	76.062	Mustela_putorius_furo
ENSHCOG00000015738	dicer1	99	75.466	ENSMLUG00000003991	DICER1	99	75.764	Myotis_lucifugus
ENSHCOG00000015738	dicer1	100	75.714	ENSNGAG00000010103	Dicer1	99	75.765	Nannospalax_galili
ENSHCOG00000015738	dicer1	98	82.204	ENSNBRG00000022306	dicer1	97	82.204	Neolamprologus_brichardi
ENSHCOG00000015738	dicer1	100	76.334	ENSNLEG00000017309	DICER1	99	76.385	Nomascus_leucogenys
ENSHCOG00000015738	dicer1	71	94.805	ENSMEUG00000000614	-	76	94.805	Notamacropus_eugenii
ENSHCOG00000015738	dicer1	96	92.857	ENSOPRG00000014698	DICER1	95	92.857	Ochotona_princeps
ENSHCOG00000015738	dicer1	100	76.321	ENSODEG00000008594	DICER1	99	76.361	Octodon_degus
ENSHCOG00000015738	dicer1	100	83.135	ENSONIG00000010424	dicer1	99	83.187	Oreochromis_niloticus
ENSHCOG00000015738	dicer1	100	75.992	ENSOANG00000012034	DICER1	99	76.043	Ornithorhynchus_anatinus
ENSHCOG00000015738	dicer1	100	74.743	ENSOCUG00000010849	DICER1	99	74.961	Oryctolagus_cuniculus
ENSHCOG00000015738	dicer1	100	82.691	ENSORLG00000011022	dicer1	98	86.387	Oryzias_latipes
ENSHCOG00000015738	dicer1	100	82.657	ENSORLG00020021795	dicer1	98	86.562	Oryzias_latipes_hni
ENSHCOG00000015738	dicer1	100	82.409	ENSORLG00015019667	dicer1	100	82.850	Oryzias_latipes_hsok
ENSHCOG00000015738	dicer1	100	82.646	ENSOMEG00000018679	dicer1	100	83.025	Oryzias_melastigma
ENSHCOG00000015738	dicer1	93	74.224	ENSOGAG00000010719	DICER1	97	74.625	Otolemur_garnettii
ENSHCOG00000015738	dicer1	100	75.776	ENSOARG00000015465	DICER1	99	76.035	Ovis_aries
ENSHCOG00000015738	dicer1	100	76.010	ENSPPAG00000035143	DICER1	99	76.205	Pan_paniscus
ENSHCOG00000015738	dicer1	100	76.528	ENSPPRG00000001322	DICER1	99	76.632	Panthera_pardus
ENSHCOG00000015738	dicer1	100	76.398	ENSPTIG00000008215	DICER1	99	76.501	Panthera_tigris_altaica
ENSHCOG00000015738	dicer1	100	76.114	ENSPTRG00000023484	DICER1	99	76.309	Pan_troglodytes
ENSHCOG00000015738	dicer1	100	76.035	ENSPANG00000023078	DICER1	99	76.230	Papio_anubis
ENSHCOG00000015738	dicer1	100	78.583	ENSPKIG00000019962	dicer1	99	78.583	Paramormyrops_kingsleyae
ENSHCOG00000015738	dicer1	100	74.987	ENSPSIG00000010801	DICER1	99	75.039	Pelodiscus_sinensis
ENSHCOG00000015738	dicer1	100	83.563	ENSPMGG00000010210	dicer1	100	83.563	Periophthalmus_magnuspinnatus
ENSHCOG00000015738	dicer1	100	75.907	ENSPEMG00000014125	Dicer1	99	75.907	Peromyscus_maniculatus_bairdii
ENSHCOG00000015738	dicer1	100	76.035	ENSPCIG00000018004	DICER1	99	75.915	Phascolarctos_cinereus
ENSHCOG00000015738	dicer1	100	82.524	ENSPFOG00000008531	dicer1	100	82.629	Poecilia_formosa
ENSHCOG00000015738	dicer1	99	82.462	ENSPLAG00000008539	dicer1	99	82.567	Poecilia_latipinna
ENSHCOG00000015738	dicer1	100	82.682	ENSPMEG00000014284	dicer1	100	82.788	Poecilia_mexicana
ENSHCOG00000015738	dicer1	100	82.154	ENSPREG00000012120	dicer1	100	82.260	Poecilia_reticulata
ENSHCOG00000015738	dicer1	100	76.139	ENSPPYG00000006112	DICER1	99	76.334	Pongo_abelii
ENSHCOG00000015738	dicer1	85	78.523	ENSPCAG00000010828	DICER1	83	79.362	Procavia_capensis
ENSHCOG00000015738	dicer1	100	76.282	ENSPCOG00000022909	DICER1	99	76.489	Propithecus_coquereli
ENSHCOG00000015738	dicer1	98	69.186	ENSPVAG00000004811	DICER1	100	69.503	Pteropus_vampyrus
ENSHCOG00000015738	dicer1	100	84.075	ENSPNYG00000017939	dicer1	100	84.075	Pundamilia_nyererei
ENSHCOG00000015738	dicer1	100	79.937	ENSPNAG00000001012	dicer1	100	80.042	Pygocentrus_nattereri
ENSHCOG00000015738	dicer1	100	75.714	ENSRNOG00000010711	Dicer1	99	75.714	Rattus_norvegicus
ENSHCOG00000015738	dicer1	99	76.153	ENSRBIG00000020932	DICER1	99	76.349	Rhinopithecus_bieti
ENSHCOG00000015738	dicer1	99	76.153	ENSRROG00000031891	DICER1	99	76.349	Rhinopithecus_roxellana
ENSHCOG00000015738	dicer1	100	76.087	ENSSBOG00000028660	DICER1	99	76.282	Saimiri_boliviensis_boliviensis
ENSHCOG00000015738	dicer1	100	76.087	ENSSHAG00000012077	DICER1	99	76.087	Sarcophilus_harrisii
ENSHCOG00000015738	dicer1	100	79.199	ENSSFOG00015010804	dicer1	98	85.663	Scleropages_formosus
ENSHCOG00000015738	dicer1	100	83.952	ENSSMAG00000015520	dicer1	100	84.197	Scophthalmus_maximus
ENSHCOG00000015738	dicer1	100	85.482	ENSSDUG00000021652	dicer1	100	85.482	Seriola_dumerili
ENSHCOG00000015738	dicer1	100	81.487	ENSSLDG00000012087	dicer1	100	81.593	Seriola_lalandi_dorsalis
ENSHCOG00000015738	dicer1	61	87.719	ENSSARG00000000219	-	60	84.798	Sorex_araneus
ENSHCOG00000015738	dicer1	100	75.722	ENSSPUG00000016222	DICER1	99	75.876	Sphenodon_punctatus
ENSHCOG00000015738	dicer1	100	83.815	ENSSPAG00000017128	dicer1	99	83.920	Stegastes_partitus
ENSHCOG00000015738	dicer1	100	76.351	ENSSSCG00000028225	DICER1	99	77.660	Sus_scrofa
ENSHCOG00000015738	dicer1	100	76.422	ENSTGUG00000012658	DICER1	99	76.422	Taeniopygia_guttata
ENSHCOG00000015738	dicer1	99	82.020	ENSTRUG00000006156	dicer1	99	82.073	Takifugu_rubripes
ENSHCOG00000015738	dicer1	100	81.657	ENSTNIG00000005441	dicer1	99	81.761	Tetraodon_nigroviridis
ENSHCOG00000015738	dicer1	95	71.156	ENSTBEG00000012374	DICER1	99	71.382	Tupaia_belangeri
ENSHCOG00000015738	dicer1	94	76.471	ENSTTRG00000013044	DICER1	94	76.471	Tursiops_truncatus
ENSHCOG00000015738	dicer1	97	75.573	ENSUAMG00000011912	DICER1	99	75.680	Ursus_americanus
ENSHCOG00000015738	dicer1	100	76.151	ENSUMAG00000003027	DICER1	100	76.203	Ursus_maritimus
ENSHCOG00000015738	dicer1	95	76.948	ENSVPAG00000006817	DICER1	94	76.948	Vicugna_pacos
ENSHCOG00000015738	dicer1	100	76.010	ENSVVUG00000018855	DICER1	99	76.114	Vulpes_vulpes
ENSHCOG00000015738	dicer1	100	74.688	ENSXETG00000023315	dicer1	99	74.844	Xenopus_tropicalis
ENSHCOG00000015738	dicer1	93	96.035	ENSXCOG00000009353	dicer1	100	96.035	Xiphophorus_couchianus
ENSHCOG00000015738	dicer1	100	82.427	ENSXMAG00000015721	dicer1	100	82.648	Xiphophorus_maculatus