EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000015800 (Gene tree)
Gene ID: 109525538
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10137 bases
Position: chrKV880244.1:1100261-1110397
Accession: 109525538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000025565	zf-CCCH	PF00642.24	4.1e-19	1	2
ENSHCOP00000025565	zf-CCCH	PF00642.24	4.1e-19	2	2
ENSHCOP00000012736	zf-CCCH	PF00642.24	4.1e-19	1	2
ENSHCOP00000012736	zf-CCCH	PF00642.24	4.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000027048	-	1732	-	ENSHCOP00000025565	421 (aa)	-	-
ENSHCOT00000019863	-	1787	XM_019886104	ENSHCOP00000012736	419 (aa)	XP_019741663	UPI00094F2B79

Gene Model

Click here to download ENSHCOG00000015800's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000015800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000015800	zgc:114130	55	36.052	ENSHCOG00000012747	zfp36l1b	94	34.599

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000015800	zgc:114130	98	62.100	ENSAPOG00000014912	zgc:114130	100	61.872	Acanthochromis_polyacanthus
ENSHCOG00000015800	zgc:114130	81	62.079	ENSACIG00000017364	zgc:114130	99	63.408	Amphilophus_citrinellus
ENSHCOG00000015800	zgc:114130	63	37.966	ENSACIG00000009027	sb:cb81	73	37.994	Amphilophus_citrinellus
ENSHCOG00000015800	zgc:114130	98	61.416	ENSAOCG00000022227	zgc:114130	100	61.644	Amphiprion_ocellaris
ENSHCOG00000015800	zgc:114130	56	42.400	ENSAOCG00000002001	zgc:162730	55	41.107	Amphiprion_ocellaris
ENSHCOG00000015800	zgc:114130	56	42.400	ENSAPEG00000015490	zgc:162730	57	41.107	Amphiprion_percula
ENSHCOG00000015800	zgc:114130	98	62.100	ENSAPEG00000015497	zgc:114130	100	62.557	Amphiprion_percula
ENSHCOG00000015800	zgc:114130	98	61.872	ENSATEG00000008781	zgc:114130	100	62.329	Anabas_testudineus
ENSHCOG00000015800	zgc:114130	63	38.983	ENSATEG00000003462	sb:cb81	72	37.798	Anabas_testudineus
ENSHCOG00000015800	zgc:114130	71	39.490	ENSACLG00000022112	zgc:162730	55	42.857	Astatotilapia_calliptera
ENSHCOG00000015800	zgc:114130	98	58.411	ENSACLG00000022113	zgc:114130	100	60.839	Astatotilapia_calliptera
ENSHCOG00000015800	zgc:114130	63	38.889	ENSACLG00000013759	sb:cb81	73	38.769	Astatotilapia_calliptera
ENSHCOG00000015800	zgc:114130	70	38.462	ENSAMXG00000034874	sb:cb81	73	38.816	Astyanax_mexicanus
ENSHCOG00000015800	zgc:114130	98	41.002	ENSAMXG00000038581	zgc:114130	96	42.757	Astyanax_mexicanus
ENSHCOG00000015800	zgc:114130	98	57.991	ENSCSEG00000018290	zgc:114130	100	57.534	Cynoglossus_semilaevis
ENSHCOG00000015800	zgc:114130	54	42.017	ENSCSEG00000018283	zgc:162730	59	40.000	Cynoglossus_semilaevis
ENSHCOG00000015800	zgc:114130	61	39.785	ENSCVAG00000009207	sb:cb81	73	40.498	Cyprinodon_variegatus
ENSHCOG00000015800	zgc:114130	96	53.440	ENSCVAG00000018574	zgc:114130	100	53.488	Cyprinodon_variegatus
ENSHCOG00000015800	zgc:114130	96	36.493	ENSDARG00000040503	sb:cb81	77	39.414	Danio_rerio
ENSHCOG00000015800	zgc:114130	97	46.062	ENSDARG00000040725	zgc:114130	96	45.324	Danio_rerio
ENSHCOG00000015800	zgc:114130	97	49.417	ENSELUG00000013151	zgc:114130	98	48.605	Esox_lucius
ENSHCOG00000015800	zgc:114130	96	35.697	ENSELUG00000013045	sb:cb81	100	36.516	Esox_lucius
ENSHCOG00000015800	zgc:114130	96	51.843	ENSFHEG00000000656	zgc:114130	100	53.899	Fundulus_heteroclitus
ENSHCOG00000015800	zgc:114130	62	39.161	ENSFHEG00000022187	sb:cb81	100	36.444	Fundulus_heteroclitus
ENSHCOG00000015800	zgc:114130	74	37.249	ENSFHEG00000013710	zgc:162730	57	39.382	Fundulus_heteroclitus
ENSHCOG00000015800	zgc:114130	75	57.012	ENSGMOG00000017223	zgc:114130	99	57.317	Gadus_morhua
ENSHCOG00000015800	zgc:114130	76	60.355	ENSGAFG00000009949	zgc:114130	91	61.243	Gambusia_affinis
ENSHCOG00000015800	zgc:114130	61	38.521	ENSGAFG00000015700	sb:cb81	69	37.722	Gambusia_affinis
ENSHCOG00000015800	zgc:114130	53	41.423	ENSGAFG00000009953	zgc:162730	57	39.526	Gambusia_affinis
ENSHCOG00000015800	zgc:114130	76	66.265	ENSGACG00000008344	zgc:114130	100	67.372	Gasterosteus_aculeatus
ENSHCOG00000015800	zgc:114130	63	38.176	ENSHBUG00000002383	sb:cb81	73	38.415	Haplochromis_burtoni
ENSHCOG00000015800	zgc:114130	71	39.490	ENSHBUG00000015057	zgc:162730	55	42.857	Haplochromis_burtoni
ENSHCOG00000015800	zgc:114130	98	58.411	ENSHBUG00000015051	zgc:114130	100	60.839	Haplochromis_burtoni
ENSHCOG00000015800	zgc:114130	65	38.028	ENSIPUG00000011378	sb:cb81	75	39.100	Ictalurus_punctatus
ENSHCOG00000015800	zgc:114130	62	43.182	ENSIPUG00000018248	zgc:162730	69	44.106	Ictalurus_punctatus
ENSHCOG00000015800	zgc:114130	96	40.931	ENSIPUG00000018256	zgc:114130	79	41.889	Ictalurus_punctatus
ENSHCOG00000015800	zgc:114130	80	37.571	ENSKMAG00000013156	zfp36l1a	84	36.390	Kryptolebias_marmoratus
ENSHCOG00000015800	zgc:114130	98	58.957	ENSKMAG00000019287	zgc:114130	100	58.636	Kryptolebias_marmoratus
ENSHCOG00000015800	zgc:114130	56	40.637	ENSKMAG00000019277	zgc:162730	55	39.759	Kryptolebias_marmoratus
ENSHCOG00000015800	zgc:114130	96	58.645	ENSLBEG00000018387	zgc:114130	99	59.813	Labrus_bergylta
ENSHCOG00000015800	zgc:114130	96	40.098	ENSLACG00000015732	sb:cb81	100	38.313	Latimeria_chalumnae
ENSHCOG00000015800	zgc:114130	62	38.929	ENSLACG00000012879	-	68	40.942	Latimeria_chalumnae
ENSHCOG00000015800	zgc:114130	79	36.023	ENSLACG00000015980	-	69	38.846	Latimeria_chalumnae
ENSHCOG00000015800	zgc:114130	96	37.470	ENSLOCG00000014587	sb:cb81	100	36.591	Lepisosteus_oculatus
ENSHCOG00000015800	zgc:114130	100	63.348	ENSMAMG00000007511	zgc:114130	100	62.358	Mastacembelus_armatus
ENSHCOG00000015800	zgc:114130	71	39.869	ENSMZEG00005014415	zgc:162730	57	43.852	Maylandia_zebra
ENSHCOG00000015800	zgc:114130	98	58.645	ENSMZEG00005014410	zgc:114130	100	61.072	Maylandia_zebra
ENSHCOG00000015800	zgc:114130	63	38.889	ENSMZEG00005016001	-	72	38.769	Maylandia_zebra
ENSHCOG00000015800	zgc:114130	63	38.754	ENSMZEG00005024684	sb:cb81	73	38.650	Maylandia_zebra
ENSHCOG00000015800	zgc:114130	81	66.102	ENSMMOG00000011504	zgc:114130	97	67.416	Mola_mola
ENSHCOG00000015800	zgc:114130	71	39.490	ENSNBRG00000013701	zgc:162730	55	42.857	Neolamprologus_brichardi
ENSHCOG00000015800	zgc:114130	78	61.834	ENSNBRG00000013703	zgc:114130	97	63.018	Neolamprologus_brichardi
ENSHCOG00000015800	zgc:114130	63	40.727	ENSNBRG00000006231	sb:cb81	71	38.907	Neolamprologus_brichardi
ENSHCOG00000015800	zgc:114130	63	38.255	ENSONIG00000001259	sb:cb81	73	39.024	Oreochromis_niloticus
ENSHCOG00000015800	zgc:114130	76	62.651	ENSONIG00000005004	zgc:114130	100	63.690	Oreochromis_niloticus
ENSHCOG00000015800	zgc:114130	66	37.847	ENSORLG00000024026	sb:cb81	62	40.461	Oryzias_latipes
ENSHCOG00000015800	zgc:114130	65	38.246	ENSORLG00020021084	sb:cb81	72	40.532	Oryzias_latipes_hni
ENSHCOG00000015800	zgc:114130	65	38.246	ENSORLG00015010105	sb:cb81	72	37.742	Oryzias_latipes_hsok
ENSHCOG00000015800	zgc:114130	61	37.269	ENSOMEG00000020565	sb:cb81	73	38.870	Oryzias_melastigma
ENSHCOG00000015800	zgc:114130	62	36.949	ENSOMEG00000017752	zgc:162730	63	36.396	Oryzias_melastigma
ENSHCOG00000015800	zgc:114130	96	55.631	ENSPFOG00000003653	zgc:114130	100	62.011	Poecilia_formosa
ENSHCOG00000015800	zgc:114130	70	36.076	ENSPFOG00000003665	zgc:162730	72	40.392	Poecilia_formosa
ENSHCOG00000015800	zgc:114130	96	56.109	ENSPLAG00000000947	zgc:114130	100	57.604	Poecilia_latipinna
ENSHCOG00000015800	zgc:114130	96	55.631	ENSPMEG00000015335	zgc:114130	100	56.751	Poecilia_mexicana
ENSHCOG00000015800	zgc:114130	70	36.076	ENSPMEG00000000341	zgc:162730	57	40.392	Poecilia_mexicana
ENSHCOG00000015800	zgc:114130	64	38.235	ENSPREG00000017495	sb:cb81	69	38.567	Poecilia_reticulata
ENSHCOG00000015800	zgc:114130	70	35.604	ENSPREG00000021263	zgc:162730	57	40.000	Poecilia_reticulata
ENSHCOG00000015800	zgc:114130	96	58.391	ENSPREG00000021254	zgc:114130	100	58.391	Poecilia_reticulata
ENSHCOG00000015800	zgc:114130	98	58.782	ENSPNYG00000015546	zgc:114130	100	61.072	Pundamilia_nyererei
ENSHCOG00000015800	zgc:114130	63	39.033	ENSPNYG00000007502	sb:cb81	71	37.898	Pundamilia_nyererei
ENSHCOG00000015800	zgc:114130	71	39.490	ENSPNYG00000015553	zgc:162730	55	42.857	Pundamilia_nyererei
ENSHCOG00000015800	zgc:114130	63	41.199	ENSPNAG00000000386	zfp36l1b	64	41.379	Pygocentrus_nattereri
ENSHCOG00000015800	zgc:114130	74	43.711	ENSPNAG00000030063	sb:cb81	76	44.025	Pygocentrus_nattereri
ENSHCOG00000015800	zgc:114130	98	38.118	ENSPNAG00000023029	zgc:114130	97	40.515	Pygocentrus_nattereri
ENSHCOG00000015800	zgc:114130	96	59.535	ENSSMAG00000018621	zgc:114130	95	59.535	Scophthalmus_maximus
ENSHCOG00000015800	zgc:114130	65	37.540	ENSSDUG00000004426	sb:cb81	73	37.764	Seriola_dumerili
ENSHCOG00000015800	zgc:114130	96	63.573	ENSSDUG00000002237	zgc:114130	100	63.805	Seriola_dumerili
ENSHCOG00000015800	zgc:114130	65	36.928	ENSSLDG00000018035	sb:cb81	73	39.329	Seriola_lalandi_dorsalis
ENSHCOG00000015800	zgc:114130	96	63.721	ENSSLDG00000008496	zgc:114130	100	63.721	Seriola_lalandi_dorsalis
ENSHCOG00000015800	zgc:114130	62	36.882	ENSSLDG00000011048	zfp36l1b	61	38.023	Seriola_lalandi_dorsalis
ENSHCOG00000015800	zgc:114130	56	42.169	ENSSPAG00000006851	zgc:162730	55	41.434	Stegastes_partitus
ENSHCOG00000015800	zgc:114130	98	62.299	ENSSPAG00000006856	zgc:114130	100	62.529	Stegastes_partitus
ENSHCOG00000015800	zgc:114130	98	58.701	ENSTRUG00000022473	zgc:114130	100	59.861	Takifugu_rubripes
ENSHCOG00000015800	zgc:114130	62	39.852	ENSTRUG00000020720	sb:cb81	53	44.000	Takifugu_rubripes
ENSHCOG00000015800	zgc:114130	81	52.326	ENSXCOG00000012792	zgc:114130	88	53.198	Xiphophorus_couchianus
ENSHCOG00000015800	zgc:114130	62	38.760	ENSXMAG00000004681	sb:cb81	69	37.943	Xiphophorus_maculatus
ENSHCOG00000015800	zgc:114130	96	55.275	ENSXMAG00000026836	zgc:114130	100	56.813	Xiphophorus_maculatus